Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:56:44 (8340): wrapper (7.7.26015): starting
09:56:44 (8340): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 09:56:44] Arguments: --nthreads 8
[2025-11-24 09:56:44] Threads: 8
[2025-11-24 09:56:44] Checking for CVMFS
[2025-11-24 09:56:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:56:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:56:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:56:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:56:45] 2.11.2.0 2830 46133 82912 153248 3 81 14209272 20275200 1 130560 0 8137645 99.705 2912718 27200 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 09:56:45] CVMFS is ok
[2025-11-24 09:56:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:56:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:56:45] Further information can be found at the LHC@home message board.
[2025-11-24 09:56:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:56:45] Checking for apptainer binary...
[2025-11-24 09:56:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:56:45] Running /usr/bin/apptainer --version
[2025-11-24 09:56:45] apptainer version 1.3.2-1.el7
[2025-11-24 09:56:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:56:46] c-204-5.aglt2.org
[2025-11-24 09:56:46] apptainer works
[2025-11-24 09:56:46] Set ATHENA_PROC_NUMBER=8
[2025-11-24 09:56:46] Set ATHENA_CORE_NUMBER=8
[2025-11-24 09:56:46] Starting ATLAS job with PandaID=6895355496
[2025-11-24 09:56:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
14:45:45 (16055): wrapper (7.7.26015): starting
14:45:45 (16055): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 14:45:45] Arguments: --nthreads 8
[2025-11-24 14:45:45] Threads: 8
[2025-11-24 14:45:45] This job has been restarted, cleaning up previous attempt
[2025-11-24 14:45:45] Checking for CVMFS
[2025-11-24 14:45:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 14:45:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 14:45:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 14:45:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 14:45:46] 2.11.2.0 2830 46422 85788 153257 3 57 14586866 20275200 1 130560 0 8268730 99.709 2927149 27232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 14:45:46] CVMFS is ok
[2025-11-24 14:45:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 14:45:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 14:45:46] Further information can be found at the LHC@home message board.
[2025-11-24 14:45:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 14:45:46] Checking for apptainer binary...
[2025-11-24 14:45:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 14:45:46] Running /usr/bin/apptainer --version
[2025-11-24 14:45:46] apptainer version 1.3.2-1.el7
[2025-11-24 14:45:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 14:45:48] c-204-5.aglt2.org
[2025-11-24 14:45:48] apptainer works
[2025-11-24 14:45:48] Set ATHENA_PROC_NUMBER=8
[2025-11-24 14:45:48] Set ATHENA_CORE_NUMBER=8
[2025-11-24 14:45:48] Starting ATLAS job with PandaID=6895355496
[2025-11-24 14:45:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
16:31:47 (22935): wrapper (7.7.26015): starting
16:31:47 (22935): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 16:31:47] Arguments: --nthreads 8
[2025-11-24 16:31:47] Threads: 8
[2025-11-24 16:31:47] This job has been restarted, cleaning up previous attempt
[2025-11-24 16:31:47] Checking for CVMFS
[2025-11-24 16:31:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 16:31:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 16:31:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 16:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 16:31:48] 2.11.2.0 2830 46528 86136 153259 1 56 14723117 20275200 1 130560 0 8357086 99.712 2929861 27237 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 16:31:48] CVMFS is ok
[2025-11-24 16:31:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:31:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:31:48] Further information can be found at the LHC@home message board.
[2025-11-24 16:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:31:48] Checking for apptainer binary...
[2025-11-24 16:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 16:31:48] Running /usr/bin/apptainer --version
[2025-11-24 16:31:48] apptainer version 1.3.2-1.el7
[2025-11-24 16:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:31:49] c-204-5.aglt2.org
[2025-11-24 16:31:49] apptainer works
[2025-11-24 16:31:49] Set ATHENA_PROC_NUMBER=8
[2025-11-24 16:31:49] Set ATHENA_CORE_NUMBER=8
[2025-11-24 16:31:49] Starting ATLAS job with PandaID=6895355496
[2025-11-24 16:31:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 05:10:37]  *** The last 200 lines of the pilot log: ***
[2025-11-25 05:10:37] 2025-11-25 10:10:05,040 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 05:10:37] 2025-11-25 10:10:05,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 05:10:37] 2025-11-25 10:10:05,054 | INFO     | fitting pss+swap vs Time
[2025-11-25 05:10:37] 2025-11-25 10:10:05,055 | INFO     | sum of square deviations: 128216807861.65639
[2025-11-25 05:10:37] 2025-11-25 10:10:05,067 | INFO     | sum of deviations: 744312707675.1843
[2025-11-25 05:10:37] 2025-11-25 10:10:05,067 | INFO     | mean x: 1764042649.5785234
[2025-11-25 05:10:37] 2025-11-25 10:10:05,067 | INFO     | mean y: 3055716.7489932887
[2025-11-25 05:10:37] 2025-11-25 10:10:05,067 | INFO     | intersect: -10237406379.13316
[2025-11-25 05:10:37] 2025-11-25 10:10:05,068 | INFO     | chi2: 5.992121543876015
[2025-11-25 05:10:37] 2025-11-25 10:10:05,069 | INFO     | sum of square deviations: 125652667979.9716
[2025-11-25 05:10:37] 2025-11-25 10:10:05,080 | INFO     | sum of deviations: 991943210293.5077
[2025-11-25 05:10:37] 2025-11-25 10:10:05,080 | INFO     | mean x: 1764042497.0824325
[2025-11-25 05:10:37] 2025-11-25 10:10:05,081 | INFO     | mean y: 3070439.1391891893
[2025-11-25 05:10:37] 2025-11-25 10:10:05,081 | INFO     | intersect: -13922857324.91782
[2025-11-25 05:10:37] 2025-11-25 10:10:05,081 | INFO     | chi2: 3.169043856891669
[2025-11-25 05:10:37] 2025-11-25 10:10:05,082 | INFO     | current chi2=3.169043856891669 (change=47.11315794102256 %)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,082 | INFO     | sum of square deviations: 123122947348.26392
[2025-11-25 05:10:37] 2025-11-25 10:10:05,094 | INFO     | sum of deviations: 1119270403732.0327
[2025-11-25 05:10:37] 2025-11-25 10:10:05,094 | INFO     | mean x: 1764042344.5863945
[2025-11-25 05:10:37] 2025-11-25 10:10:05,094 | INFO     | mean y: 3078109.5034013605
[2025-11-25 05:10:37] 2025-11-25 10:10:05,094 | INFO     | intersect: -16033253295.40311
[2025-11-25 05:10:37] 2025-11-25 10:10:05,095 | INFO     | chi2: 2.329062837922635
[2025-11-25 05:10:37] 2025-11-25 10:10:05,095 | INFO     | current chi2=2.329062837922635 (change=26.505818691727505 %)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,096 | INFO     | sum of square deviations: 120627234308.73424
[2025-11-25 05:10:37] 2025-11-25 10:10:05,107 | INFO     | sum of deviations: 1113306696923.44
[2025-11-25 05:10:37] 2025-11-25 10:10:05,107 | INFO     | mean x: 1764042192.0849316
[2025-11-25 05:10:37] 2025-11-25 10:10:05,107 | INFO     | mean y: 3077742.1219178084
[2025-11-25 05:10:37] 2025-11-25 10:10:05,107 | INFO     | intersect: -16277822647.894388
[2025-11-25 05:10:37] 2025-11-25 10:10:05,108 | INFO     | chi2: 2.308065845569339
