Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:24:16 (1138): wrapper (7.7.26015): starting
10:24:16 (1138): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 10:24:16] Arguments: --nthreads 12
[2025-11-24 10:24:16] Threads: 12
[2025-11-24 10:24:16] Checking for CVMFS
[2025-11-24 10:24:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 10:24:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 10:24:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 10:24:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 10:24:16] 2.11.2.0 25590 185659 92256 153250 1 81 14591069 20275201 1 130560 2 97905521 99.967 7379149 25556 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 10:24:16] CVMFS is ok
[2025-11-24 10:24:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 10:24:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 10:24:16] Further information can be found at the LHC@home message board.
[2025-11-24 10:24:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 10:24:16] Checking for apptainer binary...
[2025-11-24 10:24:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 10:24:16] Running /usr/bin/apptainer --version
[2025-11-24 10:24:16] apptainer version 1.3.2-1.el7
[2025-11-24 10:24:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 10:24:18] c-205-24.aglt2.org
[2025-11-24 10:24:18] apptainer works
[2025-11-24 10:24:18] Set ATHENA_PROC_NUMBER=12
[2025-11-24 10:24:18] Set ATHENA_CORE_NUMBER=12
[2025-11-24 10:24:18] Starting ATLAS job with PandaID=6895365649
[2025-11-24 10:24:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:35:21]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:35:21] 2025-11-24 22:34:29,898 | INFO     | time since job start (25796s) is within the limit (172800.0s)
[2025-11-24 17:35:21] 2025-11-24 22:34:31,408 | INFO     | monitor loop #1934: job 0:6895365649 is in state 'finished'
[2025-11-24 17:35:21] 2025-11-24 22:34:31,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:35:21] 2025-11-24 22:34:31,903 | INFO     | time since job start (25798s) is within the limit (172800.0s)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,646 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:35:21] 2025-11-24 22:34:33,649 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-11-24 17:35:21] 2025-11-24 22:34:33,651 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895365649/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,652 | INFO     | extracted standard info from prmon json
[2025-11-24 17:35:21] 2025-11-24 22:34:33,652 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:35:21] 2025-11-24 22:34:33,652 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:35:21] 2025-11-24 22:34:33,659 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:35:21] 2025-11-24 22:34:33,659 | INFO     | sum of square deviations: 23469077609.664364
[2025-11-24 17:35:21] 2025-11-24 22:34:33,663 | INFO     | sum of deviations: 313617581017.87726
[2025-11-24 17:35:21] 2025-11-24 22:34:33,663 | INFO     | mean x: 1764010774.2245862
[2025-11-24 17:35:21] 2025-11-24 22:34:33,663 | INFO     | mean y: 3431803.0118203308
[2025-11-24 17:35:21] 2025-11-24 22:34:33,663 | INFO     | intersect: -23569066490.401054
[2025-11-24 17:35:21] 2025-11-24 22:34:33,664 | INFO     | chi2: 5.9475661711088215
[2025-11-24 17:35:21] 2025-11-24 22:34:33,664 | INFO     | sum of square deviations: 22646663256.9091
[2025-11-24 17:35:21] 2025-11-24 22:34:33,668 | INFO     | sum of deviations: 485853336878.45447
[2025-11-24 17:35:21] 2025-11-24 22:34:33,668 | INFO     | mean x: 1764010621.7272727
[2025-11-24 17:35:21] 2025-11-24 22:34:33,668 | INFO     | mean y: 3463712.54784689
[2025-11-24 17:35:21] 2025-11-24 22:34:33,669 | INFO     | intersect: -37840983265.474915
[2025-11-24 17:35:21] 2025-11-24 22:34:33,669 | INFO     | chi2: 2.6168250452154274
