Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:44:22 (31072): wrapper (7.7.26015): starting
09:44:22 (31072): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 09:44:22] Arguments: --nthreads 8
[2025-11-24 09:44:22] Threads: 8
[2025-11-24 09:44:22] Checking for CVMFS
[2025-11-24 09:44:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:44:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:44:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:44:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:44:22] 2.11.2.0 2856 141975 84472 153248 2 81 14013595 20275200 1 130560 0 52194197 99.953 5666722 33757 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 09:44:22] CVMFS is ok
[2025-11-24 09:44:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:44:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:44:22] Further information can be found at the LHC@home message board.
[2025-11-24 09:44:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:44:22] Checking for apptainer binary...
[2025-11-24 09:44:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:44:22] Running /usr/bin/apptainer --version
[2025-11-24 09:44:22] apptainer version 1.3.2-1.el7
[2025-11-24 09:44:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:44:23] c-115-6.aglt2.org
[2025-11-24 09:44:23] apptainer works
[2025-11-24 09:44:24] Set ATHENA_PROC_NUMBER=8
[2025-11-24 09:44:24] Set ATHENA_CORE_NUMBER=8
[2025-11-24 09:44:24] Starting ATLAS job with PandaID=6895365199
[2025-11-24 09:44:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 20:52:53]  *** The last 200 lines of the pilot log: ***
[2025-11-24 20:52:53] 2025-11-25 01:52:12,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,353 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 20:52:53] 2025-11-25 01:52:13,356 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-24 20:52:53] 2025-11-25 01:52:13,358 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895365199/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,359 | INFO     | extracted standard info from prmon json
[2025-11-24 20:52:53] 2025-11-25 01:52:13,359 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 20:52:53] 2025-11-25 01:52:13,359 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 20:52:53] 2025-11-25 01:52:13,372 | INFO     | fitting pss+swap vs Time
[2025-11-24 20:52:53] 2025-11-25 01:52:13,373 | INFO     | sum of square deviations: 87536637453.46175
[2025-11-24 20:52:53] 2025-11-25 01:52:13,381 | INFO     | sum of deviations: 606912461740.719
[2025-11-24 20:52:53] 2025-11-25 01:52:13,381 | INFO     | mean x: 1764015491.132622
[2025-11-24 20:52:53] 2025-11-25 01:52:13,382 | INFO     | mean y: 3246820.6814024393
[2025-11-24 20:52:53] 2025-11-25 01:52:13,382 | INFO     | intersect: -12227094844.444149
[2025-11-24 20:52:53] 2025-11-25 01:52:13,382 | INFO     | chi2: 6.185475582740234
[2025-11-24 20:52:53] 2025-11-25 01:52:13,383 | INFO     | sum of square deviations: 85550382596.44597
[2025-11-24 20:52:53] 2025-11-25 01:52:13,392 | INFO     | sum of deviations: 844922504387.329
[2025-11-24 20:52:53] 2025-11-25 01:52:13,392 | INFO     | mean x: 1764015338.6374807
[2025-11-24 20:52:53] 2025-11-25 01:52:13,392 | INFO     | mean y: 3265088.2980030724
[2025-11-24 20:52:53] 2025-11-25 01:52:13,392 | INFO     | intersect: -17418705596.85894
[2025-11-24 20:52:53] 2025-11-25 01:52:13,393 | INFO     | chi2: 3.226656322379663
[2025-11-24 20:52:53] 2025-11-25 01:52:13,393 | INFO     | current chi2=3.226656322379663 (change=47.83495174755473 %)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,394 | INFO     | sum of square deviations: 83594407376.89786
[2025-11-24 20:52:53] 2025-11-25 01:52:13,402 | INFO     | sum of deviations: 939445771473.1315
[2025-11-24 20:52:53] 2025-11-25 01:52:13,403 | INFO     | mean x: 1764015186.1424148
[2025-11-24 20:52:53] 2025-11-25 01:52:13,403 | INFO     | mean y: 3272446.955108359
[2025-11-24 20:52:53] 2025-11-25 01:52:13,403 | INFO     | intersect: -19820979670.344585
[2025-11-24 20:52:53] 2025-11-25 01:52:13,404 | INFO     | chi2: 2.6311658546275454
[2025-11-24 20:52:53] 2025-11-25 01:52:13,404 | INFO     | current chi2=2.6311658546275454 (change=18.455342256994474 %)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,404 | INFO     | right removable region: 645
[2025-11-24 20:52:53] 2025-11-25 01:52:13,405 | INFO     | sum of square deviations: 85550129446.44606
[2025-11-24 20:52:53] 2025-11-25 01:52:13,413 | INFO     | sum of deviations: 398394947644.9723
[2025-11-24 20:52:53] 2025-11-25 01:52:13,414 | INFO     | mean x: 1764015643.6374807
[2025-11-24 20:52:53] 2025-11-25 01:52:13,414 | INFO     | mean y: 3262797.7880184334
[2025-11-24 20:52:53] 2025-11-25 01:52:13,414 | INFO     | intersect: -8211510511.605976
[2025-11-24 20:52:53] 2025-11-25 01:52:13,414 | INFO     | chi2: 3.7568407098284258
[2025-11-24 20:52:53] 2025-11-25 01:52:13,415 | INFO     | current chi2=3.7568407098284258 (change=39.26351079112815 %)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,415 | INFO     | sum of square deviations: 83593940910.18114
[2025-11-24 20:52:53] 2025-11-25 01:52:13,425 | INFO     | sum of deviations: 362566898199.6431
[2025-11-24 20:52:53] 2025-11-25 01:52:13,425 | INFO     | mean x: 1764015796.1408668
[2025-11-24 20:52:53] 2025-11-25 01:52:13,425 | INFO     | mean y: 3265588.3885448915
[2025-11-24 20:52:53] 2025-11-25 01:52:13,425 | INFO     | intersect: -7647692466.922766
[2025-11-24 20:52:53] 2025-11-25 01:52:13,426 | INFO     | chi2: 3.7260398198515547
[2025-11-24 20:52:53] 2025-11-25 01:52:13,426 | INFO     | current chi2=3.7260398198515547 (change=0.8198614835143675 %)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,426 | INFO     | left removable region: 20
[2025-11-24 20:52:53] 2025-11-25 01:52:13,427 | INFO     | sum of square deviations: 75703859942.72626
[2025-11-24 20:52:53] 2025-11-25 01:52:13,434 | INFO     | sum of deviations: 663104649356.6317
[2025-11-24 20:52:53] 2025-11-25 01:52:13,434 | INFO     | mean x: 1764015765.6576
[2025-11-24 20:52:53] 2025-11-25 01:52:13,435 | INFO     | mean y: 3296247.288
[2025-11-24 20:52:53] 2025-11-25 01:52:13,435 | INFO     | intersect: -15448056651.109913
[2025-11-24 20:52:53] 2025-11-25 01:52:13,435 | INFO     | chi2: 0.09178092155191843
[2025-11-24 20:52:53] 2025-11-25 01:52:13,436 | INFO     | current memory leak: 8.76 B/s (using 625 data points, chi2=0.09)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,436 | INFO     | could have reported an average CPU frequency of 2398 MHz (25 samples)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | ..............................
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . Timing measurements:
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . get job = 0 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . initial setup = 2 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . payload setup = 9 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . stage-in = 0 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . payload execution = 40010 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,437 | INFO     | . stage-out = 3 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,438 | INFO     | . log creation = 0 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,438 | INFO     | ..............................
