Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:43:10 (22636): wrapper (7.7.26015): starting
08:43:10 (22636): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 08:43:10] Arguments: --nthreads 12
[2025-11-24 08:43:10] Threads: 12
[2025-11-24 08:43:10] Checking for CVMFS
[2025-11-24 08:43:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:43:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:43:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:43:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:43:10] 2.11.2.0 3081 284830 96748 153247 0 82 15432786 20275200 1 130560 1 128389634 99.965 16759417 14292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:43:10] CVMFS is ok
[2025-11-24 08:43:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:43:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:43:10] Further information can be found at the LHC@home message board.
[2025-11-24 08:43:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:43:10] Checking for apptainer binary...
[2025-11-24 08:43:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:43:10] Running /usr/bin/apptainer --version
[2025-11-24 08:43:10] apptainer version 1.3.2-1.el7
[2025-11-24 08:43:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:43:12] c-205-29.aglt2.org
[2025-11-24 08:43:12] apptainer works
[2025-11-24 08:43:12] Set ATHENA_PROC_NUMBER=12
[2025-11-24 08:43:12] Set ATHENA_CORE_NUMBER=12
[2025-11-24 08:43:12] Starting ATLAS job with PandaID=6895347437
[2025-11-24 08:43:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:51:27]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:51:27] 2025-11-24 20:50:53,129 | INFO     | monitor loop #1922: job 0:6895347437 is in state 'finished'
[2025-11-24 15:51:27] 2025-11-24 20:50:53,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,361 | INFO     | time since job start (25647s) is within the limit (172800.0s)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,604 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 15:51:27] 2025-11-24 20:50:54,608 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 15:51:27] 2025-11-24 20:50:54,611 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895347437/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,612 | INFO     | extracted standard info from prmon json
[2025-11-24 15:51:27] 2025-11-24 20:50:54,612 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 15:51:27] 2025-11-24 20:50:54,612 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:51:27] 2025-11-24 20:50:54,619 | INFO     | fitting pss+swap vs Time
[2025-11-24 15:51:27] 2025-11-24 20:50:54,620 | INFO     | sum of square deviations: 22973312235.961933
[2025-11-24 15:51:27] 2025-11-24 20:50:54,624 | INFO     | sum of deviations: 372640977808.7432
[2025-11-24 15:51:27] 2025-11-24 20:50:54,624 | INFO     | mean x: 1764004616.6761904
[2025-11-24 15:51:27] 2025-11-24 20:50:54,624 | INFO     | mean y: 3425580.064285714
[2025-11-24 15:51:27] 2025-11-24 20:50:54,624 | INFO     | intersect: -28609793030.544514
[2025-11-24 15:51:27] 2025-11-24 20:50:54,625 | INFO     | chi2: 5.274770521437936
[2025-11-24 15:51:27] 2025-11-24 20:50:54,625 | INFO     | sum of square deviations: 22162584720.80481
[2025-11-24 15:51:27] 2025-11-24 20:50:54,629 | INFO     | sum of deviations: 520882345888.9913
[2025-11-24 15:51:27] 2025-11-24 20:50:54,629 | INFO     | mean x: 1764004464.1783133
[2025-11-24 15:51:27] 2025-11-24 20:50:54,629 | INFO     | mean y: 3453435.243373494
[2025-11-24 15:51:27] 2025-11-24 20:50:54,629 | INFO     | intersect: -41455554845.37952
[2025-11-24 15:51:27] 2025-11-24 20:50:54,630 | INFO     | chi2: 2.6764930557486806
[2025-11-24 15:51:27] 2025-11-24 20:50:54,630 | INFO     | current chi2=2.6764930557486806 (change=49.258587745746105 %)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,630 | INFO     | sum of square deviations: 21371134821.50249
[2025-11-24 15:51:27] 2025-11-24 20:50:54,634 | INFO     | sum of deviations: 544986196011.6726
[2025-11-24 15:51:27] 2025-11-24 20:50:54,634 | INFO     | mean x: 1764004311.6780488
[2025-11-24 15:51:27] 2025-11-24 20:50:54,634 | INFO     | mean y: 3458041.1414634148
[2025-11-24 15:51:27] 2025-11-24 20:50:54,634 | INFO     | intersect: -44980489119.322
[2025-11-24 15:51:27] 2025-11-24 20:50:54,635 | INFO     | chi2: 2.437707911000483
[2025-11-24 15:51:27] 2025-11-24 20:50:54,635 | INFO     | current chi2=2.437707911000483 (change=8.921567879106766 %)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,635 | INFO     | right removable region: 409
[2025-11-24 15:51:27] 2025-11-24 20:50:54,636 | INFO     | sum of square deviations: 22162539580.804813
[2025-11-24 15:51:27] 2025-11-24 20:50:54,639 | INFO     | sum of deviations: 235112306188.51822
[2025-11-24 15:51:27] 2025-11-24 20:50:54,639 | INFO     | mean x: 1764004769.1783133
[2025-11-24 15:51:27] 2025-11-24 20:50:54,639 | INFO     | mean y: 3451367.1686746986
[2025-11-24 15:51:27] 2025-11-24 20:50:54,640 | INFO     | intersect: -18710073222.236576
[2025-11-24 15:51:27] 2025-11-24 20:50:54,640 | INFO     | chi2: 2.9636910651197432
[2025-11-24 15:51:27] 2025-11-24 20:50:54,640 | INFO     | current chi2=2.9636910651197432 (change=43.81383885659878 %)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,641 | INFO     | sum of square deviations: 21371069613.14399
