Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:55:59 (906968): wrapper (7.7.26015): starting
07:55:59 (906968): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 07:55:59] Arguments: --nthreads 4
[2025-11-24 07:55:59] Threads: 4
[2025-11-24 07:55:59] Checking for CVMFS
[2025-11-24 07:56:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:56:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:56:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:56:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:56:04] 2.13.3.0 907179 0 29816 153247 3 1 3898528 4096000 0 130560 0 0 0.000 1292 1014 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-24 07:56:04] CVMFS is ok
[2025-11-24 07:56:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:56:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-24 07:56:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-24 07:56:04] Further information can be found at the LHC@home message board.
[2025-11-24 07:56:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:56:04] Checking for apptainer binary...
[2025-11-24 07:56:04] apptainer is not installed, using version from CVMFS
[2025-11-24 07:56:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:56:04] tower
[2025-11-24 07:56:04] apptainer works
[2025-11-24 07:56:04] Set ATHENA_PROC_NUMBER=4
[2025-11-24 07:56:04] Set ATHENA_CORE_NUMBER=4
[2025-11-24 07:56:04] Starting ATLAS job with PandaID=6894053126
[2025-11-24 07:56:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 10:39:05]  *** The last 200 lines of the pilot log: ***
[2025-11-24 10:39:05] 2025-11-24 16:38:27,314 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:39:05] 2025-11-24 16:38:28,406 | INFO     | time since job start (9724s) is within the limit (172800.0s)
[2025-11-24 10:39:05] 2025-11-24 16:38:29,817 | INFO     | monitor loop #744: job 0:6894053126 is in state 'finished'
[2025-11-24 10:39:05] 2025-11-24 16:38:29,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:39:05] 2025-11-24 16:38:30,410 | INFO     | time since job start (9726s) is within the limit (172800.0s)
[2025-11-24 10:39:05] 2025-11-24 16:38:32,318 | INFO     | monitor loop #745: job 0:6894053126 is in state 'finished'
[2025-11-24 10:39:05] 2025-11-24 16:38:32,318 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 10:39:05] 2025-11-24 16:38:32,414 | INFO     | time since job start (9728s) is within the limit (172800.0s)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,025 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 10:39:05] 2025-11-24 16:38:34,026 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3390.9495
[2025-11-24 10:39:05] 2025-11-24 16:38:34,027 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6894053126/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,027 | INFO     | extracted standard info from prmon json
[2025-11-24 10:39:05] 2025-11-24 16:38:34,027 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 10:39:05] 2025-11-24 16:38:34,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 10:39:05] 2025-11-24 16:38:34,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 10:39:05] 2025-11-24 16:38:34,028 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 10:39:05] 2025-11-24 16:38:34,029 | INFO     | fitting pss+swap vs Time
[2025-11-24 10:39:05] 2025-11-24 16:38:34,029 | INFO     | sum of square deviations: 1246386160.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,029 | INFO     | sum of deviations: 18510985397.000004
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | mean x: 1763997431.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | mean y: 2406634.748427673
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | intersect: -26195999391.828857
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | chi2: 2.4649075572099934
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | sum of square deviations: 1132458442.5
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | sum of deviations: 18051204911.999992
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | mean x: 1763997278.5
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | mean y: 2406019.116883117
[2025-11-24 10:39:05] 2025-11-24 16:38:34,030 | INFO     | intersect: -28115426073.79351
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | chi2: 2.46890431122052
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | current chi2=2.46890431122052 (change=-0.16214620296147084 %)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | right removable region: 153
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | sum of square deviations: 1132458442.5
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | sum of deviations: -14920860866.5
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | mean x: 1763997583.5
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | mean y: 2450979.590909091
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | intersect: 23244242046.23812
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | chi2: 0.18691455226501721
[2025-11-24 10:39:05] 2025-11-24 16:38:34,031 | INFO     | current chi2=0.18691455226501721 (change=92.41697516329643 %)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | sum of square deviations: 1025693650.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | sum of deviations: -12963573416.999998
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | mean x: 1763997736.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | mean y: 2448097.2818791945
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | intersect: 22297325479.09835
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | chi2: 0.1703085200882683
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | current chi2=0.1703085200882683 (change=8.884290696212895 %)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | left removable region: 20
[2025-11-24 10:39:05] 2025-11-24 16:38:34,032 | INFO     | sum of square deviations: 729472282.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | sum of deviations: 1289187298.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | mean x: 1763997858.0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | mean y: 2425704.5639097746
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | intersect: -3115065786.679355
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | chi2: 0.001870384108710975
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | current memory leak: 1.77 B/s (using 133 data points, chi2=0.00)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | could have reported an average CPU frequency of 3319 MHz (9 samples)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | ..............................
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . Timing measurements:
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . get job = 0 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . initial setup = 3 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . payload setup = 11 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . stage-in = 0 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . payload execution = 9687 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . stage-out = 0 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,033 | INFO     | . log creation = 0 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,034 | INFO     | ..............................
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | 
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | job summary report
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | --------------------------------------------------
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | PanDA job id: 6894053126
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | task id: 47523618
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | errors: (none)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 10:39:05] 2025-11-24 16:38:34,072 | INFO     | pilot state: finished 
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | transexitcode: 0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | exeerrorcode: 0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | exeerrordiag: 
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | exitcode: 0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | exitmsg: OK
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | cpuconsumptiontime: 36495 s
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | nevents: 400
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | neventsw: 0
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | pid: 917604
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | pgrp: 917604
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | corecount: 4
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | event service: False
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | sizes: {0: 2283948, 3: 2284210, 11: 2284238, 9702: 2312724, 9703: 2321736, 9705: 2321792, 9717: 2322178}
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | --------------------------------------------------
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | 
[2025-11-24 10:39:05] 2025-11-24 16:38:34,073 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-24 10:39:05] 2025-11-24 16:38:34,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 10:39:05] 2025-11-24 16:38:34,084 | INFO     | job 6894053126 has completed (purged errors)
[2025-11-24 10:39:05] 2025-11-24 16:38:34,084 | INFO     | overall cleanup function is called
[2025-11-24 10:39:05] 2025-11-24 16:38:35,086 | INFO     | --- collectZombieJob: --- 10, [917604]
[2025-11-24 10:39:05] 2025-11-24 16:38:35,087 | INFO     | zombie collector waiting for pid 917604
[2025-11-24 10:39:05] 2025-11-24 16:38:35,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 10:39:05] 2025-11-24 16:38:35,087 | INFO     | collected zombie processes
[2025-11-24 10:39:05] 2025-11-24 16:38:35,087 | INFO     | will attempt to kill all subprocesses of pid=917604
[2025-11-24 10:39:05] 2025-11-24 16:38:35,120 | INFO     | process IDs to be killed: [917604] (in reverse order)
[2025-11-24 10:39:05] 2025-11-24 16:38:35,139 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 10:39:05] 2025-11-24 16:38:35,139 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 10:39:05] 2025-11-24 16:38:35,140 | INFO     | did not find any defunct processes belonging to 917604
[2025-11-24 10:39:05] 2025-11-24 16:38:35,141 | INFO     | did not find any defunct processes belonging to 917604
[2025-11-24 10:39:05] 2025-11-24 16:38:35,141 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 10:39:05] 2025-11-24 16:38:35,141 | INFO     | ready for new job
[2025-11-24 10:39:05] 2025-11-24 16:38:35,141 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 10:39:05] 2025-11-24 16:38:35,142 | INFO     | ***************************************
[2025-11-24 10:39:05] 2025-11-24 16:38:35,143 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 10:39:05] 2025-11-24 16:38:35,143 | INFO     | ***************************************
[2025-11-24 10:39:05] 2025-11-24 16:38:35,143 | INFO     | 
[2025-11-24 10:39:05] 2025-11-24 16:38:35,143 | INFO     | architecture information:
[2025-11-24 10:39:05] 2025-11-24 16:38:35,143 | INFO     | executing command: cat /etc/os-release
[2025-11-24 10:39:05] 2025-11-24 16:38:35,149 | INFO     | cat /etc/os-release:
[2025-11-24 10:39:05] NAME="CentOS Linux"
[2025-11-24 10:39:05] VERSION="7 (Core)"
[2025-11-24 10:39:05] ID="centos"