[2025-11-24 20:52:53] 2025-11-25 01:52:13,669 | INFO     | time since job start (40052s) is within the limit (172800.0s)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,669 | INFO     | 40054s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 20:52:53] 2025-11-25 01:52:13,891 | INFO     | 
[2025-11-24 20:52:53] 2025-11-25 01:52:13,892 | INFO     | job summary report
[2025-11-24 20:52:53] 2025-11-25 01:52:13,892 | INFO     | --------------------------------------------------
[2025-11-24 20:52:53] 2025-11-25 01:52:13,892 | INFO     | PanDA job id: 6895365199
[2025-11-24 20:52:53] 2025-11-25 01:52:13,892 | INFO     | task id: 47556137
[2025-11-24 20:52:53] 2025-11-25 01:52:13,892 | INFO     | errors: (none)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,893 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 20:52:53] 2025-11-25 01:52:13,893 | INFO     | pilot state: finished 
[2025-11-24 20:52:53] 2025-11-25 01:52:13,893 | INFO     | transexitcode: 0
[2025-11-24 20:52:53] 2025-11-25 01:52:13,893 | INFO     | exeerrorcode: 0
[2025-11-24 20:52:53] 2025-11-25 01:52:13,893 | INFO     | exeerrordiag: 
[2025-11-24 20:52:53] 2025-11-25 01:52:13,894 | INFO     | exitcode: 0
[2025-11-24 20:52:53] 2025-11-25 01:52:13,894 | INFO     | exitmsg: OK
[2025-11-24 20:52:53] 2025-11-25 01:52:13,894 | INFO     | cpuconsumptiontime: 310171 s
[2025-11-24 20:52:53] 2025-11-25 01:52:13,894 | INFO     | nevents: 1000
[2025-11-24 20:52:53] 2025-11-25 01:52:13,894 | INFO     | neventsw: 0
[2025-11-24 20:52:53] 2025-11-25 01:52:13,894 | INFO     | pid: 9065
[2025-11-24 20:52:53] 2025-11-25 01:52:13,895 | INFO     | pgrp: 9065
[2025-11-24 20:52:53] 2025-11-25 01:52:13,895 | INFO     | corecount: 8
[2025-11-24 20:52:53] 2025-11-25 01:52:13,895 | INFO     | event service: False
[2025-11-24 20:52:53] 2025-11-25 01:52:13,895 | INFO     | sizes: {0: 2284310, 6: 2284572, 11: 2284600, 40022: 2328133, 40023: 2328132, 40028: 2337182, 40029: 2337366, 40035: 2337676}
[2025-11-24 20:52:53] 2025-11-25 01:52:13,895 | INFO     | --------------------------------------------------
[2025-11-24 20:52:53] 2025-11-25 01:52:13,895 | INFO     | 
[2025-11-24 20:52:53] 2025-11-25 01:52:13,896 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 20:52:53] 2025-11-25 01:52:13,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 20:52:53] 2025-11-25 01:52:13,927 | INFO     | job 6895365199 has completed (purged errors)
[2025-11-24 20:52:53] 2025-11-25 01:52:13,928 | INFO     | overall cleanup function is called
[2025-11-24 20:52:53] 2025-11-25 01:52:14,942 | INFO     | --- collectZombieJob: --- 10, [9065]
[2025-11-24 20:52:53] 2025-11-25 01:52:14,942 | INFO     | zombie collector waiting for pid 9065
[2025-11-24 20:52:53] 2025-11-25 01:52:14,943 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 20:52:53] 2025-11-25 01:52:14,943 | INFO     | collected zombie processes
[2025-11-24 20:52:53] 2025-11-25 01:52:14,943 | INFO     | will attempt to kill all subprocesses of pid=9065
[2025-11-24 20:52:53] 2025-11-25 01:52:15,028 | INFO     | process IDs to be killed: [9065] (in reverse order)
[2025-11-24 20:52:53] 2025-11-25 01:52:15,091 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 20:52:53] 2025-11-25 01:52:15,092 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 20:52:53] 2025-11-25 01:52:15,097 | INFO     | did not find any defunct processes belonging to 9065
[2025-11-24 20:52:53] 2025-11-25 01:52:15,101 | INFO     | did not find any defunct processes belonging to 9065
[2025-11-24 20:52:53] 2025-11-25 01:52:15,103 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 20:52:53] 2025-11-25 01:52:15,104 | INFO     | ready for new job
[2025-11-24 20:52:53] 2025-11-25 01:52:15,104 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 20:52:53] 2025-11-25 01:52:15,107 | INFO     | ***************************************
[2025-11-24 20:52:53] 2025-11-25 01:52:15,107 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 20:52:53] 2025-11-25 01:52:15,107 | INFO     | ***************************************
[2025-11-24 20:52:53] 2025-11-25 01:52:15,107 | INFO     | 
[2025-11-24 20:52:53] 2025-11-25 01:52:15,108 | INFO     | architecture information:
[2025-11-24 20:52:53] 2025-11-25 01:52:15,109 | INFO     | executing command: cat /etc/os-release
[2025-11-24 20:52:53] 2025-11-25 01:52:15,127 | INFO     | cat /etc/os-release:
[2025-11-24 20:52:53] NAME="CentOS Linux"
[2025-11-24 20:52:53] VERSION="7 (Core)"
[2025-11-24 20:52:53] ID="centos"
[2025-11-24 20:52:53] ID_LIKE="rhel fedora"
[2025-11-24 20:52:53] VERSION_ID="7"
[2025-11-24 20:52:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 20:52:53] ANSI_COLOR="0;31"
[2025-11-24 20:52:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 20:52:53] HOME_URL="https://www.centos.org/"
[2025-11-24 20:52:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 20:52:53] 
[2025-11-24 20:52:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 20:52:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 20:52:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 20:52:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 20:52:53] 
[2025-11-24 20:52:53] 2025-11-25 01:52:15,128 | INFO     | ***************************************
[2025-11-24 20:52:53] 2025-11-25 01:52:15,631 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 20:52:53] 2025-11-25 01:52:15,652 | INFO     | sufficient remaining disk space (17471373312 B)
[2025-11-24 20:52:53] 2025-11-25 01:52:15,652 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 20:52:53] 2025-11-25 01:52:15,652 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 20:52:53] 2025-11-25 01:52:15,653 | INFO     | update_server=False
[2025-11-24 20:52:53] 2025-11-25 01:52:15,653 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 20:52:53] 2025-11-25 01:52:15,653 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-24 20:52:53] 2025-11-25 01:52:15,654 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 20:52:53] 2025-11-25 01:52:15,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 20:52:53] 2025-11-25 01:52:15,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 20:52:53] 2025-11-25 01:52:16,213 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:52:53] 2025-11-25 01:52:16,214 | INFO     | aborting loop
[2025-11-24 20:52:53] 2025-11-25 01:52:16,449 | INFO     | all data control threads have been joined
[2025-11-24 20:52:53] 2025-11-25 01:52:16,541 | INFO     | all job control threads have been joined
[2025-11-24 20:52:53] 2025-11-25 01:52:16,654 | INFO     | [job] retrieve thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:16,751 | INFO     | all payload control threads have been joined
[2025-11-24 20:52:53] 2025-11-25 01:52:16,906 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 20:52:53] 2025-11-25 01:52:16,991 | INFO     | [payload] validate_post thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,125 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,219 | INFO     | [job] job monitor thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,247 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,455 | INFO     | [data] control thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,544 | INFO     | [job] control thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,721 | INFO     | [payload] failed_post thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,751 | INFO     | [data] copytool_in thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,756 | INFO     | [job] validate thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,757 | INFO     | [payload] control thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:17,987 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:18,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 20:52:53] 2025-11-25 01:52:18,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 20:52:53] 2025-11-25 01:52:18,912 | INFO     | [data] copytool_out thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:19,543 | INFO     | [job] queue monitor thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:22,226 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:26,243 | INFO     | job.realtimelogging is not enabled
[2025-11-24 20:52:53] 2025-11-25 01:52:27,248 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 20:52:53] 2025-11-25 01:52:47,133 | INFO     | [monitor] cgroup control has ended
[2025-11-24 20:52:53] 2025-11-25 01:52:48,139 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545052215104)>', '<ExcThread(monitor, started 140543870887680)>']
[2025-11-24 20:52:53] 2025-11-25 01:52:48,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 20:52:53] 2025-11-25 01:52:48,823 | INFO     | [monitor] control thread has ended
[2025-11-24 20:52:53] 2025-11-25 01:52:53,149 | INFO     | all workflow threads have been joined
[2025-11-24 20:52:53] 2025-11-25 01:52:53,150 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 20:52:53] 2025-11-25 01:52:53,150 | INFO     | traces error code: 0
[2025-11-24 20:52:53] 2025-11-25 01:52:53,151 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 20:52:53] 2025-11-25 01:52:53,253 [wrapper] ==== pilot stdout END ====
[2025-11-24 20:52:53] 2025-11-25 01:52:53,258 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 20:52:53] 2025-11-25 01:52:53,262 [wrapper] pilotpid: 2377
[2025-11-24 20:52:53] 2025-11-25 01:52:53,266 [wrapper] Pilot exit status: 0
[2025-11-24 20:52:53] 2025-11-25 01:52:53,283 [wrapper] pandaids: 6895365199
[2025-11-24 20:52:53] 2025-11-25 01:52:53,326 [wrapper] cleanup supervisor_pilot 17347 2378
[2025-11-24 20:52:53] 2025-11-25 01:52:53,330 [wrapper] Test setup, not cleaning
[2025-11-24 20:52:53] 2025-11-25 01:52:53,335 [wrapper] apfmon messages muted
[2025-11-24 20:52:53] 2025-11-25 01:52:53,340 [wrapper] ==== wrapper stdout END ====
[2025-11-24 20:52:53] 2025-11-25 01:52:53,344 [wrapper] ==== wrapper stderr END ====
[2025-11-24 20:52:53]  *** Error codes and diagnostics ***
[2025-11-24 20:52:53]     "exeErrorCode": 0,
[2025-11-24 20:52:53]     "exeErrorDiag": "",
[2025-11-24 20:52:53]     "pilotErrorCode": 0,
[2025-11-24 20:52:53]     "pilotErrorDiag": "",
[2025-11-24 20:52:53]  *** Listing of results directory ***
[2025-11-24 20:52:53] total 1312004
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 11:55 pilot3.tar.gz
[2025-11-24 20:52:53] -rwx------ 1 boincer umatlas     36292 Nov 23 12:04 runpilot2-wrapper.sh
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:04 queuedata.json
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas       100 Nov 24 09:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 20:52:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 09:44 run_atlas
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas       105 Nov 24 09:44 job.xml
[2025-11-24 20:52:53] -rw-r--r-- 2 boincer umatlas 409236393 Nov 24 09:44 EVNT.47483658._000818.pool.root.1
[2025-11-24 20:52:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:44 start_atlas.sh
[2025-11-24 20:52:53] drwxrwx--x 2 boincer umatlas      4096 Nov 24 09:44 shared
[2025-11-24 20:52:53] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 09:44 input.tar.gz
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas         0 Nov 24 09:44 boinc_lockfile
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 09:44 pandaJob.out
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas        57 Nov 24 09:44 setup.sh.local
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas    988283 Nov 24 09:44 agis_schedconf.cvmfs.json
[2025-11-24 20:52:53] drwx------ 5 boincer umatlas      4096 Nov 24 09:44 pilot3
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas       533 Nov 24 20:38 boinc_task_state.xml
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas      5911 Nov 24 20:45 init_data.xml
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas 915486512 Nov 24 20:51 HITS.47556137._008045.pool.root.1
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas      1061 Nov 24 20:51 memory_monitor_summary.json
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas   1516227 Nov 24 20:52 agis_ddmendpoints.agis.ALL.json
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas   1911670 Nov 24 20:52 log.47556137._008045.job.log.tgz.1
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas        95 Nov 24 20:52 pilot_heartbeat.json
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas      8669 Nov 24 20:52 heartbeat.json
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas        29 Nov 24 20:52 wrapper_checkpoint.txt
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 20:52 boinc_mmap_file
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas      4624 Nov 24 20:52 pilotlog.txt
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas   5514014 Nov 24 20:52 log.47556137._008045.job.log.1
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas       353 Nov 24 20:52 output.list
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas       620 Nov 24 20:52 runtime_log
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas   7444480 Nov 24 20:52 result.tar.gz
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas       667 Nov 24 20:52 x8KLDmbgSh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmheIKDmGx0Qjn.diag
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas      9338 Nov 24 20:52 runtime_log.err
[2025-11-24 20:52:53] -rw-r--r-- 1 boincer umatlas     21210 Nov 24 20:52 stderr.txt
[2025-11-24 20:52:53] HITS file was successfully produced:
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas 915486512 Nov 24 20:51 shared/HITS.pool.root.1
[2025-11-24 20:52:53]  *** Contents of shared directory: ***
[2025-11-24 20:52:53] total 1301552
[2025-11-24 20:52:53] -rw-r--r-- 2 boincer umatlas 409236393 Nov 24 09:44 ATLAS.root_0
[2025-11-24 20:52:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:44 start_atlas.sh
[2025-11-24 20:52:53] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 09:44 input.tar.gz
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas 915486512 Nov 24 20:51 HITS.pool.root.1
[2025-11-24 20:52:53] -rw------- 1 boincer umatlas   7444480 Nov 24 20:52 result.tar.gz
20:52:54 (31072): run_atlas exited; CPU time 308210.372643
20:52:54 (31072): called boinc_finish(0)

</stderr_txt>
]]>

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