[2025-11-25 05:10:37] 2025-11-25 10:10:05,108 | INFO     | current chi2=2.308065845569339 (change=0.9015210758342466 %)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,108 | INFO     | right removable region: 729
[2025-11-25 05:10:37] 2025-11-25 10:10:05,109 | INFO     | sum of square deviations: 125652405069.97159
[2025-11-25 05:10:37] 2025-11-25 10:10:05,120 | INFO     | sum of deviations: 531202442382.81537
[2025-11-25 05:10:37] 2025-11-25 10:10:05,120 | INFO     | mean x: 1764042802.0824325
[2025-11-25 05:10:37] 2025-11-25 10:10:05,121 | INFO     | mean y: 3068370.3472972973
[2025-11-25 05:10:37] 2025-11-25 10:10:05,121 | INFO     | intersect: -7454519444.324409
[2025-11-25 05:10:37] 2025-11-25 10:10:05,121 | INFO     | chi2: 3.844388866687356
[2025-11-25 05:10:37] 2025-11-25 10:10:05,122 | INFO     | current chi2=3.844388866687356 (change=35.84260868979961 %)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,122 | INFO     | sum of square deviations: 123122466546.43535
[2025-11-25 05:10:37] 2025-11-25 10:10:05,133 | INFO     | sum of deviations: 482077273052.8234
[2025-11-25 05:10:37] 2025-11-25 10:10:05,134 | INFO     | mean x: 1764042954.5850341
[2025-11-25 05:10:37] 2025-11-25 10:10:05,134 | INFO     | mean y: 3071330.074829932
[2025-11-25 05:10:37] 2025-11-25 10:10:05,134 | INFO     | intersect: -6903913568.360993
[2025-11-25 05:10:37] 2025-11-25 10:10:05,135 | INFO     | chi2: 3.7864562675967797
[2025-11-25 05:10:37] 2025-11-25 10:10:05,135 | INFO     | current chi2=3.7864562675967797 (change=1.506939102664083 %)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,135 | INFO     | left removable region: 20
[2025-11-25 05:10:37] 2025-11-25 10:10:05,136 | INFO     | sum of square deviations: 110513191065.01263
[2025-11-25 05:10:37] 2025-11-25 10:10:05,146 | INFO     | sum of deviations: 797977087557.0646
[2025-11-25 05:10:37] 2025-11-25 10:10:05,146 | INFO     | mean x: 1764042771.593794
[2025-11-25 05:10:37] 2025-11-25 10:10:05,146 | INFO     | mean y: 3097103.923836389
[2025-11-25 05:10:37] 2025-11-25 10:10:05,146 | INFO     | intersect: -12734438566.133934
[2025-11-25 05:10:37] 2025-11-25 10:10:05,147 | INFO     | chi2: 0.07552825575658481
[2025-11-25 05:10:37] 2025-11-25 10:10:05,147 | INFO     | current memory leak: 7.22 B/s (using 709 data points, chi2=0.08)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,148 | INFO     | could have reported an average CPU frequency of 2166 MHz (28 samples)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,148 | INFO     | ..............................
[2025-11-25 05:10:37] 2025-11-25 10:10:05,148 | INFO     | . Timing measurements:
[2025-11-25 05:10:37] 2025-11-25 10:10:05,148 | INFO     | . get job = 0 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,148 | INFO     | . initial setup = 1 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,148 | INFO     | . payload setup = 8 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,149 | INFO     | . stage-in = 0 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,149 | INFO     | . payload execution = 45436 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,149 | INFO     | . stage-out = 4 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,149 | INFO     | . log creation = 0 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,149 | INFO     | ..............................
[2025-11-25 05:10:37] 2025-11-25 10:10:05,240 | INFO     | 
[2025-11-25 05:10:37] 2025-11-25 10:10:05,241 | INFO     | job summary report
[2025-11-25 05:10:37] 2025-11-25 10:10:05,241 | INFO     | --------------------------------------------------
[2025-11-25 05:10:37] 2025-11-25 10:10:05,241 | INFO     | PanDA job id: 6895355496
[2025-11-25 05:10:37] 2025-11-25 10:10:05,241 | INFO     | task id: 47556137
[2025-11-25 05:10:37] 2025-11-25 10:10:05,241 | INFO     | errors: (none)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | pilot state: finished 
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | transexitcode: 0
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | exeerrorcode: 0
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | exeerrordiag: 
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | exitcode: 0
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | exitmsg: OK
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | cpuconsumptiontime: 351402 s
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | nevents: 1000
[2025-11-25 05:10:37] 2025-11-25 10:10:05,242 | INFO     | neventsw: 0
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | pid: 1833
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | pgrp: 1833
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | corecount: 8
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | event service: False
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | sizes: {0: 2284309, 6: 2284571, 11: 2284599, 45449: 2330719, 45453: 2339718, 45456: 2339774, 45462: 2340148}
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | --------------------------------------------------
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | 
[2025-11-25 05:10:37] 2025-11-25 10:10:05,243 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 05:10:37] 2025-11-25 10:10:05,310 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,311 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,311 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,311 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,311 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,313 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 05:10:37] 2025-11-25 10:10:05,314 | INFO     | job 6895355496 has completed (purged errors)
[2025-11-25 05:10:37] 2025-11-25 10:10:05,315 | INFO     | overall cleanup function is called
[2025-11-25 05:10:37] 2025-11-25 10:10:06,330 | INFO     | --- collectZombieJob: --- 10, [1833]
[2025-11-25 05:10:37] 2025-11-25 10:10:06,330 | INFO     | zombie collector waiting for pid 1833
[2025-11-25 05:10:37] 2025-11-25 10:10:06,331 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 05:10:37] 2025-11-25 10:10:06,331 | INFO     | collected zombie processes
[2025-11-25 05:10:37] 2025-11-25 10:10:06,331 | INFO     | will attempt to kill all subprocesses of pid=1833
[2025-11-25 05:10:37] 2025-11-25 10:10:06,425 | INFO     | process IDs to be killed: [1833] (in reverse order)
[2025-11-25 05:10:37] 2025-11-25 10:10:06,483 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 05:10:37] 2025-11-25 10:10:06,483 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 05:10:37] 2025-11-25 10:10:06,488 | INFO     | did not find any defunct processes belonging to 1833
[2025-11-25 05:10:37] 2025-11-25 10:10:06,491 | INFO     | did not find any defunct processes belonging to 1833
[2025-11-25 05:10:37] 2025-11-25 10:10:06,494 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 05:10:37] 2025-11-25 10:10:06,495 | INFO     | ready for new job
[2025-11-25 05:10:37] 2025-11-25 10:10:06,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 05:10:37] 2025-11-25 10:10:06,498 | INFO     | ***************************************
[2025-11-25 05:10:37] 2025-11-25 10:10:06,498 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 05:10:37] 2025-11-25 10:10:06,499 | INFO     | ***************************************
[2025-11-25 05:10:37] 2025-11-25 10:10:06,499 | INFO     | 
[2025-11-25 05:10:37] 2025-11-25 10:10:06,499 | INFO     | architecture information:
[2025-11-25 05:10:37] 2025-11-25 10:10:06,500 | INFO     | executing command: cat /etc/os-release
[2025-11-25 05:10:37] 2025-11-25 10:10:06,517 | INFO     | cat /etc/os-release:
[2025-11-25 05:10:37] NAME="CentOS Linux"
[2025-11-25 05:10:37] VERSION="7 (Core)"
[2025-11-25 05:10:37] ID="centos"
[2025-11-25 05:10:37] ID_LIKE="rhel fedora"
[2025-11-25 05:10:37] VERSION_ID="7"
[2025-11-25 05:10:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 05:10:37] ANSI_COLOR="0;31"
[2025-11-25 05:10:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 05:10:37] HOME_URL="https://www.centos.org/"
[2025-11-25 05:10:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 05:10:37] 
