Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:03:42 (25027): wrapper (7.7.26015): starting
01:03:42 (25027): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:03:42] Arguments: --nthreads 8
[2025-11-27 01:03:42] Threads: 8
[2025-11-27 01:03:42] Checking for CVMFS
[2025-11-27 01:03:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:03:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:03:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:03:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:03:44] 2.11.2.0 26010 285938 140276 153340 1 85 22188104 25165825 1288 130560 11 140758945 99.888 74917599 2765 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 01:03:44] CVMFS is ok
[2025-11-27 01:03:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:03:44] Checking for apptainer binary...
[2025-11-27 01:03:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:03:44] Running /usr/bin/apptainer --version
[2025-11-27 01:03:44] apptainer version 1.3.2-1.el7
[2025-11-27 01:03:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:04:07] cg-vwn216.simple-grid.lan
[2025-11-27 01:04:07] apptainer works
[2025-11-27 01:04:07] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:04:07] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:04:07] Starting ATLAS job with PandaID=6895365686
[2025-11-27 01:04:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:56:49]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:56:49] 2025-11-27 22:56:06,983 | INFO     | monitor loop #5529: job 0:6895365686 is in state 'finished'
[2025-11-27 23:56:49] 2025-11-27 22:56:06,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:56:49] 2025-11-27 22:56:08,901 | INFO     | time since job start (82080s) is within the limit (172800.0s)
[2025-11-27 23:56:49] 2025-11-27 22:56:09,488 | INFO     | monitor loop #5530: job 0:6895365686 is in state 'finished'
[2025-11-27 23:56:49] 2025-11-27 22:56:09,489 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:56:49] 2025-11-27 22:56:10,912 | INFO     | time since job start (82082s) is within the limit (172800.0s)
[2025-11-27 23:56:49] 2025-11-27 22:56:11,993 | INFO     | monitor loop #5531: job 0:6895365686 is in state 'finished'
[2025-11-27 23:56:49] 2025-11-27 22:56:11,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,170 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:56:49] 2025-11-27 22:56:12,171 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 23:56:49] 2025-11-27 22:56:12,173 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6895365686/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,174 | INFO     | extracted standard info from prmon json
[2025-11-27 23:56:49] 2025-11-27 22:56:12,174 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:56:49] 2025-11-27 22:56:12,174 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:56:49] 2025-11-27 22:56:12,216 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:56:49] 2025-11-27 22:56:12,218 | INFO     | sum of square deviations: 739430913416.4421
[2025-11-27 23:56:49] 2025-11-27 22:56:12,275 | INFO     | sum of deviations: 2587938251456.545
[2025-11-27 23:56:49] 2025-11-27 22:56:12,275 | INFO     | mean x: 1764243291.584581
[2025-11-27 23:56:49] 2025-11-27 22:56:12,276 | INFO     | mean y: 2852557.3181137727
[2025-11-27 23:56:49] 2025-11-27 22:56:12,276 | INFO     | intersect: -6171832076.939179
[2025-11-27 23:56:49] 2025-11-27 22:56:12,277 | INFO     | chi2: 17.02564671059433
[2025-11-27 23:56:49] 2025-11-27 22:56:12,279 | INFO     | sum of square deviations: 731160390975.5385
[2025-11-27 23:56:49] 2025-11-27 22:56:12,326 | INFO     | sum of deviations: 3038301958051.3086
[2025-11-27 23:56:49] 2025-11-27 22:56:12,326 | INFO     | mean x: 1764243139.0886552
[2025-11-27 23:56:49] 2025-11-27 22:56:12,326 | INFO     | mean y: 2860860.7685950412
[2025-11-27 23:56:49] 2025-11-27 22:56:12,326 | INFO     | intersect: -7328366938.401097
[2025-11-27 23:56:49] 2025-11-27 22:56:12,328 | INFO     | chi2: 13.75443413810706
[2025-11-27 23:56:49] 2025-11-27 22:56:12,328 | INFO     | current chi2=13.75443413810706 (change=19.213440922932666 %)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,328 | INFO     | right removable region: 1330
[2025-11-27 23:56:49] 2025-11-27 22:56:12,330 | INFO     | sum of square deviations: 731159507085.5385
[2025-11-27 23:56:49] 2025-11-27 22:56:12,383 | INFO     | sum of deviations: 2044855129567.7063
[2025-11-27 23:56:49] 2025-11-27 22:56:12,383 | INFO     | mean x: 1764243444.0886552
[2025-11-27 23:56:49] 2025-11-27 22:56:12,384 | INFO     | mean y: 2862568.629601803
[2025-11-27 23:56:49] 2025-11-27 22:56:12,384 | INFO     | intersect: -4931248554.169253
[2025-11-27 23:56:49] 2025-11-27 22:56:12,385 | INFO     | chi2: 12.659309010007187
[2025-11-27 23:56:49] 2025-11-27 22:56:12,385 | INFO     | current chi2=12.659309010007187 (change=25.645649617938794 %)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,387 | INFO     | sum of square deviations: 722950008892.0914
[2025-11-27 23:56:49] 2025-11-27 22:56:12,433 | INFO     | sum of deviations: 1648372503659.2605
[2025-11-27 23:56:49] 2025-11-27 22:56:12,433 | INFO     | mean x: 1764243596.59276
[2025-11-27 23:56:49] 2025-11-27 22:56:12,433 | INFO     | mean y: 2869932.172699849
[2025-11-27 23:56:49] 2025-11-27 22:56:12,433 | INFO     | intersect: -4019718903.30859
