Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:57:01 (11699): wrapper (7.7.26015): starting
20:57:01 (11699): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:57:01] Arguments: --nthreads 8
[2025-11-26 20:57:01] Threads: 8
[2025-11-26 20:57:01] Checking for CVMFS
[2025-11-26 20:57:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:57:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:57:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:57:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:57:04] 2.11.2.0 20118 285669 140044 153333 2 72 21378773 25165825 1288 130560 10 126538850 99.865 78258463 2457 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 20:57:04] CVMFS is ok
[2025-11-26 20:57:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:57:04] Checking for apptainer binary...
[2025-11-26 20:57:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:57:04] Running /usr/bin/apptainer --version
[2025-11-26 20:57:04] apptainer version 1.3.2-1.el7
[2025-11-26 20:57:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:57:20] cg-vwn344.simple-grid.lan
[2025-11-26 20:57:20] apptainer works
[2025-11-26 20:57:20] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:57:20] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:57:20] Starting ATLAS job with PandaID=6895365749
[2025-11-26 20:57:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:33:52]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:33:52] 2025-11-27 19:33:03,413 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:33:52] 2025-11-27 19:33:03,535 | INFO     | time since job start (84729s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:05,541 | INFO     | time since job start (84731s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:05,919 | INFO     | monitor loop #5709: job 0:6895365749 is in state 'finished'
[2025-11-27 20:33:52] 2025-11-27 19:33:05,919 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:33:52] 2025-11-27 19:33:07,553 | INFO     | time since job start (84733s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:08,423 | INFO     | monitor loop #5710: job 0:6895365749 is in state 'finished'
[2025-11-27 20:33:52] 2025-11-27 19:33:08,423 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:33:52] 2025-11-27 19:33:09,560 | INFO     | time since job start (84735s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:10,935 | INFO     | monitor loop #5711: job 0:6895365749 is in state 'finished'
[2025-11-27 20:33:52] 2025-11-27 19:33:10,935 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:33:52] 2025-11-27 19:33:11,568 | INFO     | time since job start (84737s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:13,440 | INFO     | monitor loop #5712: job 0:6895365749 is in state 'finished'
[2025-11-27 20:33:52] 2025-11-27 19:33:13,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:33:52] 2025-11-27 19:33:13,574 | INFO     | time since job start (84739s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:14,978 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:33:52] 2025-11-27 19:33:14,979 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 20:33:52] 2025-11-27 19:33:14,981 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6895365749/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:33:52] 2025-11-27 19:33:14,982 | INFO     | extracted standard info from prmon json
[2025-11-27 20:33:52] 2025-11-27 19:33:14,982 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:33:52] 2025-11-27 19:33:14,982 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:33:52] 2025-11-27 19:33:15,006 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:33:52] 2025-11-27 19:33:15,008 | INFO     | sum of square deviations: 814919395027.8429
[2025-11-27 20:33:52] 2025-11-27 19:33:15,070 | INFO     | sum of deviations: 2660682244184.188
[2025-11-27 20:33:52] 2025-11-27 19:33:15,070 | INFO     | mean x: 1764229827.547826
[2025-11-27 20:33:52] 2025-11-27 19:33:15,070 | INFO     | mean y: 2835121.110869565
[2025-11-27 20:33:52] 2025-11-27 19:33:15,070 | INFO     | intersect: -5757311226.438331
[2025-11-27 20:33:52] 2025-11-27 19:33:15,072 | INFO     | chi2: 26.75956639046489
[2025-11-27 20:33:52] 2025-11-27 19:33:15,074 | INFO     | sum of square deviations: 806094051967.3336
[2025-11-27 20:33:52] 2025-11-27 19:33:15,128 | INFO     | sum of deviations: 3113467050560.917
[2025-11-27 20:33:52] 2025-11-27 19:33:15,129 | INFO     | mean x: 1764229675.0516365
[2025-11-27 20:33:52] 2025-11-27 19:33:15,129 | INFO     | mean y: 2842943.3956363634
[2025-11-27 20:33:52] 2025-11-27 19:33:15,129 | INFO     | intersect: -6811338292.018886
[2025-11-27 20:33:52] 2025-11-27 19:33:15,130 | INFO     | chi2: 23.530399818581117
[2025-11-27 20:33:52] 2025-11-27 19:33:15,131 | INFO     | current chi2=23.530399818581117 (change=12.067335190582188 %)
[2025-11-27 20:33:52] 2025-11-27 19:33:15,131 | INFO     | right removable region: 1374
[2025-11-27 20:33:52] 2025-11-27 19:33:15,133 | INFO     | sum of square deviations: 806093169907.3336
[2025-11-27 20:33:52] 2025-11-27 19:33:15,195 | INFO     | sum of deviations: 2079543479347.8835
[2025-11-27 20:33:52] 2025-11-27 19:33:15,202 | INFO     | mean x: 1764229980.0516365
[2025-11-27 20:33:52] 2025-11-27 19:33:15,202 | INFO     | mean y: 2845161.762181818
[2025-11-27 20:33:52] 2025-11-27 19:33:15,202 | INFO     | intersect: -4548481022.415984
[2025-11-27 20:33:52] 2025-11-27 19:33:15,204 | INFO     | chi2: 22.01504854028277
[2025-11-27 20:33:52] 2025-11-27 19:33:15,204 | INFO     | current chi2=22.01504854028277 (change=17.73017462597119 %)
[2025-11-27 20:33:52] 2025-11-27 19:33:15,204 | INFO     | left removable region: 10
[2025-11-27 20:33:52] 2025-11-27 19:33:15,206 | INFO     | sum of square deviations: 786901326166.0709
[2025-11-27 20:33:52] 2025-11-27 19:33:15,259 | INFO     | sum of deviations: 2123953201256.348
[2025-11-27 20:33:52] 2025-11-27 19:33:15,260 | INFO     | mean x: 1764229949.5601172
[2025-11-27 20:33:52] 2025-11-27 19:33:15,260 | INFO     | mean y: 2863835.587243402
[2025-11-27 20:33:52] 2025-11-27 19:33:15,260 | INFO     | intersect: -4759031620.069574
[2025-11-27 20:33:52] 2025-11-27 19:33:15,262 | INFO     | chi2: 14.340199650776025
[2025-11-27 20:33:52] 2025-11-27 19:33:15,262 | INFO     | current memory leak: 2.70 B/s (using 1364 data points, chi2=14.34)
[2025-11-27 20:33:52] 2025-11-27 19:33:15,263 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 20:33:52] 2025-11-27 19:33:15,263 | INFO     | ..............................
[2025-11-27 20:33:52] 2025-11-27 19:33:15,263 | INFO     | . Timing measurements:
[2025-11-27 20:33:52] 2025-11-27 19:33:15,263 | INFO     | . get job = 0 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | . initial setup = 18 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | . payload setup = 157 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | . stage-in = 0 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | . payload execution = 84296 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | . stage-out = 5 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | . log creation = 2 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,264 | INFO     | ..............................
[2025-11-27 20:33:52] 2025-11-27 19:33:15,580 | INFO     | time since job start (84741s) is within the limit (172800.0s)
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | 
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | job summary report
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | --------------------------------------------------
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | PanDA job id: 6895365749
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | task id: 47556137
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | errors: (none)
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | pilot state: finished 
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | transexitcode: 0
[2025-11-27 20:33:52] 2025-11-27 19:33:15,850 | INFO     | exeerrorcode: 0
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | exeerrordiag: 
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | exitcode: 0
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | exitmsg: OK
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | cpuconsumptiontime: 316875 s
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | nevents: 1000
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | neventsw: 0
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | pid: 22071
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | pgrp: 22071
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | corecount: 8
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | event service: False
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | sizes: {0: 2284093, 1: 2284292, 12: 2284292, 23: 2284320, 33: 2284348, 44: 2284404, 55: 2284560, 66: 2284588, 76: 2284616, 87: 2284672, 88: 2284962, 98: 2285270, 8
[2025-11-27 20:33:52] 2025-11-27 19:33:15,851 | INFO     | --------------------------------------------------
[2025-11-27 20:33:52] 2025-11-27 19:33:15,852 | INFO     | 
[2025-11-27 20:33:52] 2025-11-27 19:33:15,852 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-27 20:33:52] 2025-11-27 19:33:16,471 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,471 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,472 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | job 6895365749 has completed (purged errors)
[2025-11-27 20:33:52] 2025-11-27 19:33:16,473 | INFO     | overall cleanup function is called
[2025-11-27 20:33:52] 2025-11-27 19:33:17,494 | INFO     | --- collectZombieJob: --- 10, [22071]
[2025-11-27 20:33:52] 2025-11-27 19:33:17,494 | INFO     | zombie collector waiting for pid 22071
[2025-11-27 20:33:52] 2025-11-27 19:33:17,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:33:52] 2025-11-27 19:33:17,494 | INFO     | collected zombie processes
[2025-11-27 20:33:52] 2025-11-27 19:33:17,494 | INFO     | will attempt to kill all subprocesses of pid=22071
[2025-11-27 20:33:52] 2025-11-27 19:33:17,587 | INFO     | process IDs to be killed: [22071] (in reverse order)
[2025-11-27 20:33:52] 2025-11-27 19:33:18,439 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:33:52] 2025-11-27 19:33:18,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:33:52] 2025-11-27 19:33:18,443 | INFO     | did not find any defunct processes belonging to 22071
[2025-11-27 20:33:52] 2025-11-27 19:33:18,445 | INFO     | did not find any defunct processes belonging to 22071