[2025-11-24 17:35:21] 2025-11-24 22:34:33,669 | INFO     | current chi2=2.6168250452154274 (change=56.001749792595156 %)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,670 | INFO     | sum of square deviations: 21843691129.147697
[2025-11-24 17:35:21] 2025-11-24 22:34:33,673 | INFO     | sum of deviations: 521406372620.14484
[2025-11-24 17:35:21] 2025-11-24 22:34:33,674 | INFO     | mean x: 1764010469.230024
[2025-11-24 17:35:21] 2025-11-24 22:34:33,674 | INFO     | mean y: 3470424.4721549638
[2025-11-24 17:35:21] 2025-11-24 22:34:33,674 | INFO     | intersect: -42103254789.10095
[2025-11-24 17:35:21] 2025-11-24 22:34:33,674 | INFO     | chi2: 2.2886971692866838
[2025-11-24 17:35:21] 2025-11-24 22:34:33,674 | INFO     | current chi2=2.2886971692866838 (change=12.53915986965536 %)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,675 | INFO     | right removable region: 412
[2025-11-24 17:35:21] 2025-11-24 22:34:33,675 | INFO     | sum of square deviations: 22646630865.361313
[2025-11-24 17:35:21] 2025-11-24 22:34:33,679 | INFO     | sum of deviations: 184661189184.42108
[2025-11-24 17:35:21] 2025-11-24 22:34:33,679 | INFO     | mean x: 1764010926.7248805
[2025-11-24 17:35:21] 2025-11-24 22:34:33,679 | INFO     | mean y: 3455627.4210526315
[2025-11-24 17:35:21] 2025-11-24 22:34:33,679 | INFO     | intersect: -14380333175.423111
[2025-11-24 17:35:21] 2025-11-24 22:34:33,680 | INFO     | chi2: 3.8102687381089506
[2025-11-24 17:35:21] 2025-11-24 22:34:33,680 | INFO     | current chi2=3.8102687381089506 (change=35.935664631729665 %)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,680 | INFO     | sum of square deviations: 21843626590.058094
[2025-11-24 17:35:21] 2025-11-24 22:34:33,684 | INFO     | sum of deviations: 151025206366.0775
[2025-11-24 17:35:21] 2025-11-24 22:34:33,684 | INFO     | mean x: 1764011079.2251816
[2025-11-24 17:35:21] 2025-11-24 22:34:33,684 | INFO     | mean y: 3462009.3002421306
[2025-11-24 17:35:21] 2025-11-24 22:34:33,684 | INFO     | intersect: -12192779131.046116
[2025-11-24 17:35:21] 2025-11-24 22:34:33,685 | INFO     | chi2: 3.745311746772406
[2025-11-24 17:35:21] 2025-11-24 22:34:33,685 | INFO     | current chi2=3.745311746772406 (change=1.7047876620057725 %)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,685 | INFO     | left removable region: 20
[2025-11-24 17:35:21] 2025-11-24 22:34:33,685 | INFO     | sum of square deviations: 18678137788.87498
[2025-11-24 17:35:21] 2025-11-24 22:34:33,689 | INFO     | sum of deviations: 317134631557.5356
[2025-11-24 17:35:21] 2025-11-24 22:34:33,689 | INFO     | mean x: 1764011048.732143
[2025-11-24 17:35:21] 2025-11-24 22:34:33,689 | INFO     | mean y: 3509895.2908163266
[2025-11-24 17:35:21] 2025-11-24 22:34:33,689 | INFO     | intersect: -29947494874.376083
[2025-11-24 17:35:21] 2025-11-24 22:34:33,690 | INFO     | chi2: 0.02582543776394505
[2025-11-24 17:35:21] 2025-11-24 22:34:33,690 | INFO     | current memory leak: 16.98 B/s (using 392 data points, chi2=0.03)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,690 | INFO     | could have reported an average CPU frequency of 2419 MHz (18 samples)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,690 | INFO     | ..............................
[2025-11-24 17:35:21] 2025-11-24 22:34:33,690 | INFO     | . Timing measurements:
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . get job = 0 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . initial setup = 2 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . payload setup = 7 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . stage-in = 0 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . payload execution = 25763 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . stage-out = 3 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | . log creation = 0 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,691 | INFO     | ..............................
