Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:30 (21896): wrapper (7.7.26015): starting
08:40:30 (21896): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 08:40:30] Arguments: --nthreads 8
[2025-11-24 08:40:30] Threads: 8
[2025-11-24 08:40:30] Checking for CVMFS
[2025-11-24 08:40:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:40:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:40:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:40:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:40:30] 2.11.2.0 12825 114852 138416 153247 1 82 10334916 18432001 1885 130560 0 79974176 99.975 4561083 22712 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:40:30] CVMFS is ok
[2025-11-24 08:40:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:40:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:40:30] Further information can be found at the LHC@home message board.
[2025-11-24 08:40:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:40:30] Checking for apptainer binary...
[2025-11-24 08:40:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:40:30] Running /usr/bin/apptainer --version
[2025-11-24 08:40:30] apptainer version 1.3.2-1.el7
[2025-11-24 08:40:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:40:31] c-206-8.aglt2.org
[2025-11-24 08:40:31] apptainer works
[2025-11-24 08:40:31] Set ATHENA_PROC_NUMBER=8
[2025-11-24 08:40:31] Set ATHENA_CORE_NUMBER=8
[2025-11-24 08:40:31] Starting ATLAS job with PandaID=6895348429
[2025-11-24 08:40:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 03:42:42]  *** The last 200 lines of the pilot log: ***
[2025-11-25 03:42:42] 2025-11-25 08:41:36,908 | INFO     | maximum number of monitored processes: 16
[2025-11-25 03:42:42] 2025-11-25 08:41:37,664 | INFO     | time since job start (68455s) is within the limit (172800.0s)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,552 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 03:42:42] 2025-11-25 08:41:38,558 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2483.4583333333335
[2025-11-25 03:42:42] 2025-11-25 08:41:38,562 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895348429/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,563 | INFO     | extracted standard info from prmon json
[2025-11-25 03:42:42] 2025-11-25 08:41:38,563 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 03:42:42] 2025-11-25 08:41:38,563 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 03:42:42] 2025-11-25 08:41:38,594 | INFO     | fitting pss+swap vs Time
[2025-11-25 03:42:42] 2025-11-25 08:41:38,595 | INFO     | sum of square deviations: 437981363109.63257
[2025-11-25 03:42:42] 2025-11-25 08:41:38,631 | INFO     | sum of deviations: 2112165776711.056
[2025-11-25 03:42:42] 2025-11-25 08:41:38,632 | INFO     | mean x: 1764025859.0623887
[2025-11-25 03:42:42] 2025-11-25 08:41:38,632 | INFO     | mean y: 2874590.9420677363
[2025-11-25 03:42:42] 2025-11-25 08:41:38,632 | INFO     | intersect: -8504142744.889757
[2025-11-25 03:42:42] 2025-11-25 08:41:38,633 | INFO     | chi2: 4.833022138515421
[2025-11-25 03:42:42] 2025-11-25 08:41:38,634 | INFO     | sum of square deviations: 432152227660.5447
[2025-11-25 03:42:42] 2025-11-25 08:41:38,656 | INFO     | sum of deviations: 2434427046584.701
[2025-11-25 03:42:42] 2025-11-25 08:41:38,656 | INFO     | mean x: 1764025706.564906
[2025-11-25 03:42:42] 2025-11-25 08:41:38,656 | INFO     | mean y: 2883019.017905103
[2025-11-25 03:42:42] 2025-11-25 08:41:38,656 | INFO     | intersect: -9934337284.531097
[2025-11-25 03:42:42] 2025-11-25 08:41:38,657 | INFO     | chi2: 2.4006981767190494
[2025-11-25 03:42:42] 2025-11-25 08:41:38,658 | INFO     | current chi2=2.4006981767190494 (change=50.32718435971242 %)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,659 | INFO     | sum of square deviations: 426374978781.07574
[2025-11-25 03:42:42] 2025-11-25 08:41:38,682 | INFO     | sum of deviations: 2486631293957.2534
[2025-11-25 03:42:42] 2025-11-25 08:41:38,682 | INFO     | mean x: 1764025554.0665467
[2025-11-25 03:42:42] 2025-11-25 08:41:38,683 | INFO     | mean y: 2884394.4019784173
[2025-11-25 03:42:42] 2025-11-25 08:41:38,683 | INFO     | intersect: -10284964012.233576
[2025-11-25 03:42:42] 2025-11-25 08:41:38,684 | INFO     | chi2: 2.238121527008908
[2025-11-25 03:42:42] 2025-11-25 08:41:38,684 | INFO     | current chi2=2.238121527008908 (change=6.772057032689097 %)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,684 | INFO     | right removable region: 1111
[2025-11-25 03:42:42] 2025-11-25 08:41:38,685 | INFO     | sum of square deviations: 432151842750.5445
[2025-11-25 03:42:42] 2025-11-25 08:41:38,712 | INFO     | sum of deviations: 1824491277337.474
[2025-11-25 03:42:42] 2025-11-25 08:41:38,712 | INFO     | mean x: 1764026011.564906
[2025-11-25 03:42:42] 2025-11-25 08:41:38,712 | INFO     | mean y: 2882107.8692927486
[2025-11-25 03:42:42] 2025-11-25 08:41:38,712 | INFO     | intersect: -7444616092.32791
[2025-11-25 03:42:42] 2025-11-25 08:41:38,714 | INFO     | chi2: 2.847734455371312
[2025-11-25 03:42:42] 2025-11-25 08:41:38,714 | INFO     | current chi2=2.847734455371312 (change=41.0775623666797 %)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,715 | INFO     | sum of square deviations: 426374549158.4668
[2025-11-25 03:42:42] 2025-11-25 08:41:38,762 | INFO     | sum of deviations: 1749713102085.205
[2025-11-25 03:42:42] 2025-11-25 08:41:38,762 | INFO     | mean x: 1764026164.063849
[2025-11-25 03:42:42] 2025-11-25 08:41:38,762 | INFO     | mean y: 2884081.3633093527
[2025-11-25 03:42:42] 2025-11-25 08:41:38,762 | INFO     | intersect: -7236149528.3479395
[2025-11-25 03:42:42] 2025-11-25 08:41:38,764 | INFO     | chi2: 2.793382573470872
[2025-11-25 03:42:42] 2025-11-25 08:41:38,764 | INFO     | current chi2=2.793382573470872 (change=1.908600775536615 %)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,764 | INFO     | left removable region: 20
[2025-11-25 03:42:42] 2025-11-25 08:41:38,766 | INFO     | sum of square deviations: 402671983197.799
[2025-11-25 03:42:42] 2025-11-25 08:41:38,807 | INFO     | sum of deviations: 2025346489971.8728
[2025-11-25 03:42:42] 2025-11-25 08:41:38,807 | INFO     | mean x: 1764026133.5673695
[2025-11-25 03:42:42] 2025-11-25 08:41:38,807 | INFO     | mean y: 2896540.4234647113
[2025-11-25 03:42:42] 2025-11-25 08:41:38,807 | INFO     | intersect: -8869744931.839893
[2025-11-25 03:42:42] 2025-11-25 08:41:38,809 | INFO     | chi2: 0.17071509279340225
[2025-11-25 03:42:42] 2025-11-25 08:41:38,809 | INFO     | current memory leak: 5.03 B/s (using 1091 data points, chi2=0.17)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,810 | INFO     | could have reported an average CPU frequency of 2621 MHz (41 samples)
[2025-11-25 03:42:42] 2025-11-25 08:41:38,811 | INFO     | ..............................
[2025-11-25 03:42:42] 2025-11-25 08:41:38,811 | INFO     | . Timing measurements:
[2025-11-25 03:42:42] 2025-11-25 08:41:38,811 | INFO     | . get job = 0 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,811 | INFO     | . initial setup = 2 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,811 | INFO     | . payload setup = 5 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,811 | INFO     | . stage-in = 0 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,812 | INFO     | . payload execution = 68423 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,812 | INFO     | . stage-out = 3 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,812 | INFO     | . log creation = 0 s
[2025-11-25 03:42:42] 2025-11-25 08:41:38,812 | INFO     | ..............................
[2025-11-25 03:42:42] 2025-11-25 08:41:39,161 | INFO     | 
[2025-11-25 03:42:42] 2025-11-25 08:41:39,161 | INFO     | job summary report
[2025-11-25 03:42:42] 2025-11-25 08:41:39,161 | INFO     | --------------------------------------------------
[2025-11-25 03:42:42] 2025-11-25 08:41:39,161 | INFO     | PanDA job id: 6895348429
[2025-11-25 03:42:42] 2025-11-25 08:41:39,161 | INFO     | task id: 47556137
[2025-11-25 03:42:42] 2025-11-25 08:41:39,162 | INFO     | errors: (none)
[2025-11-25 03:42:42] 2025-11-25 08:41:39,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 03:42:42] 2025-11-25 08:41:39,162 | INFO     | pilot state: finished 
[2025-11-25 03:42:42] 2025-11-25 08:41:39,162 | INFO     | transexitcode: 0
[2025-11-25 03:42:42] 2025-11-25 08:41:39,162 | INFO     | exeerrorcode: 0
[2025-11-25 03:42:42] 2025-11-25 08:41:39,162 | INFO     | exeerrordiag: 
[2025-11-25 03:42:42] 2025-11-25 08:41:39,163 | INFO     | exitcode: 0
[2025-11-25 03:42:42] 2025-11-25 08:41:39,163 | INFO     | exitmsg: OK
[2025-11-25 03:42:42] 2025-11-25 08:41:39,163 | INFO     | cpuconsumptiontime: 535205 s
[2025-11-25 03:42:42] 2025-11-25 08:41:39,163 | INFO     | nevents: 1000
[2025-11-25 03:42:42] 2025-11-25 08:41:39,163 | INFO     | neventsw: 0
[2025-11-25 03:42:42] 2025-11-25 08:41:39,167 | INFO     | pid: 425
[2025-11-25 03:42:42] 2025-11-25 08:41:39,168 | INFO     | pgrp: 425
[2025-11-25 03:42:42] 2025-11-25 08:41:39,168 | INFO     | corecount: 8
[2025-11-25 03:42:42] 2025-11-25 08:41:39,168 | INFO     | event service: False
[2025-11-25 03:42:42] 2025-11-25 08:41:39,168 | INFO     | sizes: {0: 2284037, 1: 2284236, 4: 2284498, 12: 2284526, 68432: 2340390, 68433: 2340389, 68437: 2349628, 68441: 2349914}
[2025-11-25 03:42:42] 2025-11-25 08:41:39,168 | INFO     | --------------------------------------------------
[2025-11-25 03:42:42] 2025-11-25 08:41:39,169 | INFO     | 
[2025-11-25 03:42:42] 2025-11-25 08:41:39,169 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 03:42:42] 2025-11-25 08:41:39,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,198 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 03:42:42] 2025-11-25 08:41:39,199 | INFO     | job 6895348429 has completed (purged errors)
[2025-11-25 03:42:42] 2025-11-25 08:41:39,199 | INFO     | overall cleanup function is called
[2025-11-25 03:42:42] 2025-11-25 08:41:40,212 | INFO     | --- collectZombieJob: --- 10, [425]
[2025-11-25 03:42:42] 2025-11-25 08:41:40,212 | INFO     | zombie collector waiting for pid 425
[2025-11-25 03:42:42] 2025-11-25 08:41:40,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 03:42:42] 2025-11-25 08:41:40,212 | INFO     | collected zombie processes
[2025-11-25 03:42:42] 2025-11-25 08:41:40,212 | INFO     | will attempt to kill all subprocesses of pid=425
[2025-11-25 03:42:42] 2025-11-25 08:41:40,389 | INFO     | process IDs to be killed: [425] (in reverse order)
[2025-11-25 03:42:42] 2025-11-25 08:41:40,443 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 03:42:42] 2025-11-25 08:41:40,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 03:42:42] 2025-11-25 08:41:40,450 | INFO     | did not find any defunct processes belonging to 425
[2025-11-25 03:42:42] 2025-11-25 08:41:40,455 | INFO     | did not find any defunct processes belonging to 425
[2025-11-25 03:42:42] 2025-11-25 08:41:40,457 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 03:42:42] 2025-11-25 08:41:40,457 | INFO     | ready for new job
[2025-11-25 03:42:42] 2025-11-25 08:41:40,458 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 03:42:42] 2025-11-25 08:41:40,462 | INFO     | ***************************************
[2025-11-25 03:42:42] 2025-11-25 08:41:40,462 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 03:42:42] 2025-11-25 08:41:40,463 | INFO     | ***************************************
[2025-11-25 03:42:42] 2025-11-25 08:41:40,463 | INFO     | 
[2025-11-25 03:42:42] 2025-11-25 08:41:40,464 | INFO     | architecture information:
[2025-11-25 03:42:42] 2025-11-25 08:41:40,465 | INFO     | executing command: cat /etc/os-release
[2025-11-25 03:42:42] 2025-11-25 08:41:40,478 | INFO     | cat /etc/os-release:
[2025-11-25 03:42:42] NAME="CentOS Linux"
[2025-11-25 03:42:42] VERSION="7 (Core)"
[2025-11-25 03:42:42] ID="centos"
[2025-11-25 03:42:42] ID_LIKE="rhel fedora"
[2025-11-25 03:42:42] VERSION_ID="7"
[2025-11-25 03:42:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 03:42:42] ANSI_COLOR="0;31"
[2025-11-25 03:42:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 03:42:42] HOME_URL="https://www.centos.org/"
[2025-11-25 03:42:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 03:42:42] 
[2025-11-25 03:42:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 03:42:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 03:42:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 03:42:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 03:42:42] 
[2025-11-25 03:42:42] 2025-11-25 08:41:40,478 | INFO     | ***************************************
[2025-11-25 03:42:42] 2025-11-25 08:41:40,981 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 03:42:42] 2025-11-25 08:41:40,995 | INFO     | sufficient remaining disk space (25016926208 B)
[2025-11-25 03:42:42] 2025-11-25 08:41:40,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 03:42:42] 2025-11-25 08:41:40,995 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 03:42:42] 2025-11-25 08:41:40,996 | INFO     | update_server=False
[2025-11-25 03:42:42] 2025-11-25 08:41:40,996 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 03:42:42] 2025-11-25 08:41:40,996 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:42:42] 2025-11-25 08:41:40,996 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 03:42:42] 2025-11-25 08:41:40,996 | INFO     | aborting loop
[2025-11-25 03:42:42] 2025-11-25 08:41:41,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 03:42:42] 2025-11-25 08:41:41,529 | INFO     | all job control threads have been joined
[2025-11-25 03:42:42] 2025-11-25 08:41:41,547 | INFO     | all data control threads have been joined
[2025-11-25 03:42:42] 2025-11-25 08:41:42,002 | INFO     | [job] job monitor thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,004 | INFO     | [job] retrieve thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,298 | INFO     | all payload control threads have been joined
[2025-11-25 03:42:42] 2025-11-25 08:41:42,400 | INFO     | [data] copytool_in thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,538 | INFO     | [job] control thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,553 | INFO     | [data] control thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,561 | INFO     | [job] validate thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,760 | INFO     | [payload] failed_post thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,902 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:42,909 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:43,005 | INFO     | [data] copytool_out thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:43,213 | INFO     | [payload] validate_post thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:43,275 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:43,303 | INFO     | [payload] control thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:43,953 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:42:42] 2025-11-25 08:41:44,958 | INFO     | [job] queue monitor thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:45,113 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:41:51,918 | INFO     | job.realtimelogging is not enabled
[2025-11-25 03:42:42] 2025-11-25 08:41:52,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 03:42:42] 2025-11-25 08:42:10,942 | INFO     | PID=26286 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 03:42:42] 2025-11-25 08:42:10,942 | INFO     | .. there are 3 such processes running
[2025-11-25 03:42:42] 2025-11-25 08:42:10,943 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 03:42:42] 2025-11-25 08:42:10,943 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 03:42:42] 2025-11-25 08:42:10,943 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 03:42:42] 2025-11-25 08:42:36,140 | INFO     | [monitor] cgroup control has ended
[2025-11-25 03:42:42] 2025-11-25 08:42:37,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139691635787584)>', '<ExcThread(monitor, started 139690900440832)>']
[2025-11-25 03:42:42] 2025-11-25 08:42:38,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 03:42:42] 2025-11-25 08:42:38,083 | INFO     | [monitor] control thread has ended
[2025-11-25 03:42:42] 2025-11-25 08:42:42,112 | INFO     | all workflow threads have been joined
[2025-11-25 03:42:42] 2025-11-25 08:42:42,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 03:42:42] 2025-11-25 08:42:42,153 | INFO     | traces error code: 0
[2025-11-25 03:42:42] 2025-11-25 08:42:42,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 03:42:42] 2025-11-25 08:42:42,259 [wrapper] ==== pilot stdout END ====
[2025-11-25 03:42:42] 2025-11-25 08:42:42,262 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 03:42:42] 2025-11-25 08:42:42,264 [wrapper] pilotpid: 26286
[2025-11-25 03:42:42] 2025-11-25 08:42:42,266 [wrapper] Pilot exit status: 0
[2025-11-25 03:42:42] 2025-11-25 08:42:42,274 [wrapper] pandaids: 6895348429
[2025-11-25 03:42:42] 2025-11-25 08:42:42,304 [wrapper] cleanup supervisor_pilot 29336 26287
[2025-11-25 03:42:42] 2025-11-25 08:42:42,307 [wrapper] Test setup, not cleaning
[2025-11-25 03:42:42] 2025-11-25 08:42:42,309 [wrapper] apfmon messages muted
[2025-11-25 03:42:42] 2025-11-25 08:42:42,311 [wrapper] ==== wrapper stdout END ====
[2025-11-25 03:42:42] 2025-11-25 08:42:42,313 [wrapper] ==== wrapper stderr END ====
[2025-11-25 03:42:42]  *** Error codes and diagnostics ***
[2025-11-25 03:42:42]     "exeErrorCode": 0,
[2025-11-25 03:42:42]     "exeErrorDiag": "",
[2025-11-25 03:42:42]     "pilotErrorCode": 0,
[2025-11-25 03:42:42]     "pilotErrorDiag": "",
[2025-11-25 03:42:42]  *** Listing of results directory ***
[2025-11-25 03:42:42] total 1330116
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 14:25 pilot3.tar.gz
[2025-11-25 03:42:42] -rwx------ 1 boincer umatlas     36292 Nov 22 14:50 runpilot2-wrapper.sh
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 14:50 queuedata.json
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas       100 Nov 24 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 03:42:42] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 08:40 run_atlas
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas       105 Nov 24 08:40 job.xml
[2025-11-25 03:42:42] -rw-r--r-- 2 boincer umatlas 411983703 Nov 24 08:40 EVNT.47483658._000479.pool.root.1
[2025-11-25 03:42:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:40 start_atlas.sh
[2025-11-25 03:42:42] drwxrwx--x 2 boincer umatlas      4096 Nov 24 08:40 shared
[2025-11-25 03:42:42] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 08:40 input.tar.gz
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas         0 Nov 24 08:40 boinc_lockfile
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas      2784 Nov 24 08:40 pandaJob.out
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas        57 Nov 24 08:40 setup.sh.local
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas    988280 Nov 24 08:40 agis_schedconf.cvmfs.json
[2025-11-25 03:42:42] drwx------ 5 boincer umatlas      4096 Nov 24 08:40 pilot3
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas       533 Nov 25 03:32 boinc_task_state.xml
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 03:40 init_data.xml
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas 922675760 Nov 25 03:40 HITS.47556137._004744.pool.root.1
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas      1067 Nov 25 03:41 memory_monitor_summary.json
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas   1516240 Nov 25 03:41 agis_ddmendpoints.agis.ALL.json
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas   2289351 Nov 25 03:41 log.47556137._004744.job.log.tgz.1
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas      8660 Nov 25 03:41 heartbeat.json
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas        95 Nov 25 03:42 pilot_heartbeat.json
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas        29 Nov 25 03:42 wrapper_checkpoint.txt
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 03:42 boinc_mmap_file
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas      4893 Nov 25 03:42 pilotlog.txt
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas   9443038 Nov 25 03:42 log.47556137._004744.job.log.1
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas       353 Nov 25 03:42 output.list
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas       620 Nov 25 03:42 runtime_log
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas  11755520 Nov 25 03:42 result.tar.gz
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas       667 Nov 25 03:42 YP8NDmdn8g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNMKKDmVEKP9m.diag
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas      9338 Nov 25 03:42 runtime_log.err
[2025-11-25 03:42:42] -rw-r--r-- 1 boincer umatlas     21224 Nov 25 03:42 stderr.txt
[2025-11-25 03:42:42] HITS file was successfully produced:
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas 922675760 Nov 25 03:40 shared/HITS.pool.root.1
[2025-11-25 03:42:42]  *** Contents of shared directory: ***
[2025-11-25 03:42:42] total 1315460
[2025-11-25 03:42:42] -rw-r--r-- 2 boincer umatlas 411983703 Nov 24 08:40 ATLAS.root_0
[2025-11-25 03:42:42] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:40 start_atlas.sh
[2025-11-25 03:42:42] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 08:40 input.tar.gz
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas 922675760 Nov 25 03:40 HITS.pool.root.1
[2025-11-25 03:42:42] -rw------- 1 boincer umatlas  11755520 Nov 25 03:42 result.tar.gz
03:42:43 (21896): run_atlas exited; CPU time 534769.107054
03:42:43 (21896): called boinc_finish(0)

</stderr_txt>
]]>

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