[2025-11-24 10:39:05] ID_LIKE="rhel fedora"
[2025-11-24 10:39:05] VERSION_ID="7"
[2025-11-24 10:39:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 10:39:05] ANSI_COLOR="0;31"
[2025-11-24 10:39:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 10:39:05] HOME_URL="https://www.centos.org/"
[2025-11-24 10:39:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 10:39:05] 
[2025-11-24 10:39:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 10:39:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 10:39:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 10:39:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 10:39:05] 
[2025-11-24 10:39:05] 2025-11-24 16:38:35,149 | INFO     | ***************************************
[2025-11-24 10:39:05] 2025-11-24 16:38:35,653 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-24 10:39:05] 2025-11-24 16:38:35,668 | INFO     | sufficient remaining disk space (74743545856 B)
[2025-11-24 10:39:05] 2025-11-24 16:38:35,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 10:39:05] 2025-11-24 16:38:35,669 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 10:39:05] 2025-11-24 16:38:35,669 | INFO     | update_server=False
[2025-11-24 10:39:05] 2025-11-24 16:38:35,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 10:39:05] 2025-11-24 16:38:35,669 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:39:05] 2025-11-24 16:38:35,670 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 10:39:05] 2025-11-24 16:38:35,812 | INFO     | all job control threads have been joined
[2025-11-24 10:39:05] 2025-11-24 16:38:35,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 10:39:05] 2025-11-24 16:38:35,823 | INFO     | aborting loop
[2025-11-24 10:39:05] 2025-11-24 16:38:36,523 | INFO     | all data control threads have been joined
[2025-11-24 10:39:05] 2025-11-24 16:38:36,675 | INFO     | [job] retrieve thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:36,675 | INFO     | all payload control threads have been joined
[2025-11-24 10:39:05] 2025-11-24 16:38:36,676 | INFO     | [job] queue monitor thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:36,682 | INFO     | [payload] validate_post thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:36,792 | INFO     | [payload] failed_post thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:36,817 | INFO     | [job] control thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:36,828 | INFO     | [job] job monitor thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,138 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 10:39:05] 2025-11-24 16:38:37,528 | INFO     | [data] control thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,627 | INFO     | [data] copytool_in thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,676 | INFO     | [data] copytool_out thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,681 | INFO     | [payload] control thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,770 | INFO     | [job] validate thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,858 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:37,963 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:39,759 | INFO     | [monitor] cgroup control has ended
[2025-11-24 10:39:05] 2025-11-24 16:38:41,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:45,942 | INFO     | job.realtimelogging is not enabled
[2025-11-24 10:39:05] 2025-11-24 16:38:46,948 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 10:39:05] 2025-11-24 16:38:47,096 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140435153086272)>', '<ExcThread(monitor, started 140434617657088)>']
[2025-11-24 10:39:05] 2025-11-24 16:38:52,122 | INFO     | all workflow threads have been joined
[2025-11-24 10:39:05] 2025-11-24 16:38:52,122 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 10:39:05] 2025-11-24 16:38:52,123 | INFO     | traces error code: 0
[2025-11-24 10:39:05] 2025-11-24 16:38:52,123 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 10:39:05] 2025-11-24 16:39:05,493 | INFO     | PID=911222 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 10:39:05] 2025-11-24 16:39:05,494 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 10:39:05] 2025-11-24 16:39:05,494 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 10:39:05] 2025-11-24 16:39:05,494 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 10:39:05] 2025-11-24 16:39:05,494 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 10:39:05] 2025-11-24 16:39:05,494 | INFO     | [monitor] control thread has ended
[2025-11-24 10:39:05] 2025-11-24 16:39:05,550 [wrapper] ==== pilot stdout END ====
[2025-11-24 10:39:05] 2025-11-24 16:39:05,552 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 10:39:05] 2025-11-24 16:39:05,554 [wrapper] pilotpid: 911222
[2025-11-24 10:39:05] 2025-11-24 16:39:05,555 [wrapper] Pilot exit status: 0
[2025-11-24 10:39:05] 2025-11-24 16:39:05,560 [wrapper] pandaids: 6894053126
[2025-11-24 10:39:05] 2025-11-24 16:39:05,571 [wrapper] cleanup supervisor_pilot  934080 911223
[2025-11-24 10:39:05] 2025-11-24 16:39:05,573 [wrapper] Test setup, not cleaning
[2025-11-24 10:39:05] 2025-11-24 16:39:05,575 [wrapper] apfmon messages muted
[2025-11-24 10:39:05] 2025-11-24 16:39:05,576 [wrapper] ==== wrapper stdout END ====
[2025-11-24 10:39:05] 2025-11-24 16:39:05,577 [wrapper] ==== wrapper stderr END ====
[2025-11-24 10:39:05]  *** Error codes and diagnostics ***
[2025-11-24 10:39:05]     "exeErrorCode": 0,
[2025-11-24 10:39:05]     "exeErrorDiag": "",
[2025-11-24 10:39:05]     "pilotErrorCode": 0,
[2025-11-24 10:39:05]     "pilotErrorDiag": "",
[2025-11-24 10:39:05]  *** Listing of results directory ***
[2025-11-24 10:39:05] total 594200
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc    576529 Nov 23 11:39 pilot3.tar.gz
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc      5112 Nov 23 11:42 queuedata.json
[2025-11-24 10:39:05] -rwx------ 1 boinc boinc     36292 Nov 23 11:43 runpilot2-wrapper.sh
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc       100 Nov 24 07:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 10:39:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 07:55 run_atlas
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc       105 Nov 24 07:55 job.xml
[2025-11-24 10:39:05] -rw-r--r-- 2 boinc boinc     15847 Nov 24 07:55 start_atlas.sh
[2025-11-24 10:39:05] drwxrwx--x 2 boinc boinc      4096 Nov 24 07:55 shared
[2025-11-24 10:39:05] -rw-r--r-- 2 boinc boinc    589949 Nov 24 07:55 input.tar.gz
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc      6737 Nov 24 07:55 init_data.xml
[2025-11-24 10:39:05] -rw-r--r-- 2 boinc boinc 306398582 Nov 24 07:55 EVNT.47523616._000003.pool.root.1
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc         0 Nov 24 07:55 boinc_lockfile
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc      2611 Nov 24 07:56 pandaJob.out
[2025-11-24 10:39:05] -rw------- 1 boinc boinc    988280 Nov 24 07:56 agis_schedconf.cvmfs.json
[2025-11-24 10:39:05] -rw------- 1 boinc boinc   1516227 Nov 24 07:56 agis_ddmendpoints.agis.ALL.json
[2025-11-24 10:39:05] drwx------ 5 boinc boinc      4096 Nov 24 07:56 pilot3
[2025-11-24 10:39:05] -rw------- 1 boinc boinc 294680003 Nov 24 10:37 HITS.47523618._000072.pool.root.1
[2025-11-24 10:39:05] -rw------- 1 boinc boinc      1019 Nov 24 10:38 memory_monitor_summary.json
[2025-11-24 10:39:05] -rw------- 1 boinc boinc        95 Nov 24 10:38 pilot_heartbeat.json
[2025-11-24 10:39:05] -rw------- 1 boinc boinc    347384 Nov 24 10:38 log.47523618._000072.job.log.tgz.1
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc       529 Nov 24 10:38 boinc_task_state.xml
[2025-11-24 10:39:05] -rw------- 1 boinc boinc      7737 Nov 24 10:38 heartbeat.json
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc      8192 Nov 24 10:39 boinc_mmap_file
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc        27 Nov 24 10:39 wrapper_checkpoint.txt
[2025-11-24 10:39:05] -rw------- 1 boinc boinc       746 Nov 24 10:39 pilotlog.txt
[2025-11-24 10:39:05] -rw------- 1 boinc boinc   1391581 Nov 24 10:39 log.47523618._000072.job.log.1
[2025-11-24 10:39:05] -rw------- 1 boinc boinc       357 Nov 24 10:39 output.list
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc       620 Nov 24 10:39 runtime_log
[2025-11-24 10:39:05] -rw------- 1 boinc boinc   1761280 Nov 24 10:39 result.tar.gz
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc      8864 Nov 24 10:39 runtime_log.err
[2025-11-24 10:39:05] -rw------- 1 boinc boinc       638 Nov 24 10:39 C22LDmuITh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmU4KKDmCKWmgn.diag
[2025-11-24 10:39:05] -rw-r--r-- 1 boinc boinc     21483 Nov 24 10:39 stderr.txt
[2025-11-24 10:39:05] HITS file was successfully produced:
[2025-11-24 10:39:05] -rw------- 1 boinc boinc 294680003 Nov 24 10:37 shared/HITS.pool.root.1
[2025-11-24 10:39:05]  *** Contents of shared directory: ***
[2025-11-24 10:39:05] total 589316
[2025-11-24 10:39:05] -rw-r--r-- 2 boinc boinc     15847 Nov 24 07:55 start_atlas.sh
[2025-11-24 10:39:05] -rw-r--r-- 2 boinc boinc    589949 Nov 24 07:55 input.tar.gz
[2025-11-24 10:39:05] -rw-r--r-- 2 boinc boinc 306398582 Nov 24 07:55 ATLAS.root_0
[2025-11-24 10:39:05] -rw------- 1 boinc boinc 294680003 Nov 24 10:37 HITS.pool.root.1
[2025-11-24 10:39:05] -rw------- 1 boinc boinc   1761280 Nov 24 10:39 result.tar.gz
10:39:07 (906968): run_atlas exited; CPU time 36546.480766
10:39:07 (906968): called boinc_finish(0)

</stderr_txt>
]]>

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