Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:22:49 (30498): wrapper (7.7.26015): starting
09:22:49 (30498): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 09:22:49] Arguments: --nthreads 8
[2025-11-24 09:22:49] Threads: 8
[2025-11-24 09:22:49] Checking for CVMFS
[2025-11-24 09:22:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:22:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:22:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:22:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:22:49] 2.11.2.0 14221 114902 135960 153248 2 81 9750896 18432001 1885 130560 0 84470743 99.974 4791352 30591 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 09:22:49] CVMFS is ok
[2025-11-24 09:22:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:22:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:22:49] Further information can be found at the LHC@home message board.
[2025-11-24 09:22:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:22:49] Checking for apptainer binary...
[2025-11-24 09:22:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:22:49] Running /usr/bin/apptainer --version
[2025-11-24 09:22:49] apptainer version 1.3.2-1.el7
[2025-11-24 09:22:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:22:50] c-206-9.aglt2.org
[2025-11-24 09:22:50] apptainer works
[2025-11-24 09:22:50] Set ATHENA_PROC_NUMBER=8
[2025-11-24 09:22:50] Set ATHENA_CORE_NUMBER=8
[2025-11-24 09:22:50] Starting ATLAS job with PandaID=6895366220
[2025-11-24 09:22:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:41:01]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:41:02] 2025-11-25 09:39:56,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:41:02] 2025-11-25 09:39:57,764 | INFO     | time since job start (69416s) is within the limit (172800.0s)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,110 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 04:41:02] 2025-11-25 09:39:58,114 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.125
[2025-11-25 04:41:02] 2025-11-25 09:39:58,118 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895366220/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,119 | INFO     | extracted standard info from prmon json
[2025-11-25 04:41:02] 2025-11-25 09:39:58,119 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:41:02] 2025-11-25 09:39:58,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:41:02] 2025-11-25 09:39:58,149 | INFO     | fitting pss+swap vs Time
[2025-11-25 04:41:02] 2025-11-25 09:39:58,151 | INFO     | sum of square deviations: 456989777728.7816
[2025-11-25 04:41:02] 2025-11-25 09:39:58,193 | INFO     | sum of deviations: 2177728586617.887
[2025-11-25 04:41:02] 2025-11-25 09:39:58,193 | INFO     | mean x: 1764028886.1546574
[2025-11-25 04:41:02] 2025-11-25 09:39:58,193 | INFO     | mean y: 2874324.040421793
[2025-11-25 04:41:02] 2025-11-25 09:39:58,193 | INFO     | intersect: -8403388398.270711
[2025-11-25 04:41:02] 2025-11-25 09:39:58,195 | INFO     | chi2: 5.5272251733842275
[2025-11-25 04:41:02] 2025-11-25 09:39:58,196 | INFO     | sum of square deviations: 450992859949.128
[2025-11-25 04:41:02] 2025-11-25 09:39:58,238 | INFO     | sum of deviations: 2539150052858.234
[2025-11-25 04:41:02] 2025-11-25 09:39:58,239 | INFO     | mean x: 1764028733.6575463
[2025-11-25 04:41:02] 2025-11-25 09:39:58,239 | INFO     | mean y: 2883510.925860547
[2025-11-25 04:41:02] 2025-11-25 09:39:58,239 | INFO     | intersect: -9928833928.71442
[2025-11-25 04:41:02] 2025-11-25 09:39:58,241 | INFO     | chi2: 2.589813426813892
[2025-11-25 04:41:02] 2025-11-25 09:39:58,241 | INFO     | current chi2=2.589813426813892 (change=53.144419748179125 %)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,242 | INFO     | sum of square deviations: 445048571963.2778
[2025-11-25 04:41:02] 2025-11-25 09:39:58,284 | INFO     | sum of deviations: 2603404664313.819
[2025-11-25 04:41:02] 2025-11-25 09:39:58,284 | INFO     | mean x: 1764028581.1595745
[2025-11-25 04:41:02] 2025-11-25 09:39:58,285 | INFO     | mean y: 2885154.789893617
[2025-11-25 04:41:02] 2025-11-25 09:39:58,285 | INFO     | intersect: -10316168821.531284
[2025-11-25 04:41:02] 2025-11-25 09:39:58,286 | INFO     | chi2: 2.3266047892628197
[2025-11-25 04:41:02] 2025-11-25 09:39:58,287 | INFO     | current chi2=2.3266047892628197 (change=10.163227776407194 %)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,287 | INFO     | right removable region: 1127
[2025-11-25 04:41:02] 2025-11-25 09:39:58,288 | INFO     | sum of square deviations: 450992405499.12775
[2025-11-25 04:41:02] 2025-11-25 09:39:58,332 | INFO     | sum of deviations: 1881836158134.6106
[2025-11-25 04:41:02] 2025-11-25 09:39:58,332 | INFO     | mean x: 1764029038.6575463
[2025-11-25 04:41:02] 2025-11-25 09:39:58,332 | INFO     | mean y: 2881839.4783759927
[2025-11-25 04:41:02] 2025-11-25 09:39:58,332 | INFO     | intersect: -7357804479.111145
[2025-11-25 04:41:02] 2025-11-25 09:39:58,334 | INFO     | chi2: 3.4904580131493326
[2025-11-25 04:41:02] 2025-11-25 09:39:58,334 | INFO     | current chi2=3.4904580131493326 (change=36.849722896087776 %)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,336 | INFO     | sum of square deviations: 445047801167.2778
[2025-11-25 04:41:02] 2025-11-25 09:39:58,377 | INFO     | sum of deviations: 1806860935061.5754
[2025-11-25 04:41:02] 2025-11-25 09:39:58,377 | INFO     | mean x: 1764029191.1595745
[2025-11-25 04:41:02] 2025-11-25 09:39:58,377 | INFO     | mean y: 2883762.530141844
[2025-11-25 04:41:02] 2025-11-25 09:39:58,377 | INFO     | intersect: -7158943406.269843
[2025-11-25 04:41:02] 2025-11-25 09:39:58,379 | INFO     | chi2: 3.4391226047291514
[2025-11-25 04:41:02] 2025-11-25 09:39:58,379 | INFO     | current chi2=3.4391226047291514 (change=1.4707355947783707 %)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,379 | INFO     | left removable region: 20
[2025-11-25 04:41:02] 2025-11-25 09:39:58,381 | INFO     | sum of square deviations: 420651257540.65234
[2025-11-25 04:41:02] 2025-11-25 09:39:58,420 | INFO     | sum of deviations: 2124926355756.46
[2025-11-25 04:41:02] 2025-11-25 09:39:58,420 | INFO     | mean x: 1764029160.67028
[2025-11-25 04:41:02] 2025-11-25 09:39:58,421 | INFO     | mean y: 2897386.719060524
[2025-11-25 04:41:02] 2025-11-25 09:39:58,421 | INFO     | intersect: -8908123295.22665
[2025-11-25 04:41:02] 2025-11-25 09:39:58,422 | INFO     | chi2: 0.19896406848613044
[2025-11-25 04:41:02] 2025-11-25 09:39:58,423 | INFO     | current memory leak: 5.05 B/s (using 1107 data points, chi2=0.20)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,424 | INFO     | could have reported an average CPU frequency of 2622 MHz (41 samples)
[2025-11-25 04:41:02] 2025-11-25 09:39:58,424 | INFO     | ..............................
[2025-11-25 04:41:02] 2025-11-25 09:39:58,424 | INFO     | . Timing measurements:
[2025-11-25 04:41:02] 2025-11-25 09:39:58,424 | INFO     | . get job = 0 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,425 | INFO     | . initial setup = 2 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,425 | INFO     | . payload setup = 5 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,425 | INFO     | . stage-in = 0 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,425 | INFO     | . payload execution = 69381 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,425 | INFO     | . stage-out = 4 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,425 | INFO     | . log creation = 0 s
[2025-11-25 04:41:02] 2025-11-25 09:39:58,426 | INFO     | ..............................
[2025-11-25 04:41:02] 2025-11-25 09:39:59,050 | INFO     | 
[2025-11-25 04:41:02] 2025-11-25 09:39:59,050 | INFO     | job summary report
[2025-11-25 04:41:02] 2025-11-25 09:39:59,050 | INFO     | --------------------------------------------------
[2025-11-25 04:41:02] 2025-11-25 09:39:59,050 | INFO     | PanDA job id: 6895366220
[2025-11-25 04:41:02] 2025-11-25 09:39:59,050 | INFO     | task id: 47556149
[2025-11-25 04:41:02] 2025-11-25 09:39:59,051 | INFO     | errors: (none)
[2025-11-25 04:41:02] 2025-11-25 09:39:59,051 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:41:02] 2025-11-25 09:39:59,051 | INFO     | pilot state: finished 
[2025-11-25 04:41:02] 2025-11-25 09:39:59,051 | INFO     | transexitcode: 0
[2025-11-25 04:41:02] 2025-11-25 09:39:59,051 | INFO     | exeerrorcode: 0
[2025-11-25 04:41:02] 2025-11-25 09:39:59,051 | INFO     | exeerrordiag: 
[2025-11-25 04:41:02] 2025-11-25 09:39:59,052 | INFO     | exitcode: 0
[2025-11-25 04:41:02] 2025-11-25 09:39:59,052 | INFO     | exitmsg: OK
[2025-11-25 04:41:02] 2025-11-25 09:39:59,052 | INFO     | cpuconsumptiontime: 536666 s
[2025-11-25 04:41:02] 2025-11-25 09:39:59,052 | INFO     | nevents: 1000
[2025-11-25 04:41:02] 2025-11-25 09:39:59,052 | INFO     | neventsw: 0
[2025-11-25 04:41:02] 2025-11-25 09:39:59,052 | INFO     | pid: 9663
[2025-11-25 04:41:02] 2025-11-25 09:39:59,053 | INFO     | pgrp: 9663
[2025-11-25 04:41:02] 2025-11-25 09:39:59,053 | INFO     | corecount: 8
[2025-11-25 04:41:02] 2025-11-25 09:39:59,053 | INFO     | event service: False
[2025-11-25 04:41:02] 2025-11-25 09:39:59,053 | INFO     | sizes: {0: 2284259, 1: 2284259, 4: 2284549, 11: 2284577, 69390: 2340805, 69395: 2350016, 69402: 2350302}
[2025-11-25 04:41:02] 2025-11-25 09:39:59,053 | INFO     | --------------------------------------------------
[2025-11-25 04:41:02] 2025-11-25 09:39:59,053 | INFO     | 
[2025-11-25 04:41:02] 2025-11-25 09:39:59,054 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 04:41:02] 2025-11-25 09:39:59,074 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:41:02] 2025-11-25 09:39:59,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,078 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:41:02] 2025-11-25 09:39:59,078 | INFO     | job 6895366220 has completed (purged errors)
[2025-11-25 04:41:02] 2025-11-25 09:39:59,078 | INFO     | overall cleanup function is called
[2025-11-25 04:41:02] 2025-11-25 09:40:00,093 | INFO     | --- collectZombieJob: --- 10, [9663]
[2025-11-25 04:41:02] 2025-11-25 09:40:00,094 | INFO     | zombie collector waiting for pid 9663
[2025-11-25 04:41:02] 2025-11-25 09:40:00,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:41:02] 2025-11-25 09:40:00,094 | INFO     | collected zombie processes
[2025-11-25 04:41:02] 2025-11-25 09:40:00,094 | INFO     | will attempt to kill all subprocesses of pid=9663
[2025-11-25 04:41:02] 2025-11-25 09:40:00,267 | INFO     | process IDs to be killed: [9663] (in reverse order)
[2025-11-25 04:41:02] 2025-11-25 09:40:00,333 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:41:02] 2025-11-25 09:40:00,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:41:02] 2025-11-25 09:40:00,339 | INFO     | did not find any defunct processes belonging to 9663
[2025-11-25 04:41:02] 2025-11-25 09:40:00,343 | INFO     | did not find any defunct processes belonging to 9663
[2025-11-25 04:41:02] 2025-11-25 09:40:00,345 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:41:02] 2025-11-25 09:40:00,345 | INFO     | ready for new job
[2025-11-25 04:41:02] 2025-11-25 09:40:00,345 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:41:02] 2025-11-25 09:40:00,350 | INFO     | ***************************************
[2025-11-25 04:41:02] 2025-11-25 09:40:00,350 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:41:02] 2025-11-25 09:40:00,351 | INFO     | ***************************************
[2025-11-25 04:41:02] 2025-11-25 09:40:00,351 | INFO     | 
[2025-11-25 04:41:02] 2025-11-25 09:40:00,352 | INFO     | architecture information:
[2025-11-25 04:41:02] 2025-11-25 09:40:00,353 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:41:02] 2025-11-25 09:40:00,367 | INFO     | cat /etc/os-release:
[2025-11-25 04:41:02] NAME="CentOS Linux"
[2025-11-25 04:41:02] VERSION="7 (Core)"
[2025-11-25 04:41:02] ID="centos"
[2025-11-25 04:41:02] ID_LIKE="rhel fedora"
[2025-11-25 04:41:02] VERSION_ID="7"
[2025-11-25 04:41:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:41:02] ANSI_COLOR="0;31"
[2025-11-25 04:41:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:41:02] HOME_URL="https://www.centos.org/"
[2025-11-25 04:41:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:41:02] 
[2025-11-25 04:41:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:41:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:41:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:41:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:41:02] 
[2025-11-25 04:41:02] 2025-11-25 09:40:00,367 | INFO     | ***************************************
[2025-11-25 04:41:02] 2025-11-25 09:40:00,870 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 04:41:02] 2025-11-25 09:40:00,885 | INFO     | sufficient remaining disk space (24948768768 B)
[2025-11-25 04:41:02] 2025-11-25 09:40:00,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:41:02] 2025-11-25 09:40:00,886 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:41:02] 2025-11-25 09:40:00,886 | INFO     | update_server=False
[2025-11-25 04:41:02] 2025-11-25 09:40:00,886 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:41:02] 2025-11-25 09:40:00,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:41:02] 2025-11-25 09:40:00,887 | INFO     | aborting loop
[2025-11-25 04:41:02] 2025-11-25 09:40:00,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:41:02] 2025-11-25 09:40:00,908 | INFO     | all data control threads have been joined
[2025-11-25 04:41:02] 2025-11-25 09:40:01,310 | INFO     | all job control threads have been joined
[2025-11-25 04:41:02] 2025-11-25 09:40:01,893 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:01,893 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:01,913 | INFO     | [data] control thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,079 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,201 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,312 | INFO     | [job] control thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,322 | INFO     | all payload control threads have been joined
[2025-11-25 04:41:02] 2025-11-25 09:40:02,494 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,549 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,587 | INFO     | [job] validate thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,613 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,659 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:02,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:41:02] 2025-11-25 09:40:02,893 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:03,171 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:03,328 | INFO     | [payload] control thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:03,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:41:02] 2025-11-25 09:40:04,595 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:06,795 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:41:02] 2025-11-25 09:40:29,805 | INFO     | 69420s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-25 04:41:02] 2025-11-25 09:40:31,014 | INFO     | PID=2754 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 04:41:02] 2025-11-25 09:40:31,015 | INFO     | .. there are 3 such processes running
[2025-11-25 04:41:02] 2025-11-25 09:40:31,015 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:41:02] 2025-11-25 09:40:31,015 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:41:02] 2025-11-25 09:40:31,015 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:41:02] 2025-11-25 09:40:56,521 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:41:02] 2025-11-25 09:40:56,608 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139781656594240)>', '<ExcThread(monitor, started 139781203793664)>']
[2025-11-25 04:41:02] 2025-11-25 09:40:57,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:41:02] 2025-11-25 09:40:57,143 | INFO     | [monitor] control thread has ended
[2025-11-25 04:41:02] 2025-11-25 09:41:01,633 | INFO     | all workflow threads have been joined
[2025-11-25 04:41:02] 2025-11-25 09:41:01,633 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:41:02] 2025-11-25 09:41:01,634 | INFO     | traces error code: 0
[2025-11-25 04:41:02] 2025-11-25 09:41:01,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:41:02] 2025-11-25 09:41:01,766 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:41:02] 2025-11-25 09:41:01,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:41:02] 2025-11-25 09:41:01,772 [wrapper] pilotpid: 2754
[2025-11-25 04:41:02] 2025-11-25 09:41:01,775 [wrapper] Pilot exit status: 0
[2025-11-25 04:41:02] 2025-11-25 09:41:01,784 [wrapper] pandaids: 6895366220
[2025-11-25 04:41:02] 2025-11-25 09:41:01,827 [wrapper] cleanup supervisor_pilot  7720 2755
[2025-11-25 04:41:02] 2025-11-25 09:41:01,830 [wrapper] Test setup, not cleaning
[2025-11-25 04:41:02] 2025-11-25 09:41:01,834 [wrapper] apfmon messages muted
[2025-11-25 04:41:02] 2025-11-25 09:41:01,841 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:41:02] 2025-11-25 09:41:01,846 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:41:02]  *** Error codes and diagnostics ***
[2025-11-25 04:41:02]     "exeErrorCode": 0,
[2025-11-25 04:41:02]     "exeErrorDiag": "",
[2025-11-25 04:41:02]     "pilotErrorCode": 0,
[2025-11-25 04:41:02]     "pilotErrorDiag": "",
[2025-11-25 04:41:02]  *** Listing of results directory ***
[2025-11-25 04:41:02] total 1317264
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 13:24 pilot3.tar.gz
[2025-11-25 04:41:02] -rwx------ 1 boincer umatlas     36292 Nov 23 13:26 runpilot2-wrapper.sh
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 13:26 queuedata.json
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas       100 Nov 24 09:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:41:02] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 09:22 run_atlas
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas       105 Nov 24 09:22 job.xml
[2025-11-25 04:41:02] -rw-r--r-- 2 boincer umatlas 407918956 Nov 24 09:22 EVNT.47483658._001182.pool.root.1
[2025-11-25 04:41:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:22 start_atlas.sh
[2025-11-25 04:41:02] drwxrwx--x 2 boincer umatlas      4096 Nov 24 09:22 shared
[2025-11-25 04:41:02] -rw-r--r-- 2 boincer umatlas    590108 Nov 24 09:22 input.tar.gz
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas         0 Nov 24 09:22 boinc_lockfile
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 09:22 pandaJob.out
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas        57 Nov 24 09:22 setup.sh.local
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas    988283 Nov 24 09:22 agis_schedconf.cvmfs.json
[2025-11-25 04:41:02] drwx------ 5 boincer umatlas      4096 Nov 24 09:23 pilot3
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas       533 Nov 25 04:30 boinc_task_state.xml
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 04:37 init_data.xml
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas 913225683 Nov 25 04:39 HITS.47556149._001686.pool.root.1
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas      1068 Nov 25 04:39 memory_monitor_summary.json
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas   1516240 Nov 25 04:39 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas        95 Nov 25 04:39 pilot_heartbeat.json
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas   2317350 Nov 25 04:39 log.47556149._001686.job.log.tgz.1
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas      8674 Nov 25 04:39 heartbeat.json
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 04:40 boinc_mmap_file
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas        29 Nov 25 04:40 wrapper_checkpoint.txt
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas      4936 Nov 25 04:41 pilotlog.txt
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas   9589043 Nov 25 04:41 log.47556149._001686.job.log.1
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas       353 Nov 25 04:41 output.list
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas       620 Nov 25 04:41 runtime_log
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas  11929600 Nov 25 04:41 result.tar.gz
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 04:41 runtime_log.err
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas       667 Nov 25 04:41 9kbLDmjyTh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9fIKDmeGN9um.diag
[2025-11-25 04:41:02] -rw-r--r-- 1 boincer umatlas     21289 Nov 25 04:41 stderr.txt
[2025-11-25 04:41:02] HITS file was successfully produced:
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas 913225683 Nov 25 04:39 shared/HITS.pool.root.1
[2025-11-25 04:41:02]  *** Contents of shared directory: ***
[2025-11-25 04:41:02] total 1302436
[2025-11-25 04:41:02] -rw-r--r-- 2 boincer umatlas 407918956 Nov 24 09:22 ATLAS.root_0
[2025-11-25 04:41:02] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:22 start_atlas.sh
[2025-11-25 04:41:02] -rw-r--r-- 2 boincer umatlas    590108 Nov 24 09:22 input.tar.gz
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas 913225683 Nov 25 04:39 HITS.pool.root.1
[2025-11-25 04:41:02] -rw------- 1 boincer umatlas  11929600 Nov 25 04:41 result.tar.gz
04:41:03 (30498): run_atlas exited; CPU time 535565.313251
04:41:03 (30498): called boinc_finish(0)

</stderr_txt>
]]>

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