[2025-11-25 05:10:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 05:10:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 05:10:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 05:10:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 05:10:37] 
[2025-11-25 05:10:37] 2025-11-25 10:10:06,517 | INFO     | ***************************************
[2025-11-25 05:10:37] 2025-11-25 10:10:07,021 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 05:10:37] 2025-11-25 10:10:07,041 | INFO     | sufficient remaining disk space (17471373312 B)
[2025-11-25 05:10:37] 2025-11-25 10:10:07,041 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 05:10:37] 2025-11-25 10:10:07,042 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 05:10:37] 2025-11-25 10:10:07,042 | INFO     | update_server=False
[2025-11-25 05:10:37] 2025-11-25 10:10:07,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 05:10:37] 2025-11-25 10:10:07,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 05:10:37] 2025-11-25 10:10:07,043 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:10:37] 2025-11-25 10:10:07,043 | INFO     | aborting loop
[2025-11-25 05:10:37] 2025-11-25 10:10:07,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 05:10:37] 2025-11-25 10:10:07,123 | INFO     | all job control threads have been joined
[2025-11-25 05:10:37] 2025-11-25 10:10:07,290 | INFO     | all data control threads have been joined
[2025-11-25 05:10:37] 2025-11-25 10:10:08,048 | INFO     | [job] retrieve thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,049 | INFO     | [job] job monitor thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,049 | INFO     | [job] queue monitor thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,084 | INFO     | [job] validate thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,129 | INFO     | [job] control thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,192 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,295 | INFO     | [data] control thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,407 | INFO     | all payload control threads have been joined
[2025-11-25 05:10:37] 2025-11-25 10:10:08,569 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,620 | INFO     | [payload] validate_post thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:08,955 | INFO     | [data] copytool_in thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:09,048 | INFO     | [data] copytool_out thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:09,055 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 05:10:37] 2025-11-25 10:10:09,070 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:09,412 | INFO     | [payload] control thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:09,618 | INFO     | [payload] failed_post thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:13,061 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:17,777 | INFO     | job.realtimelogging is not enabled
[2025-11-25 05:10:37] 2025-11-25 10:10:18,783 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 05:10:37] 2025-11-25 10:10:20,310 | INFO     | [monitor] cgroup control has ended
[2025-11-25 05:10:37] 2025-11-25 10:10:20,833 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140015650019136)>', '<ExcThread(monitor, started 140014390343424)>']
[2025-11-25 05:10:37] 2025-11-25 10:10:25,848 | INFO     | all workflow threads have been joined
[2025-11-25 05:10:37] 2025-11-25 10:10:25,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 05:10:37] 2025-11-25 10:10:25,849 | INFO     | traces error code: 0
[2025-11-25 05:10:37] 2025-11-25 10:10:25,850 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 05:10:37] 2025-11-25 10:10:37,307 | INFO     | PID=27708 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 05:10:37] 2025-11-25 10:10:37,308 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 05:10:37] 2025-11-25 10:10:37,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 05:10:37] 2025-11-25 10:10:37,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 05:10:37] 2025-11-25 10:10:37,309 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 05:10:37] 2025-11-25 10:10:37,309 | INFO     | [monitor] control thread has ended
[2025-11-25 05:10:37] 2025-11-25 10:10:37,426 [wrapper] ==== pilot stdout END ====
[2025-11-25 05:10:37] 2025-11-25 10:10:37,431 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 05:10:37] 2025-11-25 10:10:37,435 [wrapper] pilotpid: 27708
[2025-11-25 05:10:37] 2025-11-25 10:10:37,439 [wrapper] Pilot exit status: 0
[2025-11-25 05:10:37] 2025-11-25 10:10:37,457 [wrapper] pandaids: 6895355496 6895355496 6895355496
[2025-11-25 05:10:37] 2025-11-25 10:10:37,499 [wrapper] cleanup supervisor_pilot 27633 27709