[2025-11-27 20:33:52] 2025-11-27 19:33:18,498 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:33:52] 2025-11-27 19:33:18,498 | INFO     | ready for new job
[2025-11-27 20:33:52] 2025-11-27 19:33:18,498 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:33:52] 2025-11-27 19:33:18,504 | INFO     | ***************************************
[2025-11-27 20:33:52] 2025-11-27 19:33:18,504 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:33:52] 2025-11-27 19:33:18,504 | INFO     | ***************************************
[2025-11-27 20:33:52] 2025-11-27 19:33:18,504 | INFO     | 
[2025-11-27 20:33:52] 2025-11-27 19:33:18,505 | INFO     | pilot is running in a VM
[2025-11-27 20:33:52] 2025-11-27 19:33:18,505 | INFO     | architecture information:
[2025-11-27 20:33:52] 2025-11-27 19:33:18,520 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:33:52] 2025-11-27 19:33:18,834 | INFO     | cat /etc/os-release:
[2025-11-27 20:33:52] NAME="CentOS Linux"
[2025-11-27 20:33:52] VERSION="7 (Core)"
[2025-11-27 20:33:52] ID="centos"
[2025-11-27 20:33:52] ID_LIKE="rhel fedora"
[2025-11-27 20:33:52] VERSION_ID="7"
[2025-11-27 20:33:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:33:52] ANSI_COLOR="0;31"
[2025-11-27 20:33:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:33:52] HOME_URL="https://www.centos.org/"
[2025-11-27 20:33:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:33:52] 
[2025-11-27 20:33:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:33:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:33:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:33:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:33:52] 
[2025-11-27 20:33:52] 2025-11-27 19:33:18,834 | INFO     | ***************************************
[2025-11-27 20:33:52] 2025-11-27 19:33:19,338 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-27 20:33:52] 2025-11-27 19:33:19,559 | INFO     | sufficient remaining disk space (494885928960 B)
[2025-11-27 20:33:52] 2025-11-27 19:33:19,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:33:52] 2025-11-27 19:33:19,560 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:33:52] 2025-11-27 19:33:19,560 | INFO     | update_server=False
[2025-11-27 20:33:52] 2025-11-27 19:33:19,560 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:33:52] 2025-11-27 19:33:19,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:33:52] 2025-11-27 19:33:19,562 | INFO     | aborting loop
[2025-11-27 20:33:52] 2025-11-27 19:33:19,888 | INFO     | all data control threads have been joined
[2025-11-27 20:33:52] 2025-11-27 19:33:19,898 | INFO     | all payload control threads have been joined
[2025-11-27 20:33:52] 2025-11-27 19:33:20,185 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:33:52] 2025-11-27 19:33:20,405 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:33:52] 2025-11-27 19:33:20,566 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:20,568 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:20,590 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:20,894 | INFO     | [data] control thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:20,903 | INFO     | [payload] control thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:20,977 | INFO     | all job control threads have been joined
[2025-11-27 20:33:52] 2025-11-27 19:33:20,978 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,210 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,247 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:33:52] 2025-11-27 19:33:21,350 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,411 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,441 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,908 | INFO     | [job] validate thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,970 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,982 | INFO     | [job] control thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:21,991 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:22,192 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:23,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:33:52] 2025-11-27 19:33:27,060 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:33:52] 2025-11-27 19:33:27,714 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877523543872)>', '<ExcThread(monitor, started 139876808779520)>']
[2025-11-27 20:33:52] 2025-11-27 19:33:32,740 | INFO     | all workflow threads have been joined
[2025-11-27 20:33:52] 2025-11-27 19:33:32,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:33:52] 2025-11-27 19:33:32,740 | INFO     | traces error code: 0
[2025-11-27 20:33:52] 2025-11-27 19:33:32,741 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:33:52] 2025-11-27 19:33:48,737 | INFO     | PID=15474 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 20:33:52] 2025-11-27 19:33:48,737 | INFO     | .. there are 9 such processes running
[2025-11-27 20:33:52] 2025-11-27 19:33:48,737 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:33:52] 2025-11-27 19:33:48,737 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:33:52] 2025-11-27 19:33:48,737 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:33:52] 2025-11-27 19:33:48,737 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:33:52] 2025-11-27 19:33:48,738 | INFO     | [monitor] control thread has ended
