Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:47:34 (3823777): wrapper (7.7.26015): starting
05:47:34 (3823777): wrapper: running run_atlas (--nthreads 2)
[2025-11-27 05:47:34] Arguments: --nthreads 2
[2025-11-27 05:47:34] Threads: 2
[2025-11-27 05:47:34] Checking for CVMFS
[2025-11-27 05:47:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:47:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:47:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:47:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:47:34] 2.9.2.0 2377071 12371 65172 153347 0 81 18872502 36864000 0 130560 0 3974153 99.934 608935 3056 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 05:47:34] CVMFS is ok
[2025-11-27 05:47:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:47:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:47:34] Further information can be found at the LHC@home message board.
[2025-11-27 05:47:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:47:34] Checking for apptainer binary...
[2025-11-27 05:47:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:47:35] Running /usr/bin/apptainer --version
[2025-11-27 05:47:35] apptainer version 1.4.1-1.1
[2025-11-27 05:47:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:47:35] thA334a
[2025-11-27 05:47:35] apptainer works
[2025-11-27 05:47:35] Set ATHENA_PROC_NUMBER=2
[2025-11-27 05:47:35] Set ATHENA_CORE_NUMBER=2
[2025-11-27 05:47:35] Starting ATLAS job with PandaID=6895355683
[2025-11-27 05:47:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:12:10]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:12:10] ANSI_COLOR="0;31"
[2025-11-27 18:12:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:12:10] HOME_URL="https://www.centos.org/"
[2025-11-27 18:12:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:12:10] 
[2025-11-27 18:12:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:12:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:12:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:12:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:12:10] 
[2025-11-27 18:12:10] 2025-11-27 17:11:39,019 | INFO     | ***************************************
[2025-11-27 18:12:10] 2025-11-27 17:11:39,522 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 18:12:10] 2025-11-27 17:11:39,552 | INFO     | sufficient remaining disk space (502754443264 B)
[2025-11-27 18:12:10] 2025-11-27 17:11:39,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:12:10] 2025-11-27 17:11:39,553 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:12:10] 2025-11-27 17:11:39,553 | INFO     | update_server=False
[2025-11-27 18:12:10] 2025-11-27 17:11:39,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:12:10] 2025-11-27 17:11:39,554 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:12:10] 2025-11-27 17:11:39,554 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:12:10] 2025-11-27 17:11:39,554 | INFO     | aborting loop
[2025-11-27 18:12:10] 2025-11-27 17:11:39,555 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:12:10] 2025-11-27 17:11:39,958 | INFO     | all payload control threads have been joined
[2025-11-27 18:12:10] 2025-11-27 17:11:40,159 | INFO     | all data control threads have been joined
[2025-11-27 18:12:10] 2025-11-27 17:11:40,261 | INFO     | all job control threads have been joined
[2025-11-27 18:12:10] 2025-11-27 17:11:40,559 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:40,560 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:40,561 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:40,677 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:40,964 | INFO     | [payload] control thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,119 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,156 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,163 | INFO     | [job] validate thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,164 | INFO     | [data] control thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:12:10] 2025-11-27 17:11:41,201 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,267 | INFO     | [job] control thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,560 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,677 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:41,730 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:45,191 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:12:10] 2025-11-27 17:11:49,781 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:12:10] 2025-11-27 17:11:51,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140322957752128)>', '<ExcThread(monitor, started 140322461959936)>']
[2025-11-27 18:12:10] 2025-11-27 17:11:56,145 | INFO     | all workflow threads have been joined
[2025-11-27 18:12:10] 2025-11-27 17:11:56,146 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:12:10] 2025-11-27 17:11:56,146 | INFO     | traces error code: 0
[2025-11-27 18:12:10] 2025-11-27 17:11:56,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:12:10] 2025-11-27 17:12:10,251 | INFO     | PID=3827488 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 18:12:10] 2025-11-27 17:12:10,251 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:12:10] 2025-11-27 17:12:10,251 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:12:10] 2025-11-27 17:12:10,251 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:12:10] 2025-11-27 17:12:10,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:12:10] 2025-11-27 17:12:10,251 | INFO     | [monitor] control thread has ended
[2025-11-27 18:12:10] 2025-11-27 17:12:10,288 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:12:10] 2025-11-27 17:12:10,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:12:10] 2025-11-27 17:12:10,294 [wrapper] pilotpid: 3827488
[2025-11-27 18:12:10] 2025-11-27 17:12:10,296 [wrapper] Pilot exit status: 0
[2025-11-27 18:12:10] 2025-11-27 17:12:10,303 [wrapper] pandaids: 6895355683
[2025-11-27 18:12:10] 2025-11-27 17:12:10,315 [wrapper] cleanup supervisor_pilot 3906500 3827489
[2025-11-27 18:12:10] 2025-11-27 17:12:10,317 [wrapper] Test setup, not cleaning
[2025-11-27 18:12:10] 2025-11-27 17:12:10,319 [wrapper] apfmon messages muted
[2025-11-27 18:12:10] 2025-11-27 17:12:10,321 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:12:10] 2025-11-27 17:12:10,323 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:12:10]  *** Error codes and diagnostics ***
[2025-11-27 18:12:10]     "exeErrorCode": 0,
[2025-11-27 18:12:10]     "exeErrorDiag": "",
[2025-11-27 18:12:10]     "pilotErrorCode": 0,
[2025-11-27 18:12:10]     "pilotErrorDiag": "",
[2025-11-27 18:12:10]  *** Listing of results directory ***
[2025-11-27 18:12:10] total 1327356
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc    576529 Nov 23 09:03 pilot3.tar.gz
[2025-11-27 18:12:10] -rwx------ 1 boinc boinc     36292 Nov 23 09:17 runpilot2-wrapper.sh
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc      5112 Nov 23 09:17 queuedata.json
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc       100 Nov 27 05:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:12:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 05:47 run_atlas
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc       105 Nov 27 05:47 job.xml
[2025-11-27 18:12:10] -rw-r--r-- 2 boinc boinc 410240486 Nov 27 05:47 EVNT.47483658._000669.pool.root.1
[2025-11-27 18:12:10] -rw-r--r-- 2 boinc boinc    590096 Nov 27 05:47 input.tar.gz
[2025-11-27 18:12:10] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:47 start_atlas.sh
[2025-11-27 18:12:10] drwxrwx--x 2 boinc boinc      4096 Nov 27 05:47 shared
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:47 boinc_setup_complete
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc      6208 Nov 27 05:47 init_data.xml
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:47 boinc_lockfile
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc      2785 Nov 27 05:47 pandaJob.out
[2025-11-27 18:12:10] -rw------- 1 boinc boinc    991570 Nov 27 05:47 agis_schedconf.cvmfs.json
[2025-11-27 18:12:10] drwx------ 5 boinc boinc      4096 Nov 27 05:47 pilot3
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc       531 Nov 27 18:08 boinc_task_state.xml
[2025-11-27 18:12:10] -rw------- 1 boinc boinc 930088350 Nov 27 18:11 HITS.47556137._006646.pool.root.1
[2025-11-27 18:12:10] -rw------- 1 boinc boinc      1023 Nov 27 18:11 memory_monitor_summary.json
[2025-11-27 18:12:10] -rw------- 1 boinc boinc   1516240 Nov 27 18:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:12:10] -rw------- 1 boinc boinc   1230028 Nov 27 18:11 log.47556137._006646.job.log.tgz.1
[2025-11-27 18:12:10] -rw------- 1 boinc boinc      8560 Nov 27 18:11 heartbeat.json
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc      8192 Nov 27 18:11 boinc_mmap_file
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc        28 Nov 27 18:11 wrapper_checkpoint.txt
[2025-11-27 18:12:10] -rw------- 1 boinc boinc       747 Nov 27 18:12 pilotlog.txt
[2025-11-27 18:12:10] -rw------- 1 boinc boinc        95 Nov 27 18:12 pilot_heartbeat.json
[2025-11-27 18:12:10] -rw------- 1 boinc boinc   6261203 Nov 27 18:12 log.47556137._006646.job.log.1
[2025-11-27 18:12:10] -rw------- 1 boinc boinc       353 Nov 27 18:12 output.list
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc       620 Nov 27 18:12 runtime_log
[2025-11-27 18:12:10] -rw------- 1 boinc boinc   7505920 Nov 27 18:12 result.tar.gz
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc      8903 Nov 27 18:12 runtime_log.err
[2025-11-27 18:12:10] -rw------- 1 boinc boinc       666 Nov 27 18:12 ml7MDm6SKh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNkKKDmT9wrqm.diag
[2025-11-27 18:12:10] -rw-r--r-- 1 boinc boinc      8453 Nov 27 18:12 stderr.txt
[2025-11-27 18:12:10] HITS file was successfully produced:
[2025-11-27 18:12:10] -rw------- 1 boinc boinc 930088350 Nov 27 18:11 shared/HITS.pool.root.1
[2025-11-27 18:12:10]  *** Contents of shared directory: ***
[2025-11-27 18:12:10] total 1316856
[2025-11-27 18:12:10] -rw-r--r-- 2 boinc boinc 410240486 Nov 27 05:47 ATLAS.root_0
[2025-11-27 18:12:10] -rw-r--r-- 2 boinc boinc    590096 Nov 27 05:47 input.tar.gz
[2025-11-27 18:12:10] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:47 start_atlas.sh
[2025-11-27 18:12:10] -rw------- 1 boinc boinc 930088350 Nov 27 18:11 HITS.pool.root.1
[2025-11-27 18:12:10] -rw------- 1 boinc boinc   7505920 Nov 27 18:12 result.tar.gz
18:12:11 (3823777): run_atlas exited; CPU time 88540.623039
18:12:11 (3823777): called boinc_finish(0)

</stderr_txt>
]]>

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