[2025-11-27 23:56:49] 2025-11-27 22:56:12,435 | INFO     | chi2: 10.436425175088711
[2025-11-27 23:56:49] 2025-11-27 22:56:12,435 | INFO     | current chi2=10.436425175088711 (change=17.559282526094318 %)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,435 | INFO     | left removable region: 20
[2025-11-27 23:56:49] 2025-11-27 22:56:12,437 | INFO     | sum of square deviations: 697094875780.9929
[2025-11-27 23:56:49] 2025-11-27 22:56:12,489 | INFO     | sum of deviations: 2027907692751.6978
[2025-11-27 23:56:49] 2025-11-27 22:56:12,489 | INFO     | mean x: 1764243718.59771
[2025-11-27 23:56:49] 2025-11-27 22:56:12,489 | INFO     | mean y: 2883630.0335877864
[2025-11-27 23:56:49] 2025-11-27 22:56:12,489 | INFO     | intersect: -5129449906.093531
[2025-11-27 23:56:49] 2025-11-27 22:56:12,491 | INFO     | chi2: 6.14341653107782
[2025-11-27 23:56:49] 2025-11-27 22:56:12,491 | INFO     | current memory leak: 2.91 B/s (using 1310 data points, chi2=6.14)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | could have reported an average CPU frequency of 1999 MHz (45 samples)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | ..............................
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | . Timing measurements:
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | . get job = 0 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | . initial setup = 5 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | . payload setup = 129 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | . stage-in = 0 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,493 | INFO     | . payload execution = 81639 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,494 | INFO     | . stage-out = 11 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,494 | INFO     | . log creation = 1 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,494 | INFO     | ..............................
[2025-11-27 23:56:49] 2025-11-27 22:56:12,618 | INFO     | 
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | job summary report
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | --------------------------------------------------
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | PanDA job id: 6895365686
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | task id: 47556149
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | errors: (none)
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | pilot state: finished 
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | transexitcode: 0
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | exeerrorcode: 0
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | exeerrordiag: 
[2025-11-27 23:56:49] 2025-11-27 22:56:12,619 | INFO     | exitcode: 0
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | exitmsg: OK
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | cpuconsumptiontime: 309781 s
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | nevents: 1000
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | neventsw: 0
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | pid: 3006
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | pgrp: 3006
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | corecount: 8
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | event service: False
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | sizes: {0: 2283486, 1: 2284172, 2: 2284371, 13: 2284371, 24: 2284427, 35: 2284455, 45: 2284611, 56: 2284639, 67: 2284667, 77: 2284695, 88: 2284751, 99: 2285059, 10
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | --------------------------------------------------
[2025-11-27 23:56:49] 2025-11-27 22:56:12,620 | INFO     | 
[2025-11-27 23:56:49] 2025-11-27 22:56:12,621 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-11-27 23:56:49] 2025-11-27 22:56:12,921 | INFO     | time since job start (82084s) is within the limit (172800.0s)
[2025-11-27 23:56:49] 2025-11-27 22:56:13,278 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,278 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,278 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,278 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,278 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,279 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,280 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:56:49] 2025-11-27 22:56:13,280 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,280 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:56:49] 2025-11-27 22:56:13,280 | INFO     | job 6895365686 has completed (purged errors)
[2025-11-27 23:56:49] 2025-11-27 22:56:13,280 | INFO     | overall cleanup function is called
[2025-11-27 23:56:49] 2025-11-27 22:56:14,303 | INFO     | --- collectZombieJob: --- 10, [3006]
[2025-11-27 23:56:49] 2025-11-27 22:56:14,304 | INFO     | zombie collector waiting for pid 3006
[2025-11-27 23:56:49] 2025-11-27 22:56:14,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:56:49] 2025-11-27 22:56:14,304 | INFO     | collected zombie processes
[2025-11-27 23:56:49] 2025-11-27 22:56:14,304 | INFO     | will attempt to kill all subprocesses of pid=3006
[2025-11-27 23:56:49] 2025-11-27 22:56:14,419 | INFO     | process IDs to be killed: [3006] (in reverse order)
[2025-11-27 23:56:49] 2025-11-27 22:56:15,357 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:56:49] 2025-11-27 22:56:15,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:56:49] 2025-11-27 22:56:15,360 | INFO     | did not find any defunct processes belonging to 3006
[2025-11-27 23:56:49] 2025-11-27 22:56:15,363 | INFO     | did not find any defunct processes belonging to 3006
[2025-11-27 23:56:49] 2025-11-27 22:56:15,419 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:56:49] 2025-11-27 22:56:15,419 | INFO     | ready for new job
[2025-11-27 23:56:49] 2025-11-27 22:56:15,419 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:56:49] 2025-11-27 22:56:15,424 | INFO     | ***************************************
[2025-11-27 23:56:49] 2025-11-27 22:56:15,424 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:56:49] 2025-11-27 22:56:15,424 | INFO     | ***************************************
[2025-11-27 23:56:49] 2025-11-27 22:56:15,424 | INFO     | 
[2025-11-27 23:56:49] 2025-11-27 22:56:15,425 | INFO     | pilot is running in a VM
[2025-11-27 23:56:49] 2025-11-27 22:56:15,425 | INFO     | architecture information:
[2025-11-27 23:56:49] 2025-11-27 22:56:15,440 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:56:49] 2025-11-27 22:56:15,631 | INFO     | cat /etc/os-release:
[2025-11-27 23:56:49] NAME="CentOS Linux"
[2025-11-27 23:56:49] VERSION="7 (Core)"
[2025-11-27 23:56:49] ID="centos"
[2025-11-27 23:56:49] ID_LIKE="rhel fedora"
[2025-11-27 23:56:49] VERSION_ID="7"
[2025-11-27 23:56:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:56:49] ANSI_COLOR="0;31"
[2025-11-27 23:56:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:56:49] HOME_URL="https://www.centos.org/"
[2025-11-27 23:56:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:56:49] 
[2025-11-27 23:56:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:56:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:56:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:56:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:56:49] 
[2025-11-27 23:56:49] 2025-11-27 22:56:15,631 | INFO     | ***************************************
[2025-11-27 23:56:49] 2025-11-27 22:56:16,135 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-11-27 23:56:49] 2025-11-27 22:56:16,370 | INFO     | sufficient remaining disk space (495290679296 B)
[2025-11-27 23:56:49] 2025-11-27 22:56:16,370 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:56:49] 2025-11-27 22:56:16,371 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:56:49] 2025-11-27 22:56:16,371 | INFO     | update_server=False
[2025-11-27 23:56:49] 2025-11-27 22:56:16,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:56:49] 2025-11-27 22:56:16,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:56:49] 2025-11-27 22:56:16,372 | INFO     | aborting loop
[2025-11-27 23:56:49] 2025-11-27 22:56:16,572 | INFO     | all job control threads have been joined
[2025-11-27 23:56:49] 2025-11-27 22:56:16,658 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:56:49] 2025-11-27 22:56:16,765 | INFO     | all payload control threads have been joined
[2025-11-27 23:56:49] 2025-11-27 22:56:16,988 | INFO     | all data control threads have been joined
[2025-11-27 23:56:49] 2025-11-27 22:56:17,377 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,378 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,537 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:56:49] 2025-11-27 22:56:17,559 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,576 | INFO     | [job] validate thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,579 | INFO     | [job] control thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,633 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:56:49] 2025-11-27 22:56:17,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,746 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,772 | INFO     | [payload] control thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,784 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:17,995 | INFO     | [data] control thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:18,180 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:18,510 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:18,639 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:18,854 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:19,544 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:20,667 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:56:49] 2025-11-27 22:56:30,722 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:56:49] 2025-11-27 22:56:32,680 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140572669966144)>', '<ExcThread(monitor, started 140572215973632)>']
[2025-11-27 23:56:49] 2025-11-27 22:56:37,706 | INFO     | all workflow threads have been joined
[2025-11-27 23:56:49] 2025-11-27 22:56:37,707 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:56:49] 2025-11-27 22:56:37,707 | INFO     | traces error code: 0
[2025-11-27 23:56:49] 2025-11-27 22:56:37,707 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:56:49] 2025-11-27 22:56:46,063 | INFO     | PID=28838 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:56:49] 2025-11-27 22:56:46,064 | INFO     | .. there are 9 such processes running
