Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:21:33 (6215): wrapper (7.7.26015): starting
03:21:33 (6215): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 03:21:33] Arguments: --nthreads 8
[2025-11-27 03:21:33] Threads: 8
[2025-11-27 03:21:33] Checking for CVMFS
[2025-11-27 03:21:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:21:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:21:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:21:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:21:36] 2.11.2.0 3755 286238 141376 153343 2 75 19858838 25165824 1338 130560 10 140437319 99.894 72930474 3051 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 03:21:36] CVMFS is ok
[2025-11-27 03:21:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:21:36] Checking for apptainer binary...
[2025-11-27 03:21:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:21:36] Running /usr/bin/apptainer --version
[2025-11-27 03:21:36] apptainer version 1.3.2-1.el7
[2025-11-27 03:21:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:21:45] cg-vwn224.simple-grid.lan
[2025-11-27 03:21:45] apptainer works
[2025-11-27 03:21:45] Set ATHENA_PROC_NUMBER=8
[2025-11-27 03:21:45] Set ATHENA_CORE_NUMBER=8
[2025-11-27 03:21:45] Starting ATLAS job with PandaID=6895365662
[2025-11-27 03:21:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 02:50:09]  *** The last 200 lines of the pilot log: ***
[2025-11-28 02:50:09] 2025-11-28 01:49:20,576 | INFO     | .. there are 9 such processes running
[2025-11-28 02:50:09] 2025-11-28 01:49:21,320 | INFO     | monitor loop #5670: job 0:6895365662 is in state 'finished'
[2025-11-28 02:50:09] 2025-11-28 01:49:21,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:50:09] 2025-11-28 01:49:21,580 | INFO     | time since job start (84229s) is within the limit (172800.0s)
[2025-11-28 02:50:09] 2025-11-28 01:49:23,586 | INFO     | time since job start (84231s) is within the limit (172800.0s)
[2025-11-28 02:50:09] 2025-11-28 01:49:23,824 | INFO     | monitor loop #5671: job 0:6895365662 is in state 'finished'
[2025-11-28 02:50:09] 2025-11-28 01:49:23,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:50:09] 2025-11-28 01:49:25,595 | INFO     | time since job start (84233s) is within the limit (172800.0s)
[2025-11-28 02:50:09] 2025-11-28 01:49:26,331 | INFO     | monitor loop #5672: job 0:6895365662 is in state 'finished'
[2025-11-28 02:50:09] 2025-11-28 01:49:26,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:50:09] 2025-11-28 01:49:27,602 | INFO     | time since job start (84235s) is within the limit (172800.0s)
[2025-11-28 02:50:09] 2025-11-28 01:49:28,836 | INFO     | monitor loop #5673: job 0:6895365662 is in state 'finished'
[2025-11-28 02:50:09] 2025-11-28 01:49:28,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:50:09] 2025-11-28 01:49:29,620 | INFO     | time since job start (84237s) is within the limit (172800.0s)
[2025-11-28 02:50:09] 2025-11-28 01:49:29,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 02:50:09] 2025-11-28 01:49:29,902 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 02:50:09] 2025-11-28 01:49:29,904 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6895365662/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 02:50:09] 2025-11-28 01:49:29,905 | INFO     | extracted standard info from prmon json
[2025-11-28 02:50:09] 2025-11-28 01:49:29,905 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 02:50:09] 2025-11-28 01:49:29,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 02:50:09] 2025-11-28 01:49:29,963 | INFO     | fitting pss+swap vs Time
[2025-11-28 02:50:09] 2025-11-28 01:49:29,966 | INFO     | sum of square deviations: 800828825581.8248
[2025-11-28 02:50:09] 2025-11-28 01:49:30,063 | INFO     | sum of deviations: 2616925764024.6196
[2025-11-28 02:50:09] 2025-11-28 01:49:30,063 | INFO     | mean x: 1764252627.548105
[2025-11-28 02:50:09] 2025-11-28 01:49:30,064 | INFO     | mean y: 2827832.528425656
[2025-11-28 02:50:09] 2025-11-28 01:49:30,064 | INFO     | intersect: -5762346956.134365
[2025-11-28 02:50:09] 2025-11-28 01:49:30,066 | INFO     | chi2: 23.58727350003932
[2025-11-28 02:50:09] 2025-11-28 01:49:30,068 | INFO     | sum of square deviations: 792105695951.312
[2025-11-28 02:50:09] 2025-11-28 01:49:30,128 | INFO     | sum of deviations: 3074121961197.003
[2025-11-28 02:50:09] 2025-11-28 01:49:30,128 | INFO     | mean x: 1764252475.0519385
[2025-11-28 02:50:09] 2025-11-28 01:49:30,128 | INFO     | mean y: 2835824.6620336506
[2025-11-28 02:50:09] 2025-11-28 01:49:30,129 | INFO     | intersect: -6844138394.024429
[2025-11-28 02:50:09] 2025-11-28 01:49:30,130 | INFO     | chi2: 20.280650136799327
[2025-11-28 02:50:09] 2025-11-28 01:49:30,130 | INFO     | current chi2=20.280650136799327 (change=14.018675635547623 %)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,130 | INFO     | right removable region: 1366
[2025-11-28 02:50:09] 2025-11-28 01:49:30,132 | INFO     | sum of square deviations: 792104818771.3121
[2025-11-28 02:50:09] 2025-11-28 01:49:30,202 | INFO     | sum of deviations: 2044086306674.7485
[2025-11-28 02:50:09] 2025-11-28 01:49:30,203 | INFO     | mean x: 1764252780.0519385
[2025-11-28 02:50:09] 2025-11-28 01:49:30,203 | INFO     | mean y: 2837845.679590344
[2025-11-28 02:50:09] 2025-11-28 01:49:30,203 | INFO     | intersect: -4549949694.245971
[2025-11-28 02:50:09] 2025-11-28 01:49:30,205 | INFO     | chi2: 18.90165450404521
[2025-11-28 02:50:09] 2025-11-28 01:49:30,205 | INFO     | current chi2=18.90165450404521 (change=19.865030165467395 %)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,205 | INFO     | left removable region: 10
[2025-11-28 02:50:09] 2025-11-28 01:49:30,207 | INFO     | sum of square deviations: 773136539664.0417
[2025-11-28 02:50:09] 2025-11-28 01:49:30,268 | INFO     | sum of deviations: 2122667395180.611
[2025-11-28 02:50:09] 2025-11-28 01:49:30,268 | INFO     | mean x: 1764252749.560472
[2025-11-28 02:50:09] 2025-11-28 01:49:30,269 | INFO     | mean y: 2856434.425516224
[2025-11-28 02:50:09] 2025-11-28 01:49:30,269 | INFO     | intersect: -4840947468.539766
[2025-11-28 02:50:09] 2025-11-28 01:49:30,270 | INFO     | chi2: 11.386793477108933
[2025-11-28 02:50:09] 2025-11-28 01:49:30,271 | INFO     | current memory leak: 2.75 B/s (using 1356 data points, chi2=11.39)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | ..............................
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | . Timing measurements:
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | . get job = 0 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | . initial setup = 2 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | . payload setup = 150 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | . stage-in = 0 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,272 | INFO     | . payload execution = 83804 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,273 | INFO     | . stage-out = 3 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,273 | INFO     | . log creation = 1 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,273 | INFO     | ..............................
[2025-11-28 02:50:09] 2025-11-28 01:49:30,492 | INFO     | 
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | job summary report
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | --------------------------------------------------
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | PanDA job id: 6895365662
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | task id: 47556137
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | errors: (none)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 02:50:09] 2025-11-28 01:49:30,493 | INFO     | pilot state: finished 
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | transexitcode: 0
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | exeerrorcode: 0
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | exeerrordiag: 
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | exitcode: 0
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | exitmsg: OK
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | cpuconsumptiontime: 315339 s
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | nevents: 1000
[2025-11-28 02:50:09] 2025-11-28 01:49:30,494 | INFO     | neventsw: 0
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | pid: 16584
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | pgrp: 16584
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | corecount: 8
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | event service: False
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | sizes: {0: 2283430, 1: 2284286, 2: 2284286, 13: 2284314, 23: 2284370, 34: 2284398, 45: 2284554, 56: 2284582, 66: 2284610, 77: 2284638, 87: 2284956, 88: 2285264, 83
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | --------------------------------------------------
[2025-11-28 02:50:09] 2025-11-28 01:49:30,495 | INFO     | 
[2025-11-28 02:50:09] 2025-11-28 01:49:30,496 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-11-28 02:50:09] 2025-11-28 01:49:30,726 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,726 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,726 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,729 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 02:50:09] 2025-11-28 01:49:30,729 | INFO     | job 6895365662 has completed (purged errors)
[2025-11-28 02:50:09] 2025-11-28 01:49:30,729 | INFO     | overall cleanup function is called
[2025-11-28 02:50:09] 2025-11-28 01:49:31,751 | INFO     | --- collectZombieJob: --- 10, [16584]
[2025-11-28 02:50:09] 2025-11-28 01:49:31,752 | INFO     | zombie collector waiting for pid 16584
[2025-11-28 02:50:09] 2025-11-28 01:49:31,752 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 02:50:09] 2025-11-28 01:49:31,752 | INFO     | collected zombie processes
[2025-11-28 02:50:09] 2025-11-28 01:49:31,752 | INFO     | will attempt to kill all subprocesses of pid=16584
[2025-11-28 02:50:09] 2025-11-28 01:49:31,912 | INFO     | process IDs to be killed: [16584] (in reverse order)
[2025-11-28 02:50:09] 2025-11-28 01:49:32,589 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 02:50:09] 2025-11-28 01:49:32,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 02:50:09] 2025-11-28 01:49:32,593 | INFO     | did not find any defunct processes belonging to 16584
[2025-11-28 02:50:09] 2025-11-28 01:49:32,595 | INFO     | did not find any defunct processes belonging to 16584
[2025-11-28 02:50:09] 2025-11-28 01:49:32,634 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 02:50:09] 2025-11-28 01:49:32,634 | INFO     | ready for new job
[2025-11-28 02:50:09] 2025-11-28 01:49:32,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 02:50:09] 2025-11-28 01:49:32,639 | INFO     | ***************************************
[2025-11-28 02:50:09] 2025-11-28 01:49:32,640 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 02:50:09] 2025-11-28 01:49:32,640 | INFO     | ***************************************
[2025-11-28 02:50:09] 2025-11-28 01:49:32,640 | INFO     | 
[2025-11-28 02:50:09] 2025-11-28 01:49:32,640 | INFO     | pilot is running in a VM
[2025-11-28 02:50:09] 2025-11-28 01:49:32,641 | INFO     | architecture information:
[2025-11-28 02:50:09] 2025-11-28 01:49:32,641 | INFO     | executing command: cat /etc/os-release
[2025-11-28 02:50:09] 2025-11-28 01:49:32,788 | INFO     | cat /etc/os-release:
[2025-11-28 02:50:09] NAME="CentOS Linux"
[2025-11-28 02:50:09] VERSION="7 (Core)"
[2025-11-28 02:50:09] ID="centos"
[2025-11-28 02:50:09] ID_LIKE="rhel fedora"
[2025-11-28 02:50:09] VERSION_ID="7"
[2025-11-28 02:50:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 02:50:09] ANSI_COLOR="0;31"
[2025-11-28 02:50:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 02:50:09] HOME_URL="https://www.centos.org/"
[2025-11-28 02:50:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 02:50:09] 
[2025-11-28 02:50:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 02:50:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 02:50:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 02:50:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 02:50:09] 
[2025-11-28 02:50:09] 2025-11-28 01:49:32,788 | INFO     | ***************************************
[2025-11-28 02:50:09] 2025-11-28 01:49:33,291 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-11-28 02:50:09] 2025-11-28 01:49:33,576 | INFO     | sufficient remaining disk space (495299067904 B)
[2025-11-28 02:50:09] 2025-11-28 01:49:33,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 02:50:09] 2025-11-28 01:49:33,576 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 02:50:09] 2025-11-28 01:49:33,576 | INFO     | update_server=False
[2025-11-28 02:50:09] 2025-11-28 01:49:33,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 02:50:09] 2025-11-28 01:49:33,578 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 02:50:09] 2025-11-28 01:49:33,588 | INFO     | all job control threads have been joined
[2025-11-28 02:50:09] 2025-11-28 01:49:33,648 | INFO     | all data control threads have been joined
[2025-11-28 02:50:09] 2025-11-28 01:49:33,851 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 02:50:09] 2025-11-28 01:49:33,852 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 02:50:09] 2025-11-28 01:49:33,852 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:50:09] 2025-11-28 01:49:33,852 | INFO     | will abort loop
[2025-11-28 02:50:09] 2025-11-28 01:49:33,881 | INFO     | all payload control threads have been joined
[2025-11-28 02:50:09] 2025-11-28 01:49:34,476 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 02:50:09] 2025-11-28 01:49:34,582 | INFO     | [job] retrieve thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:34,594 | INFO     | [job] control thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:34,653 | INFO     | [data] control thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:34,838 | INFO     | [payload] failed_post thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:34,857 | INFO     | [job] job monitor thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:34,890 | INFO     | [payload] control thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,103 | INFO     | [payload] validate_post thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,193 | INFO     | [job] validate thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,207 | INFO     | [data] copytool_in thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,338 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,410 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,418 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:50:09] 2025-11-28 01:49:35,556 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:35,958 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:36,423 | INFO     | [job] queue monitor thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:36,483 | INFO     | [data] copytool_out thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:37,587 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 02:50:09] 2025-11-28 01:49:58,305 | INFO     | [monitor] cgroup control has ended
[2025-11-28 02:50:09] 2025-11-28 01:50:00,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140601811425088)>', '<ExcThread(monitor, started 140601358006016)>']
[2025-11-28 02:50:09] 2025-11-28 01:50:02,804 | INFO     | PID=10027 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 02:50:09] 2025-11-28 01:50:02,804 | INFO     | .. there are 9 such processes running
[2025-11-28 02:50:09] 2025-11-28 01:50:02,805 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 02:50:09] 2025-11-28 01:50:02,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 02:50:09] 2025-11-28 01:50:02,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 02:50:09] 2025-11-28 01:50:02,805 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 02:50:09] 2025-11-28 01:50:02,805 | INFO     | [monitor] control thread has ended
[2025-11-28 02:50:09] 2025-11-28 01:50:05,348 | INFO     | all workflow threads have been joined
[2025-11-28 02:50:09] 2025-11-28 01:50:05,348 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 02:50:09] 2025-11-28 01:50:05,349 | INFO     | traces error code: 0
[2025-11-28 02:50:09] 2025-11-28 01:50:05,349 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 02:50:09] 2025-11-28 01:50:05,631 [wrapper] ==== pilot stdout END ====
[2025-11-28 02:50:09] 2025-11-28 01:50:05,733 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 02:50:09] 2025-11-28 01:50:05,830 [wrapper] pilotpid: 10027
[2025-11-28 02:50:09] 2025-11-28 01:50:05,907 [wrapper] Pilot exit status: 0
[2025-11-28 02:50:09] 2025-11-28 01:50:06,294 [wrapper] pandaids: 6895365662
[2025-11-28 02:50:09] 2025-11-28 01:50:07,143 [wrapper] cleanup supervisor_pilot 20011 10028
[2025-11-28 02:50:09] 2025-11-28 01:50:07,224 [wrapper] Test setup, not cleaning
[2025-11-28 02:50:09] 2025-11-28 01:50:07,296 [wrapper] apfmon messages muted
[2025-11-28 02:50:09] 2025-11-28 01:50:07,382 [wrapper] ==== wrapper stdout END ====
[2025-11-28 02:50:09] 2025-11-28 01:50:07,455 [wrapper] ==== wrapper stderr END ====
[2025-11-28 02:50:09]  *** Error codes and diagnostics ***
[2025-11-28 02:50:09]     "exeErrorCode": 0,
[2025-11-28 02:50:09]     "exeErrorDiag": "",
[2025-11-28 02:50:09]     "pilotErrorCode": 0,
[2025-11-28 02:50:09]     "pilotErrorDiag": "",
[2025-11-28 02:50:09]  *** Listing of results directory ***
[2025-11-28 02:50:09] total 1332320
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc    576529 Nov 23 18:07 pilot3.tar.gz
[2025-11-28 02:50:09] -rwx------. 1 boinc boinc     36292 Nov 23 18:32 runpilot2-wrapper.sh
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc      5112 Nov 23 18:32 queuedata.json
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc       100 Nov 27 03:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 02:50:09] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 03:21 run_atlas
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc       105 Nov 27 03:21 job.xml
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc      6391 Nov 27 03:21 init_data.xml
[2025-11-28 02:50:09] -rw-r--r--. 2 boinc boinc 410242707 Nov 27 03:21 EVNT.47483658._000829.pool.root.1
[2025-11-28 02:50:09] -rw-r--r--. 2 boinc boinc     15847 Nov 27 03:21 start_atlas.sh
[2025-11-28 02:50:09] drwxrwx--x. 2 boinc boinc        68 Nov 27 03:21 shared
[2025-11-28 02:50:09] -rw-r--r--. 2 boinc boinc    590100 Nov 27 03:21 input.tar.gz
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc         0 Nov 27 03:21 boinc_lockfile
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc      2782 Nov 27 03:21 pandaJob.out
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc    991554 Nov 27 03:25 agis_schedconf.cvmfs.json
[2025-11-28 02:50:09] drwx------. 5 boinc boinc      4096 Nov 27 03:25 pilot3
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc       533 Nov 28 02:14 boinc_task_state.xml
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc 922802375 Nov 28 02:46 HITS.47556137._008151.pool.root.1
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc      1028 Nov 28 02:47 memory_monitor_summary.json
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc   1516240 Nov 28 02:47 agis_ddmendpoints.agis.ALL.json
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc   2451281 Nov 28 02:47 log.47556137._008151.job.log.tgz.1
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc      8626 Nov 28 02:49 heartbeat.json
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc      8192 Nov 28 02:49 boinc_mmap_file
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc        29 Nov 28 02:49 wrapper_checkpoint.txt
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc        95 Nov 28 02:50 pilot_heartbeat.json
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc      5070 Nov 28 02:50 pilotlog.txt
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc  11220380 Nov 28 02:50 log.47556137._008151.job.log.1
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc       353 Nov 28 02:50 output.list
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc       620 Nov 28 02:50 runtime_log
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc  13690880 Nov 28 02:50 result.tar.gz
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc       662 Nov 28 02:50 zRAODmS8Sh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLfIKDmkUucxm.diag
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc      8817 Nov 28 02:50 runtime_log.err
[2025-11-28 02:50:09] -rw-r--r--. 1 boinc boinc     21384 Nov 28 02:50 stderr.txt
[2025-11-28 02:50:09] HITS file was successfully produced:
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc 922802375 Nov 28 02:46 shared/HITS.pool.root.1
[2025-11-28 02:50:09]  *** Contents of shared directory: ***
[2025-11-28 02:50:09] total 1315772
[2025-11-28 02:50:09] -rw-r--r--. 2 boinc boinc 410242707 Nov 27 03:21 ATLAS.root_0
[2025-11-28 02:50:09] -rw-r--r--. 2 boinc boinc     15847 Nov 27 03:21 start_atlas.sh
[2025-11-28 02:50:09] -rw-r--r--. 2 boinc boinc    590100 Nov 27 03:21 input.tar.gz
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc 922802375 Nov 28 02:46 HITS.pool.root.1
[2025-11-28 02:50:09] -rw-------. 1 boinc boinc  13690880 Nov 28 02:50 result.tar.gz
02:50:11 (6215): run_atlas exited; CPU time 315923.081820
02:50:11 (6215): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN