Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:48:08 (3738998): wrapper (7.7.26015): starting
17:48:08 (3738998): wrapper: running run_atlas (--nthreads 2)
[2025-11-26 17:48:08] Arguments: --nthreads 2
[2025-11-26 17:48:08] Threads: 2
[2025-11-26 17:48:08] Checking for CVMFS
[2025-11-26 17:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:48:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:48:08] 2.9.2.0 2377071 11651 64952 153328 2 81 18747207 36864001 0 130560 0 3743111 99.931 582607 2971 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 17:48:08] CVMFS is ok
[2025-11-26 17:48:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:48:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:48:08] Further information can be found at the LHC@home message board.
[2025-11-26 17:48:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:48:08] Checking for apptainer binary...
[2025-11-26 17:48:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:48:08] Running /usr/bin/apptainer --version
[2025-11-26 17:48:08] apptainer version 1.4.1-1.1
[2025-11-26 17:48:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:48:08] thA334a
[2025-11-26 17:48:08] apptainer works
[2025-11-26 17:48:08] Set ATHENA_PROC_NUMBER=2
[2025-11-26 17:48:08] Set ATHENA_CORE_NUMBER=2
[2025-11-26 17:48:08] Starting ATLAS job with PandaID=6895365738
[2025-11-26 17:48:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:47:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:47:28] 2025-11-27 04:46:52,134 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:47:28] 2025-11-27 04:46:52,142 | INFO     | cat /etc/os-release:
[2025-11-27 05:47:28] NAME="CentOS Linux"
[2025-11-27 05:47:28] VERSION="7 (Core)"
[2025-11-27 05:47:28] ID="centos"
[2025-11-27 05:47:28] ID_LIKE="rhel fedora"
[2025-11-27 05:47:28] VERSION_ID="7"
[2025-11-27 05:47:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:47:28] ANSI_COLOR="0;31"
[2025-11-27 05:47:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:47:28] HOME_URL="https://www.centos.org/"
[2025-11-27 05:47:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:47:28] 
[2025-11-27 05:47:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:47:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:47:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:47:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:47:28] 
[2025-11-27 05:47:28] 2025-11-27 04:46:52,142 | INFO     | ***************************************
[2025-11-27 05:47:28] 2025-11-27 04:46:52,646 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | INFO     | sufficient remaining disk space (502944235520 B)
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | INFO     | update_server=False
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:47:28] 2025-11-27 04:46:52,658 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 05:47:28] 2025-11-27 04:46:52,659 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:47:28] 2025-11-27 04:46:52,659 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:47:28] 2025-11-27 04:46:52,659 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:47:28] 2025-11-27 04:46:52,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:47:28] 2025-11-27 04:46:52,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:47:28] 2025-11-27 04:46:52,659 | INFO     | aborting loop
[2025-11-27 05:47:28] 2025-11-27 04:46:52,728 | INFO     | all job control threads have been joined
[2025-11-27 05:47:28] 2025-11-27 04:46:53,174 | INFO     | all payload control threads have been joined
[2025-11-27 05:47:28] 2025-11-27 04:46:53,290 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:47:28] 2025-11-27 04:46:53,485 | INFO     | all data control threads have been joined
[2025-11-27 05:47:28] 2025-11-27 04:46:53,664 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:53,665 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:53,666 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:53,679 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:53,680 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:53,733 | INFO     | [job] control thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:53,778 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:54,180 | INFO     | [payload] control thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:54,406 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:54,491 | INFO     | [data] control thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:54,663 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:54,680 | INFO     | [job] validate thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:55,015 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:55,074 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:46:57,298 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:47:03,087 | INFO     | job.realtimelogging is not enabled
[2025-11-27 05:47:28] 2025-11-27 04:47:04,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:47:28] 2025-11-27 04:47:21,663 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:47:28] 2025-11-27 04:47:23,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263205148480)>', '<ExcThread(monitor, started 140262852503296)>']
[2025-11-27 05:47:28] 2025-11-27 04:47:23,822 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:47:28] 2025-11-27 04:47:23,823 | INFO     | [monitor] control thread has ended
[2025-11-27 05:47:28] 2025-11-27 04:47:28,612 | INFO     | all workflow threads have been joined
[2025-11-27 05:47:28] 2025-11-27 04:47:28,612 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:47:28] 2025-11-27 04:47:28,613 | INFO     | traces error code: 0
[2025-11-27 05:47:28] 2025-11-27 04:47:28,613 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:47:28] 2025-11-27 04:47:28,655 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:47:28] 2025-11-27 04:47:28,658 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:47:28] 2025-11-27 04:47:28,660 [wrapper] pilotpid: 3742710
[2025-11-27 05:47:28] 2025-11-27 04:47:28,662 [wrapper] Pilot exit status: 0
[2025-11-27 05:47:28] 2025-11-27 04:47:28,668 [wrapper] pandaids: 6895365738
[2025-11-27 05:47:28] 2025-11-27 04:47:28,679 [wrapper] cleanup supervisor_pilot 3821163 3742711
[2025-11-27 05:47:28] 2025-11-27 04:47:28,682 [wrapper] Test setup, not cleaning
[2025-11-27 05:47:28] 2025-11-27 04:47:28,684 [wrapper] apfmon messages muted
[2025-11-27 05:47:28] 2025-11-27 04:47:28,686 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:47:28] 2025-11-27 04:47:28,688 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:47:28]  *** Error codes and diagnostics ***
[2025-11-27 05:47:28]     "exeErrorCode": 0,
[2025-11-27 05:47:28]     "exeErrorDiag": "",
[2025-11-27 05:47:28]     "pilotErrorCode": 0,
[2025-11-27 05:47:28]     "pilotErrorDiag": "",
[2025-11-27 05:47:28]  *** Listing of results directory ***
[2025-11-27 05:47:28] total 1299820
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc    576529 Nov 23 18:39 pilot3.tar.gz
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc      5112 Nov 23 18:48 queuedata.json
[2025-11-27 05:47:28] -rwx------ 1 boinc boinc     36292 Nov 23 18:50 runpilot2-wrapper.sh
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc       100 Nov 26 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:47:28] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 17:48 run_atlas
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc       105 Nov 26 17:48 job.xml
[2025-11-27 05:47:28] -rw-r--r-- 2 boinc boinc 407509128 Nov 26 17:48 EVNT.47483658._000832.pool.root.1
[2025-11-27 05:47:28] -rw-r--r-- 2 boinc boinc    590095 Nov 26 17:48 input.tar.gz
[2025-11-27 05:47:28] -rw-r--r-- 2 boinc boinc     15847 Nov 26 17:48 start_atlas.sh
[2025-11-27 05:47:28] drwxrwx--x 2 boinc boinc      4096 Nov 26 17:48 shared
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc         0 Nov 26 17:48 boinc_setup_complete
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc      6208 Nov 26 17:48 init_data.xml
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc         0 Nov 26 17:48 boinc_lockfile
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc      2782 Nov 26 17:48 pandaJob.out
[2025-11-27 05:47:28] -rw------- 1 boinc boinc    991545 Nov 26 17:48 agis_schedconf.cvmfs.json
[2025-11-27 05:47:28] drwx------ 5 boinc boinc      4096 Nov 26 17:48 pilot3
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc       531 Nov 27 05:43 boinc_task_state.xml
[2025-11-27 05:47:28] -rw------- 1 boinc boinc 905100229 Nov 27 05:46 HITS.47556137._008181.pool.root.1
[2025-11-27 05:47:28] -rw------- 1 boinc boinc        95 Nov 27 05:46 pilot_heartbeat.json
[2025-11-27 05:47:28] -rw------- 1 boinc boinc      1021 Nov 27 05:46 memory_monitor_summary.json
[2025-11-27 05:47:28] -rw------- 1 boinc boinc   1516240 Nov 27 05:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:47:28] -rw------- 1 boinc boinc   1201545 Nov 27 05:46 log.47556137._008181.job.log.tgz.1
[2025-11-27 05:47:28] -rw------- 1 boinc boinc      8558 Nov 27 05:46 heartbeat.json
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc        28 Nov 27 05:47 wrapper_checkpoint.txt
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc      8192 Nov 27 05:47 boinc_mmap_file
[2025-11-27 05:47:28] -rw------- 1 boinc boinc      4628 Nov 27 05:47 pilotlog.txt
[2025-11-27 05:47:28] -rw------- 1 boinc boinc   6046992 Nov 27 05:47 log.47556137._008181.job.log.1
[2025-11-27 05:47:28] -rw------- 1 boinc boinc       353 Nov 27 05:47 output.list
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc       620 Nov 27 05:47 runtime_log
[2025-11-27 05:47:28] -rw------- 1 boinc boinc   7270400 Nov 27 05:47 result.tar.gz
[2025-11-27 05:47:28] -rw------- 1 boinc boinc       666 Nov 27 05:47 tchNDmrPTh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms4KKDmDfnwUn.diag
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc      8903 Nov 27 05:47 runtime_log.err
[2025-11-27 05:47:28] -rw-r--r-- 1 boinc boinc      8903 Nov 27 05:47 stderr.txt
[2025-11-27 05:47:28] HITS file was successfully produced:
[2025-11-27 05:47:28] -rw------- 1 boinc boinc 905100229 Nov 27 05:46 shared/HITS.pool.root.1
[2025-11-27 05:47:28]  *** Contents of shared directory: ***
[2025-11-27 05:47:28] total 1289552
[2025-11-27 05:47:28] -rw-r--r-- 2 boinc boinc 407509128 Nov 26 17:48 ATLAS.root_0
[2025-11-27 05:47:28] -rw-r--r-- 2 boinc boinc    590095 Nov 26 17:48 input.tar.gz
[2025-11-27 05:47:28] -rw-r--r-- 2 boinc boinc     15847 Nov 26 17:48 start_atlas.sh
[2025-11-27 05:47:28] -rw------- 1 boinc boinc 905100229 Nov 27 05:46 HITS.pool.root.1
[2025-11-27 05:47:28] -rw------- 1 boinc boinc   7270400 Nov 27 05:47 result.tar.gz
05:47:30 (3738998): run_atlas exited; CPU time 85475.439331
05:47:30 (3738998): called boinc_finish(0)

</stderr_txt>
]]>

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