[2025-11-27 23:56:49] 2025-11-27 22:56:46,065 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:56:49] 2025-11-27 22:56:46,065 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:56:49] 2025-11-27 22:56:46,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:56:49] 2025-11-27 22:56:46,066 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:56:49] 2025-11-27 22:56:46,066 | INFO     | [monitor] control thread has ended
[2025-11-27 23:56:49] 2025-11-27 22:56:46,366 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:56:49] 2025-11-27 22:56:46,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:56:49] 2025-11-27 22:56:46,576 [wrapper] pilotpid: 28838
[2025-11-27 23:56:49] 2025-11-27 22:56:46,675 [wrapper] Pilot exit status: 0
[2025-11-27 23:56:49] 2025-11-27 22:56:47,016 [wrapper] pandaids: 6895365686
[2025-11-27 23:56:49] 2025-11-27 22:56:47,601 [wrapper] cleanup supervisor_pilot  3031 28839
[2025-11-27 23:56:49] 2025-11-27 22:56:47,644 [wrapper] Test setup, not cleaning
[2025-11-27 23:56:49] 2025-11-27 22:56:47,686 [wrapper] apfmon messages muted
[2025-11-27 23:56:49] 2025-11-27 22:56:47,775 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:56:49] 2025-11-27 22:56:47,876 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:56:49]  *** Error codes and diagnostics ***
[2025-11-27 23:56:49]     "exeErrorCode": 0,
[2025-11-27 23:56:49]     "exeErrorDiag": "",
[2025-11-27 23:56:49]     "pilotErrorCode": 0,
[2025-11-27 23:56:49]     "pilotErrorDiag": "",
[2025-11-27 23:56:49]  *** Listing of results directory ***
[2025-11-27 23:56:49] total 1317004
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc    576529 Nov 23 18:39 pilot3.tar.gz
[2025-11-27 23:56:49] -rwx------. 1 boinc boinc     36292 Nov 23 18:42 runpilot2-wrapper.sh
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc      5112 Nov 23 18:42 queuedata.json
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc       100 Nov 27 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:56:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 01:03 run_atlas
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc       105 Nov 27 01:03 job.xml
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc      6392 Nov 27 01:03 init_data.xml
[2025-11-27 23:56:49] -rw-r--r--. 2 boinc boinc 409210697 Nov 27 01:03 EVNT.47483658._001179.pool.root.1
[2025-11-27 23:56:49] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:03 start_atlas.sh
[2025-11-27 23:56:49] drwxrwx--x. 2 boinc boinc        68 Nov 27 01:03 shared
[2025-11-27 23:56:49] -rw-r--r--. 2 boinc boinc    590097 Nov 27 01:03 input.tar.gz
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc         0 Nov 27 01:03 boinc_lockfile
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc      2785 Nov 27 01:04 pandaJob.out
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc    991538 Nov 27 01:08 agis_schedconf.cvmfs.json
[2025-11-27 23:56:49] drwx------. 5 boinc boinc      4096 Nov 27 01:08 pilot3
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc       533 Nov 27 23:32 boinc_task_state.xml
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc 908810093 Nov 27 23:53 HITS.47556149._001660.pool.root.1
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc      1027 Nov 27 23:54 memory_monitor_summary.json
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc   1516240 Nov 27 23:54 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc   2415802 Nov 27 23:54 log.47556149._001660.job.log.tgz.1
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc      8638 Nov 27 23:56 heartbeat.json
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc      8192 Nov 27 23:56 boinc_mmap_file
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc        29 Nov 27 23:56 wrapper_checkpoint.txt
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc        95 Nov 27 23:56 pilot_heartbeat.json
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc       820 Nov 27 23:56 pilotlog.txt
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc  10930971 Nov 27 23:56 log.47556149._001660.job.log.1
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc       353 Nov 27 23:56 output.list
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc       620 Nov 27 23:56 runtime_log
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc  13363200 Nov 27 23:56 result.tar.gz
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc       662 Nov 27 23:56 WdKKDmhHTh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVfIKDmqLEENn.diag
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc      8833 Nov 27 23:56 runtime_log.err
[2025-11-27 23:56:49] -rw-r--r--. 1 boinc boinc     21219 Nov 27 23:56 stderr.txt
[2025-11-27 23:56:49] HITS file was successfully produced:
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc 908810093 Nov 27 23:53 shared/HITS.pool.root.1
[2025-11-27 23:56:49]  *** Contents of shared directory: ***
[2025-11-27 23:56:49] total 1300780
[2025-11-27 23:56:49] -rw-r--r--. 2 boinc boinc 409210697 Nov 27 01:03 ATLAS.root_0
[2025-11-27 23:56:49] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:03 start_atlas.sh
[2025-11-27 23:56:49] -rw-r--r--. 2 boinc boinc    590097 Nov 27 01:03 input.tar.gz
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc 908810093 Nov 27 23:53 HITS.pool.root.1
[2025-11-27 23:56:49] -rw-------. 1 boinc boinc  13363200 Nov 27 23:56 result.tar.gz
23:56:51 (25027): run_atlas exited; CPU time 310329.969583
23:56:51 (25027): called boinc_finish(0)

</stderr_txt>
]]>

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