[2025-11-24 17:35:21] 2025-11-24 22:34:33,772 | INFO     | 
[2025-11-24 17:35:21] 2025-11-24 22:34:33,772 | INFO     | job summary report
[2025-11-24 17:35:21] 2025-11-24 22:34:33,773 | INFO     | --------------------------------------------------
[2025-11-24 17:35:21] 2025-11-24 22:34:33,773 | INFO     | PanDA job id: 6895365649
[2025-11-24 17:35:21] 2025-11-24 22:34:33,773 | INFO     | task id: 47556137
[2025-11-24 17:35:21] 2025-11-24 22:34:33,773 | INFO     | errors: (none)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,773 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:35:21] 2025-11-24 22:34:33,773 | INFO     | pilot state: finished 
[2025-11-24 17:35:21] 2025-11-24 22:34:33,774 | INFO     | transexitcode: 0
[2025-11-24 17:35:21] 2025-11-24 22:34:33,774 | INFO     | exeerrorcode: 0
[2025-11-24 17:35:21] 2025-11-24 22:34:33,774 | INFO     | exeerrordiag: 
[2025-11-24 17:35:21] 2025-11-24 22:34:33,774 | INFO     | exitcode: 0
[2025-11-24 17:35:21] 2025-11-24 22:34:33,774 | INFO     | exitmsg: OK
[2025-11-24 17:35:21] 2025-11-24 22:34:33,774 | INFO     | cpuconsumptiontime: 296464 s
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | nevents: 1000
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | neventsw: 0
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | pid: 11379
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | pgrp: 11379
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | corecount: 12
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | event service: False
[2025-11-24 17:35:21] 2025-11-24 22:34:33,775 | INFO     | sizes: {0: 2284309, 1: 2284309, 5: 2284599, 11: 2284655, 25774: 2321893, 25775: 2321892, 25778: 2331126, 25784: 2331316}
[2025-11-24 17:35:21] 2025-11-24 22:34:33,776 | INFO     | --------------------------------------------------
[2025-11-24 17:35:21] 2025-11-24 22:34:33,776 | INFO     | 
[2025-11-24 17:35:21] 2025-11-24 22:34:33,776 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:35:21] 2025-11-24 22:34:33,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,801 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,801 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,801 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,804 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,804 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:35:21] 2025-11-24 22:34:33,804 | INFO     | job 6895365649 has completed (purged errors)
[2025-11-24 17:35:21] 2025-11-24 22:34:33,805 | INFO     | overall cleanup function is called
[2025-11-24 17:35:21] 2025-11-24 22:34:34,821 | INFO     | --- collectZombieJob: --- 10, [11379]
[2025-11-24 17:35:21] 2025-11-24 22:34:34,821 | INFO     | zombie collector waiting for pid 11379
[2025-11-24 17:35:21] 2025-11-24 22:34:34,822 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:35:21] 2025-11-24 22:34:34,822 | INFO     | collected zombie processes
[2025-11-24 17:35:21] 2025-11-24 22:34:34,822 | INFO     | will attempt to kill all subprocesses of pid=11379
[2025-11-24 17:35:21] 2025-11-24 22:34:34,914 | INFO     | process IDs to be killed: [11379] (in reverse order)
[2025-11-24 17:35:21] 2025-11-24 22:34:34,964 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:35:21] 2025-11-24 22:34:34,965 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:35:21] 2025-11-24 22:34:34,968 | INFO     | did not find any defunct processes belonging to 11379
[2025-11-24 17:35:21] 2025-11-24 22:34:34,971 | INFO     | did not find any defunct processes belonging to 11379
[2025-11-24 17:35:21] 2025-11-24 22:34:34,973 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:35:21] 2025-11-24 22:34:34,973 | INFO     | ready for new job
[2025-11-24 17:35:21] 2025-11-24 22:34:34,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:35:21] 2025-11-24 22:34:34,975 | INFO     | ***************************************
[2025-11-24 17:35:21] 2025-11-24 22:34:34,975 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:35:21] 2025-11-24 22:34:34,975 | INFO     | ***************************************
[2025-11-24 17:35:21] 2025-11-24 22:34:34,976 | INFO     | 
[2025-11-24 17:35:21] 2025-11-24 22:34:34,976 | INFO     | architecture information:
[2025-11-24 17:35:21] 2025-11-24 22:34:34,977 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:35:21] 2025-11-24 22:34:34,992 | INFO     | cat /etc/os-release:
[2025-11-24 17:35:21] NAME="CentOS Linux"
[2025-11-24 17:35:21] VERSION="7 (Core)"
[2025-11-24 17:35:21] ID="centos"
[2025-11-24 17:35:21] ID_LIKE="rhel fedora"
[2025-11-24 17:35:21] VERSION_ID="7"