[2025-11-24 15:51:27] 2025-11-24 20:50:54,644 | INFO     | sum of deviations: 204088086563.84146
[2025-11-24 15:51:27] 2025-11-24 20:50:54,644 | INFO     | mean x: 1764004921.6804879
[2025-11-24 15:51:27] 2025-11-24 20:50:54,645 | INFO     | mean y: 3457336.7926829266
[2025-11-24 15:51:27] 2025-11-24 20:50:54,645 | INFO     | intersect: -16842325100.486403
[2025-11-24 15:51:27] 2025-11-24 20:50:54,645 | INFO     | chi2: 2.913237159920772
[2025-11-24 15:51:27] 2025-11-24 20:50:54,645 | INFO     | current chi2=2.913237159920772 (change=1.7024009618537248 %)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,645 | INFO     | left removable region: 20
[2025-11-24 15:51:27] 2025-11-24 20:50:54,646 | INFO     | sum of square deviations: 18252580609.40354
[2025-11-24 15:51:27] 2025-11-24 20:50:54,649 | INFO     | sum of deviations: 338794779144.1489
[2025-11-24 15:51:27] 2025-11-24 20:50:54,649 | INFO     | mean x: 1764004891.1799486
[2025-11-24 15:51:27] 2025-11-24 20:50:54,649 | INFO     | mean y: 3498434.4550128533
[2025-11-24 15:51:27] 2025-11-24 20:50:54,650 | INFO     | intersect: -32739030433.414413
[2025-11-24 15:51:27] 2025-11-24 20:50:54,650 | INFO     | chi2: 0.03703878917511082
[2025-11-24 15:51:27] 2025-11-24 20:50:54,650 | INFO     | current memory leak: 18.56 B/s (using 389 data points, chi2=0.04)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,650 | INFO     | could have reported an average CPU frequency of 2330 MHz (18 samples)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | ..............................
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . Timing measurements:
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . get job = 0 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . initial setup = 2 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . payload setup = 7 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . stage-in = 0 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . payload execution = 25605 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,651 | INFO     | . stage-out = 3 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,652 | INFO     | . log creation = 0 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,652 | INFO     | ..............................
[2025-11-24 15:51:27] 2025-11-24 20:50:54,741 | INFO     | 
[2025-11-24 15:51:27] 2025-11-24 20:50:54,741 | INFO     | job summary report
[2025-11-24 15:51:27] 2025-11-24 20:50:54,742 | INFO     | --------------------------------------------------
[2025-11-24 15:51:27] 2025-11-24 20:50:54,742 | INFO     | PanDA job id: 6895347437
[2025-11-24 15:51:27] 2025-11-24 20:50:54,742 | INFO     | task id: 47556137
[2025-11-24 15:51:27] 2025-11-24 20:50:54,742 | INFO     | errors: (none)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,742 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:51:27] 2025-11-24 20:50:54,742 | INFO     | pilot state: finished 
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | transexitcode: 0
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | exeerrorcode: 0
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | exeerrordiag: 
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | exitcode: 0
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | exitmsg: OK
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | cpuconsumptiontime: 294186 s
[2025-11-24 15:51:27] 2025-11-24 20:50:54,743 | INFO     | nevents: 1000
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | neventsw: 0
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | pid: 32685
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | pgrp: 32685
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | corecount: 12
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | event service: False
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | sizes: {0: 2284088, 1: 2284287, 5: 2284549, 11: 2284605, 25616: 2321786, 25620: 2330780, 25624: 2330964, 25631: 2331210}
[2025-11-24 15:51:27] 2025-11-24 20:50:54,744 | INFO     | --------------------------------------------------
[2025-11-24 15:51:27] 2025-11-24 20:50:54,745 | INFO     | 
[2025-11-24 15:51:27] 2025-11-24 20:50:54,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 15:51:27] 2025-11-24 20:50:54,769 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,769 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,769 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,769 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,770 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,770 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:51:27] 2025-11-24 20:50:54,773 | INFO     | job 6895347437 has completed (purged errors)
[2025-11-24 15:51:27] 2025-11-24 20:50:54,773 | INFO     | overall cleanup function is called
[2025-11-24 15:51:27] 2025-11-24 20:50:55,789 | INFO     | --- collectZombieJob: --- 10, [32685]
[2025-11-24 15:51:27] 2025-11-24 20:50:55,789 | INFO     | zombie collector waiting for pid 32685
[2025-11-24 15:51:27] 2025-11-24 20:50:55,790 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:51:27] 2025-11-24 20:50:55,790 | INFO     | collected zombie processes
[2025-11-24 15:51:27] 2025-11-24 20:50:55,790 | INFO     | will attempt to kill all subprocesses of pid=32685
[2025-11-24 15:51:27] 2025-11-24 20:50:55,883 | INFO     | process IDs to be killed: [32685] (in reverse order)
[2025-11-24 15:51:27] 2025-11-24 20:50:55,934 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:51:27] 2025-11-24 20:50:55,934 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:51:27] 2025-11-24 20:50:55,938 | INFO     | did not find any defunct processes belonging to 32685
[2025-11-24 15:51:27] 2025-11-24 20:50:55,942 | INFO     | did not find any defunct processes belonging to 32685
[2025-11-24 15:51:27] 2025-11-24 20:50:55,944 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:51:27] 2025-11-24 20:50:55,944 | INFO     | ready for new job
[2025-11-24 15:51:27] 2025-11-24 20:50:55,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:51:27] 2025-11-24 20:50:55,947 | INFO     | ***************************************
[2025-11-24 15:51:27] 2025-11-24 20:50:55,947 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:51:27] 2025-11-24 20:50:55,947 | INFO     | ***************************************
[2025-11-24 15:51:27] 2025-11-24 20:50:55,947 | INFO     | 
[2025-11-24 15:51:27] 2025-11-24 20:50:55,947 | INFO     | architecture information:
[2025-11-24 15:51:27] 2025-11-24 20:50:55,948 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:51:27] 2025-11-24 20:50:55,963 | INFO     | cat /etc/os-release:
[2025-11-24 15:51:27] NAME="CentOS Linux"
[2025-11-24 15:51:27] VERSION="7 (Core)"
[2025-11-24 15:51:27] ID="centos"
[2025-11-24 15:51:27] ID_LIKE="rhel fedora"
[2025-11-24 15:51:27] VERSION_ID="7"
[2025-11-24 15:51:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:51:27] ANSI_COLOR="0;31"
[2025-11-24 15:51:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:51:27] HOME_URL="https://www.centos.org/"
[2025-11-24 15:51:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:51:27] 
[2025-11-24 15:51:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:51:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:51:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:51:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:51:27] 
[2025-11-24 15:51:27] 2025-11-24 20:50:55,963 | INFO     | ***************************************
[2025-11-24 15:51:27] 2025-11-24 20:50:56,466 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 15:51:27] 2025-11-24 20:50:56,483 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-24 15:51:27] 2025-11-24 20:50:56,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:51:27] 2025-11-24 20:50:56,483 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:51:27] 2025-11-24 20:50:56,483 | INFO     | update_server=False
[2025-11-24 15:51:27] 2025-11-24 20:50:56,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:51:27] 2025-11-24 20:50:56,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:51:27] 2025-11-24 20:50:56,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:51:27] 2025-11-24 20:50:56,637 | INFO     | aborting loop
[2025-11-24 15:51:27] 2025-11-24 20:50:56,664 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:51:27] 2025-11-24 20:50:56,910 | INFO     | all payload control threads have been joined
[2025-11-24 15:51:27] 2025-11-24 20:50:56,940 | INFO     | all data control threads have been joined
[2025-11-24 15:51:27] 2025-11-24 20:50:57,489 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,490 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,564 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,643 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,648 | INFO     | all job control threads have been joined
[2025-11-24 15:51:27] 2025-11-24 20:50:57,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,665 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,718 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:51:27] 2025-11-24 20:50:57,915 | INFO     | [payload] control thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:57,946 | INFO     | [data] control thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,249 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,653 | INFO     | [job] control thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,670 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,749 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,932 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,951 | INFO     | [job] validate thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:50:58,976 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:51:01,724 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:51:27] 2025-11-24 20:51:08,599 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:51:27] 2025-11-24 20:51:10,150 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140476923725632)>', '<ExcThread(monitor, started 140476334192384)>']
[2025-11-24 15:51:27] 2025-11-24 20:51:15,176 | INFO     | all workflow threads have been joined
[2025-11-24 15:51:27] 2025-11-24 20:51:15,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:51:27] 2025-11-24 20:51:15,176 | INFO     | traces error code: 0
[2025-11-24 15:51:27] 2025-11-24 20:51:15,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | INFO     | PID=26316 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 15:51:27] 2025-11-24 20:51:27,564 | INFO     | [monitor] control thread has ended