[2025-11-27 20:33:52] 2025-11-27 19:33:49,108 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:33:52] 2025-11-27 19:33:49,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:33:52] 2025-11-27 19:33:49,237 [wrapper] pilotpid: 15474
[2025-11-27 20:33:52] 2025-11-27 19:33:49,347 [wrapper] Pilot exit status: 0
[2025-11-27 20:33:52] 2025-11-27 19:33:49,694 [wrapper] pandaids: 6895365749
[2025-11-27 20:33:52] 2025-11-27 19:33:50,255 [wrapper] cleanup supervisor_pilot 27823 15475
[2025-11-27 20:33:52] 2025-11-27 19:33:50,325 [wrapper] Test setup, not cleaning
[2025-11-27 20:33:52] 2025-11-27 19:33:50,420 [wrapper] apfmon messages muted
[2025-11-27 20:33:52] 2025-11-27 19:33:50,514 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:33:52] 2025-11-27 19:33:50,604 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:33:52]  *** Error codes and diagnostics ***
[2025-11-27 20:33:52]     "exeErrorCode": 0,
[2025-11-27 20:33:52]     "exeErrorDiag": "",
[2025-11-27 20:33:52]     "pilotErrorCode": 0,
[2025-11-27 20:33:52]     "pilotErrorDiag": "",
[2025-11-27 20:33:52]  *** Listing of results directory ***
[2025-11-27 20:33:52] total 1339088
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc    576529 Nov 23 18:39 pilot3.tar.gz
[2025-11-27 20:33:52] -rwx------. 1 boinc boinc     36292 Nov 23 18:54 runpilot2-wrapper.sh
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc      5112 Nov 23 18:54 queuedata.json
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc       100 Nov 26 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:33:52] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 20:57 run_atlas
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc       105 Nov 26 20:57 job.xml
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc      6391 Nov 26 20:57 init_data.xml
[2025-11-27 20:33:52] -rw-r--r--. 2 boinc boinc 411253397 Nov 26 20:57 EVNT.47483658._000833.pool.root.1
[2025-11-27 20:33:52] -rw-r--r--. 2 boinc boinc     15847 Nov 26 20:57 start_atlas.sh
[2025-11-27 20:33:52] drwxrwx--x. 2 boinc boinc        68 Nov 26 20:57 shared
[2025-11-27 20:33:52] -rw-r--r--. 2 boinc boinc    590094 Nov 26 20:57 input.tar.gz
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc         0 Nov 26 20:57 boinc_lockfile
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc      2785 Nov 26 20:57 pandaJob.out
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc    991522 Nov 26 21:00 agis_schedconf.cvmfs.json
[2025-11-27 20:33:52] drwx------. 5 boinc boinc      4096 Nov 26 21:00 pilot3
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc       533 Nov 27 20:05 boinc_task_state.xml
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc 928541459 Nov 27 20:30 HITS.47556137._008192.pool.root.1
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc      1027 Nov 27 20:31 memory_monitor_summary.json
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc   1516240 Nov 27 20:31 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc   2459118 Nov 27 20:31 log.47556137._008192.job.log.tgz.1
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc      8642 Nov 27 20:33 heartbeat.json
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc        95 Nov 27 20:33 pilot_heartbeat.json
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc      8192 Nov 27 20:33 boinc_mmap_file
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc        29 Nov 27 20:33 wrapper_checkpoint.txt
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc       820 Nov 27 20:33 pilotlog.txt
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc  11305605 Nov 27 20:33 log.47556137._008192.job.log.1
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc       353 Nov 27 20:33 output.list
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc       620 Nov 27 20:33 runtime_log
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc  13783040 Nov 27 20:33 result.tar.gz
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc       662 Nov 27 20:33 xXJKDmrSTh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm94KKDmhbxETm.diag
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc      8817 Nov 27 20:33 runtime_log.err
[2025-11-27 20:33:52] -rw-r--r--. 1 boinc boinc     21442 Nov 27 20:33 stderr.txt
[2025-11-27 20:33:52] HITS file was successfully produced:
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc 928541459 Nov 27 20:30 shared/HITS.pool.root.1
[2025-11-27 20:33:52]  *** Contents of shared directory: ***
[2025-11-27 20:33:52] total 1322452
[2025-11-27 20:33:52] -rw-r--r--. 2 boinc boinc 411253397 Nov 26 20:57 ATLAS.root_0
[2025-11-27 20:33:52] -rw-r--r--. 2 boinc boinc     15847 Nov 26 20:57 start_atlas.sh
[2025-11-27 20:33:52] -rw-r--r--. 2 boinc boinc    590094 Nov 26 20:57 input.tar.gz
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc 928541459 Nov 27 20:30 HITS.pool.root.1
[2025-11-27 20:33:52] -rw-------. 1 boinc boinc  13783040 Nov 27 20:33 result.tar.gz
20:33:54 (11699): run_atlas exited; CPU time 317479.222092
20:33:54 (11699): called boinc_finish(0)

</stderr_txt>
]]>

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