[2025-11-24 17:35:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:35:21] ANSI_COLOR="0;31"
[2025-11-24 17:35:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:35:21] HOME_URL="https://www.centos.org/"
[2025-11-24 17:35:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:35:21] 
[2025-11-24 17:35:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:35:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:35:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:35:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:35:21] 
[2025-11-24 17:35:21] 2025-11-24 22:34:34,992 | INFO     | ***************************************
[2025-11-24 17:35:21] 2025-11-24 22:34:35,495 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:35:21] 2025-11-24 22:34:35,513 | INFO     | sufficient remaining disk space (28244443136 B)
[2025-11-24 17:35:21] 2025-11-24 22:34:35,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:35:21] 2025-11-24 22:34:35,513 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:35:21] 2025-11-24 22:34:35,513 | INFO     | update_server=False
[2025-11-24 17:35:21] 2025-11-24 22:34:35,514 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:35:21] 2025-11-24 22:34:35,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:35:21] 2025-11-24 22:34:35,514 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:35:21] 2025-11-24 22:34:35,515 | INFO     | aborting loop
[2025-11-24 17:35:21] 2025-11-24 22:34:35,578 | INFO     | all job control threads have been joined
[2025-11-24 17:35:21] 2025-11-24 22:34:35,682 | INFO     | all data control threads have been joined
[2025-11-24 17:35:21] 2025-11-24 22:34:36,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:35:21] 2025-11-24 22:34:36,132 | INFO     | all payload control threads have been joined
[2025-11-24 17:35:21] 2025-11-24 22:34:36,519 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,520 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,521 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,583 | INFO     | [job] control thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,652 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,655 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,688 | INFO     | [data] control thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:36,903 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:37,137 | INFO     | [payload] control thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:37,238 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:37,259 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:37,630 | INFO     | [job] validate thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:37,948 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:37,962 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:38,076 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:34:38,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:35:21] 2025-11-24 22:34:42,658 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:35:21] 2025-11-24 22:35:05,109 | INFO     | PID=4989 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 17:35:21] 2025-11-24 22:35:05,110 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:35:21] 2025-11-24 22:35:05,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:35:21] 2025-11-24 22:35:05,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:35:21] 2025-11-24 22:35:15,664 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:35:21] 2025-11-24 22:35:15,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900937484096)>', '<ExcThread(monitor, started 139900363990784)>']
[2025-11-24 17:35:21] 2025-11-24 22:35:16,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:35:21] 2025-11-24 22:35:16,159 | INFO     | [monitor] control thread has ended
[2025-11-24 17:35:21] 2025-11-24 22:35:20,910 | INFO     | all workflow threads have been joined
[2025-11-24 17:35:21] 2025-11-24 22:35:20,910 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:35:21] 2025-11-24 22:35:20,911 | INFO     | traces error code: 0
[2025-11-24 17:35:21] 2025-11-24 22:35:20,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:35:21] 2025-11-24 22:35:21,002 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:35:21] 2025-11-24 22:35:21,006 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:35:21] 2025-11-24 22:35:21,010 [wrapper] pilotpid: 4989
[2025-11-24 17:35:21] 2025-11-24 22:35:21,014 [wrapper] Pilot exit status: 0
[2025-11-24 17:35:21] 2025-11-24 22:35:21,028 [wrapper] pandaids: 6895365649
[2025-11-24 17:35:21] 2025-11-24 22:35:21,074 [wrapper] cleanup supervisor_pilot 16961 4990