[2025-11-25 05:10:37] 2025-11-25 10:10:37,504 [wrapper] Test setup, not cleaning
[2025-11-25 05:10:37] 2025-11-25 10:10:37,509 [wrapper] apfmon messages muted
[2025-11-25 05:10:37] 2025-11-25 10:10:37,513 [wrapper] ==== wrapper stdout END ====
[2025-11-25 05:10:37] 2025-11-25 10:10:37,518 [wrapper] ==== wrapper stderr END ====
[2025-11-25 05:10:37]  *** Error codes and diagnostics ***
[2025-11-25 05:10:37]     "exeErrorCode": 0,
[2025-11-25 05:10:37]     "exeErrorDiag": "",
[2025-11-25 05:10:37]     "pilotErrorCode": 0,
[2025-11-25 05:10:37]     "pilotErrorDiag": "",
[2025-11-25 05:10:37]  *** Listing of results directory ***
[2025-11-25 05:10:37] total 1712948
[2025-11-25 05:10:37] drwx------ 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 02:37 pilot3.tar.gz
[2025-11-25 05:10:37] -rwx------ 1 boincer umatlas     36292 Nov 23 02:39 runpilot2-wrapper.sh
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 02:39 queuedata.json
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas       100 Nov 24 09:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 05:10:37] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 09:56 run_atlas
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas       105 Nov 24 09:56 job.xml
[2025-11-25 05:10:37] -rw-r--r-- 3 boincer umatlas 409921109 Nov 24 09:56 EVNT.47483658._000662.pool.root.1
[2025-11-25 05:10:37] -rw-r--r-- 3 boincer umatlas 409921109 Nov 24 09:56 ATLAS.root_0
[2025-11-25 05:10:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:56 start_atlas.sh
[2025-11-25 05:10:37] drwxrwx--x 2 boincer umatlas      4096 Nov 24 09:56 shared
[2025-11-25 05:10:37] -rw-r--r-- 2 boincer umatlas    590093 Nov 24 09:56 input.tar.gz
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas         0 Nov 24 09:56 boinc_lockfile
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 16:31 pandaJob.out
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas        57 Nov 24 16:31 setup.sh.local
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas    991801 Nov 24 16:32 agis_schedconf.cvmfs.json
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas       532 Nov 25 04:58 boinc_task_state.xml
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas 913807550 Nov 25 05:09 HITS.47556137._006573.pool.root.1
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas      5911 Nov 25 05:09 init_data.xml
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas      1062 Nov 25 05:09 memory_monitor_summary.json
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas   1516240 Nov 25 05:09 agis_ddmendpoints.agis.ALL.json
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas   1990295 Nov 25 05:09 log.47556137._006573.job.log.tgz.1
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas      8665 Nov 25 05:10 heartbeat.json
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 05:10 boinc_mmap_file
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas        29 Nov 25 05:10 wrapper_checkpoint.txt
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas        96 Nov 25 05:10 pilot_heartbeat.json
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas       745 Nov 25 05:10 pilotlog.txt
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas   6253365 Nov 25 05:10 log.47556137._006573.job.log.1
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas       353 Nov 25 05:10 output.list
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas       620 Nov 25 05:10 runtime_log
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas   8263680 Nov 25 05:10 result.tar.gz
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas      9423 Nov 25 05:10 runtime_log.err
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas       917 Nov 25 05:10 dH6KDmYsJh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRjKKDmRM6Ehm.diag
[2025-11-25 05:10:37] -rw-r--r-- 1 boincer umatlas     25365 Nov 25 05:10 stderr.txt
[2025-11-25 05:10:37] HITS file was successfully produced:
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas 913807550 Nov 25 05:09 shared/HITS.pool.root.1
[2025-11-25 05:10:37]  *** Contents of shared directory: ***
[2025-11-25 05:10:37] total 1301380
[2025-11-25 05:10:37] -rw-r--r-- 3 boincer umatlas 409921109 Nov 24 09:56 ATLAS.root_0
[2025-11-25 05:10:37] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:56 start_atlas.sh
[2025-11-25 05:10:37] -rw-r--r-- 2 boincer umatlas    590093 Nov 24 09:56 input.tar.gz
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas 913807550 Nov 25 05:09 HITS.pool.root.1
[2025-11-25 05:10:37] -rw------- 1 boincer umatlas   8263680 Nov 25 05:10 result.tar.gz
05:10:39 (22935): run_atlas exited; CPU time 347799.164541
05:10:39 (22935): called boinc_finish(0)

</stderr_txt>
]]>

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