[2025-11-24 15:51:27] 2025-11-24 20:51:27,658 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:51:27] 2025-11-24 20:51:27,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:51:27] 2025-11-24 20:51:27,666 [wrapper] pilotpid: 26316
[2025-11-24 15:51:27] 2025-11-24 20:51:27,669 [wrapper] Pilot exit status: 0
[2025-11-24 15:51:27] 2025-11-24 20:51:27,684 [wrapper] pandaids: 6895347437
[2025-11-24 15:51:27] 2025-11-24 20:51:27,725 [wrapper] cleanup supervisor_pilot 17002 26317
[2025-11-24 15:51:27] 2025-11-24 20:51:27,729 [wrapper] Test setup, not cleaning
[2025-11-24 15:51:27] 2025-11-24 20:51:27,733 [wrapper] apfmon messages muted
[2025-11-24 15:51:27] 2025-11-24 20:51:27,737 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:51:27] 2025-11-24 20:51:27,740 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:51:27]  *** Error codes and diagnostics ***
[2025-11-24 15:51:27]     "exeErrorCode": 0,
[2025-11-24 15:51:27]     "exeErrorDiag": "",
[2025-11-24 15:51:27]     "pilotErrorCode": 0,
[2025-11-24 15:51:27]     "pilotErrorDiag": "",
[2025-11-24 15:51:27]  *** Listing of results directory ***
[2025-11-24 15:51:27] total 1315216
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-24 15:51:27] -rwx------ 1 boincer umatlas     36292 Nov 22 14:36 runpilot2-wrapper.sh
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:36 queuedata.json
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas       100 Nov 24 08:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:51:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 08:43 run_atlas
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas       105 Nov 24 08:43 job.xml
[2025-11-24 15:51:27] -rw-r--r-- 2 boincer umatlas 408347666 Nov 24 08:43 EVNT.47483658._000471.pool.root.1
[2025-11-24 15:51:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:43 start_atlas.sh
[2025-11-24 15:51:27] drwxrwx--x 2 boincer umatlas      4096 Nov 24 08:43 shared
[2025-11-24 15:51:27] -rw-r--r-- 2 boincer umatlas    590104 Nov 24 08:43 input.tar.gz
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas         0 Nov 24 08:43 boinc_lockfile
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 08:43 pandaJob.out
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas        57 Nov 24 08:43 setup.sh.local
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas    988280 Nov 24 08:43 agis_schedconf.cvmfs.json
[2025-11-24 15:51:27] drwx------ 5 boincer umatlas      4096 Nov 24 08:43 pilot3
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas       533 Nov 24 15:41 boinc_task_state.xml
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 15:49 init_data.xml
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas 922964583 Nov 24 15:50 HITS.47556137._004669.pool.root.1
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas        95 Nov 24 15:50 pilot_heartbeat.json
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas      1061 Nov 24 15:50 memory_monitor_summary.json
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas   1516227 Nov 24 15:50 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas   2184475 Nov 24 15:50 log.47556137._004669.job.log.tgz.1
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas      8666 Nov 24 15:50 heartbeat.json
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 15:51 boinc_mmap_file
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas        29 Nov 24 15:51 wrapper_checkpoint.txt
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas       815 Nov 24 15:51 pilotlog.txt
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas   3588621 Nov 24 15:51 log.47556137._004669.job.log.1
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas       353 Nov 24 15:51 output.list
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas       620 Nov 24 15:51 runtime_log
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas   5795840 Nov 24 15:51 result.tar.gz
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 15:51 runtime_log.err
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas       670 Nov 24 15:51 6qaLDmXa8g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqLKKDmWyoNQo.diag
[2025-11-24 15:51:27] -rw-r--r-- 1 boincer umatlas     21308 Nov 24 15:51 stderr.txt
[2025-11-24 15:51:27] HITS file was successfully produced:
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas 922964583 Nov 24 15:50 shared/HITS.pool.root.1
[2025-11-24 15:51:27]  *** Contents of shared directory: ***
[2025-11-24 15:51:27] total 1306380
[2025-11-24 15:51:27] -rw-r--r-- 2 boincer umatlas 408347666 Nov 24 08:43 ATLAS.root_0
[2025-11-24 15:51:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:43 start_atlas.sh
[2025-11-24 15:51:27] -rw-r--r-- 2 boincer umatlas    590104 Nov 24 08:43 input.tar.gz
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas 922964583 Nov 24 15:50 HITS.pool.root.1
[2025-11-24 15:51:27] -rw------- 1 boincer umatlas   5795840 Nov 24 15:51 result.tar.gz
15:51:28 (22636): run_atlas exited; CPU time 287378.610066
15:51:29 (22636): called boinc_finish(0)

</stderr_txt>
]]>

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