[2025-11-24 17:35:21] 2025-11-24 22:35:21,078 [wrapper] Test setup, not cleaning
[2025-11-24 17:35:21] 2025-11-24 22:35:21,082 [wrapper] apfmon messages muted
[2025-11-24 17:35:21] 2025-11-24 22:35:21,086 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:35:21] 2025-11-24 22:35:21,090 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:35:21]  *** Error codes and diagnostics ***
[2025-11-24 17:35:21]     "exeErrorCode": 0,
[2025-11-24 17:35:21]     "exeErrorDiag": "",
[2025-11-24 17:35:21]     "pilotErrorCode": 0,
[2025-11-24 17:35:21]     "pilotErrorDiag": "",
[2025-11-24 17:35:21]  *** Listing of results directory ***
[2025-11-24 17:35:21] total 1313912
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-24 17:35:21] -rwx------ 1 boincer umatlas     36292 Nov 23 12:29 runpilot2-wrapper.sh
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:29 queuedata.json
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas       100 Nov 24 10:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:35:21] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 10:24 run_atlas
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas       105 Nov 24 10:24 job.xml
[2025-11-24 17:35:21] -rw-r--r-- 2 boincer umatlas 409873583 Nov 24 10:24 EVNT.47483658._000827.pool.root.1
[2025-11-24 17:35:21] drwxrwx--x 2 boincer umatlas      4096 Nov 24 10:24 shared
[2025-11-24 17:35:21] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 10:24 input.tar.gz
[2025-11-24 17:35:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:24 start_atlas.sh
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas         0 Nov 24 10:24 boinc_lockfile
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 10:24 pandaJob.out
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas        57 Nov 24 10:24 setup.sh.local
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas    987541 Nov 24 10:24 agis_schedconf.cvmfs.json
[2025-11-24 17:35:21] drwx------ 5 boincer umatlas      4096 Nov 24 10:24 pilot3
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas       532 Nov 24 17:25 boinc_task_state.xml
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 17:28 init_data.xml
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas 920104320 Nov 24 17:33 HITS.47556137._008138.pool.root.1
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas      1065 Nov 24 17:34 memory_monitor_summary.json
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas   1516227 Nov 24 17:34 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas   2166743 Nov 24 17:34 log.47556137._008138.job.log.tgz.1
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas      8664 Nov 24 17:34 heartbeat.json
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas        95 Nov 24 17:35 pilot_heartbeat.json
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:35 wrapper_checkpoint.txt
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:35 boinc_mmap_file
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas      4745 Nov 24 17:35 pilotlog.txt
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas   3614430 Nov 24 17:35 log.47556137._008138.job.log.1
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas       353 Nov 24 17:35 output.list
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:35 runtime_log
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas   5795840 Nov 24 17:35 result.tar.gz
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 17:35 runtime_log.err
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas       670 Nov 24 17:35 JKrMDm94Sh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmo3KKDmZr3dPo.diag
[2025-11-24 17:35:21] -rw-r--r-- 1 boincer umatlas     21328 Nov 24 17:35 stderr.txt
[2025-11-24 17:35:21] HITS file was successfully produced:
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas 920104320 Nov 24 17:33 shared/HITS.pool.root.1
[2025-11-24 17:35:21]  *** Contents of shared directory: ***
[2025-11-24 17:35:21] total 1305068
[2025-11-24 17:35:21] -rw-r--r-- 2 boincer umatlas 409873583 Nov 24 10:24 ATLAS.root_0
[2025-11-24 17:35:21] -rw-r--r-- 2 boincer umatlas    590101 Nov 24 10:24 input.tar.gz
[2025-11-24 17:35:21] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 10:24 start_atlas.sh
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas 920104320 Nov 24 17:33 HITS.pool.root.1
[2025-11-24 17:35:21] -rw------- 1 boincer umatlas   5795840 Nov 24 17:35 result.tar.gz
17:35:23 (1138): run_atlas exited; CPU time 289987.752847
17:35:23 (1138): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN