Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:52:44 (4190797): wrapper (7.7.26015): starting
05:52:44 (4190797): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 05:52:44] Arguments: --nthreads 12
[2025-11-24 05:52:44] Threads: 12
[2025-11-24 05:52:44] Checking for CVMFS
[2025-11-24 05:52:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:52:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:52:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:52:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:52:45] 2.11.5.0 2718463 25296 168636 153247 3 101 32943264 45568001 15476 130560 0 163899096 99.791 108385166 20905 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 05:52:45] CVMFS is ok
[2025-11-24 05:52:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:52:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:52:45] Further information can be found at the LHC@home message board.
[2025-11-24 05:52:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:52:45] Checking for apptainer binary...
[2025-11-24 05:52:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:52:45] Running /usr/bin/apptainer --version
[2025-11-24 05:52:45] apptainer version 1.4.1-1.el9
[2025-11-24 05:52:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:52:46] wns0043.triumf.lcg
[2025-11-24 05:52:46] apptainer works
[2025-11-24 05:52:46] Set ATHENA_PROC_NUMBER=12
[2025-11-24 05:52:46] Set ATHENA_CORE_NUMBER=12
[2025-11-24 05:52:46] Starting ATLAS job with PandaID=6895380381
[2025-11-24 05:52:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:59:13]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 05:59:14] 2025-11-24 13:58:18,649 | WARNING  | wrong length of table data, x=[1763992466.0, 1763992527.0], y=[1379.0, 373774.0] (must be same and length>=4)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | could have reported an average CPU frequency of 1323 MHz (4 samples)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | ..............................
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | . Timing measurements:
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | . get job = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . initial setup = 3 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . payload setup = 18 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . stage-in = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . payload execution = 115 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . stage-out = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . log creation = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | ..............................
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895380381/pilotlog.txt
[2025-11-24 05:59:14] 2025-11-24 13:58:18,670 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 05:59:14] - Log from pilotlog.txt -
[2025-11-24 05:59:14] 2025-11-24 13:58:18,647 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895380381/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | INFO     | extracted standard info from prmon json
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 05:59:14] 2025-11-24 13:58:18,649 | WARNING  | wrong length of table data, x=[1763992466.0, 1763992527.0], y=[1379.0, 373774.0] (must be same and length>=4)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | could have reported an average CPU frequency of 1323 MHz (4 samples)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | ..............................
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | . Timing measurements:
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | . get job = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . initial setup = 3 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . payload setup = 18 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . stage-in = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . payload execution = 115 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . stage-out = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . log creation = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | ..............................
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895380381/pilotlog.txt
[2025-11-24 05:59:14] 2025-11-24 13:58:18,670 | WARNING  | 
[2025-11-24 05:59:14] [begin log extracts]
[2025-11-24 05:59:14] - Log from pilotlog.txt -
[2025-11-24 05:59:14] 2025-11-24 13:58:18,647 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895380381/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | INFO     | extracted standard info from prmon json
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 05:59:14] 2025-11-24 13:58:18,648 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 05:59:14] 2025-11-24 13:58:18,649 | WARNING  | wrong length of table data, x=[1763992466.0, 1763992527.0], y=[1379.0, 373774.0] (must be same and length>=4)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | could have reported an average CPU frequency of 1323 MHz (4 samples)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | ..............................
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | . Timing measurements:
[2025-11-24 05:59:14] 2025-11-24 13:58:18,650 | INFO     | . get job = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . initial setup = 3 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . payload setup = 18 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . stage-in = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . payload execution = 115 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . stage-out = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | . log creation = 0 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | ..............................
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 05:59:14] 2025-11-24 13:58:18,651 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895380381/pilotlog.txt
[2025-11-24 05:59:14] [end log extracts]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,671 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,672 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 05:59:14] 2025-11-24 13:58:18,818 | INFO     | 
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | job summary report
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | --------------------------------------------------
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | PanDA job id: 6895380381
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | task id: 47556137
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 05:55:52,220 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:59:14] 2025-11-24 13:58:18,819 | INFO     | pilot state: failed 
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | transexitcode: 65
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | exeerrorcode: 65
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | exitcode: 65
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | cpuconsumptiontime: 74 s
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | nevents: 0
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | neventsw: 0
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | pid: 7289
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | pgrp: 7289
[2025-11-24 05:59:14] 2025-11-24 13:58:18,820 | INFO     | corecount: 12
[2025-11-24 05:59:14] 2025-11-24 13:58:18,821 | INFO     | event service: False
[2025-11-24 05:59:14] 2025-11-24 13:58:18,821 | INFO     | sizes: {0: 2283431, 1: 2284113, 2: 2284312, 13: 2284312, 17: 2284630, 24: 2284658, 138: 2310232, 139: 2310208, 141: 2314526, 142: 2314554, 276: 2314720}
[2025-11-24 05:59:14] 2025-11-24 13:58:18,821 | INFO     | --------------------------------------------------
[2025-11-24 05:59:14] 2025-11-24 13:58:18,821 | INFO     | 
[2025-11-24 05:59:14] 2025-11-24 13:58:18,821 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 05:59:14] 2025-11-24 13:58:18,844 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,846 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,847 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,847 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,847 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:59:14] 2025-11-24 13:58:18,848 | INFO     | job 6895380381 has completed (purged errors)
[2025-11-24 05:59:14] 2025-11-24 13:58:18,848 | INFO     | overall cleanup function is called
[2025-11-24 05:59:14] 2025-11-24 13:58:19,857 | INFO     | --- collectZombieJob: --- 10, [7289]
[2025-11-24 05:59:14] 2025-11-24 13:58:19,857 | INFO     | zombie collector waiting for pid 7289
[2025-11-24 05:59:14] 2025-11-24 13:58:19,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:59:14] 2025-11-24 13:58:19,857 | INFO     | collected zombie processes
[2025-11-24 05:59:14] 2025-11-24 13:58:19,858 | INFO     | will attempt to kill all subprocesses of pid=7289
[2025-11-24 05:59:14] 2025-11-24 13:58:20,365 | INFO     | process IDs to be killed: [7289] (in reverse order)
[2025-11-24 05:59:14] 2025-11-24 13:58:20,858 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:59:14] 2025-11-24 13:58:20,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:59:14] 2025-11-24 13:58:20,882 | INFO     | did not find any defunct processes belonging to 7289
[2025-11-24 05:59:14] 2025-11-24 13:58:20,905 | INFO     | did not find any defunct processes belonging to 7289
[2025-11-24 05:59:14] 2025-11-24 13:58:20,908 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:59:14] 2025-11-24 13:58:20,909 | INFO     | ready for new job
[2025-11-24 05:59:14] 2025-11-24 13:58:20,909 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:59:14] 2025-11-24 13:58:20,910 | INFO     | ***************************************
[2025-11-24 05:59:14] 2025-11-24 13:58:20,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:59:14] 2025-11-24 13:58:20,911 | INFO     | ***************************************
[2025-11-24 05:59:14] 2025-11-24 13:58:20,911 | INFO     | 
[2025-11-24 05:59:14] 2025-11-24 13:58:20,921 | INFO     | architecture information:
[2025-11-24 05:59:14] 2025-11-24 13:58:20,925 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:59:14] 2025-11-24 13:58:20,955 | INFO     | cat /etc/os-release:
[2025-11-24 05:59:14] NAME="CentOS Linux"
[2025-11-24 05:59:14] VERSION="7 (Core)"
[2025-11-24 05:59:14] ID="centos"
[2025-11-24 05:59:14] ID_LIKE="rhel fedora"
[2025-11-24 05:59:14] VERSION_ID="7"
[2025-11-24 05:59:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:59:14] ANSI_COLOR="0;31"
[2025-11-24 05:59:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:59:14] HOME_URL="https://www.centos.org/"
[2025-11-24 05:59:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:59:14] 
[2025-11-24 05:59:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:59:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:59:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:59:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:59:14] 
[2025-11-24 05:59:14] 2025-11-24 13:58:20,956 | INFO     | ***************************************
[2025-11-24 05:59:14] 2025-11-24 13:58:21,462 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 05:59:14] 2025-11-24 13:58:21,507 | INFO     | sufficient remaining disk space (1714709069824 B)
[2025-11-24 05:59:14] 2025-11-24 13:58:21,508 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:59:14] 2025-11-24 13:58:21,508 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:59:14] 2025-11-24 13:58:21,509 | INFO     | update_server=False
[2025-11-24 05:59:14] 2025-11-24 13:58:21,509 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:59:14] 2025-11-24 13:58:21,510 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:59:14] 2025-11-24 13:58:21,510 | INFO     | aborting loop
[2025-11-24 05:59:14] 2025-11-24 13:58:21,539 | INFO     | all payload control threads have been joined
[2025-11-24 05:59:14] 2025-11-24 13:58:21,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:59:14] 2025-11-24 13:58:22,199 | INFO     | all data control threads have been joined
[2025-11-24 05:59:14] 2025-11-24 13:58:22,366 | INFO     | all job control threads have been joined
[2025-11-24 05:59:14] 2025-11-24 13:58:22,397 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:59:14] 2025-11-24 13:58:22,515 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:22,516 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:22,545 | INFO     | [payload] control thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:22,580 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:22,581 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:22,827 | INFO     | [job] validate thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,042 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,206 | INFO     | [data] control thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,358 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,371 | INFO     | [job] control thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,745 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:59:14] 2025-11-24 13:58:23,871 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:23,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:24,403 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:24,856 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:25,835 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:59:14] 2025-11-24 13:58:51,727 | INFO     | PID=512 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-24 05:59:14] 2025-11-24 13:58:51,727 | INFO     | .. there are 20 such processes running
[2025-11-24 05:59:14] 2025-11-24 13:58:51,728 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:59:14] 2025-11-24 13:58:51,728 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:59:14] 2025-11-24 13:58:51,728 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:59:14] 2025-11-24 13:59:06,212 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:59:14] 2025-11-24 13:59:07,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140165558536000)>', '<ExcThread(monitor, started 140165141997312)>']
[2025-11-24 05:59:14] 2025-11-24 13:59:08,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:59:14] 2025-11-24 13:59:08,829 | INFO     | [monitor] control thread has ended
[2025-11-24 05:59:14] 2025-11-24 13:59:12,879 | INFO     | all workflow threads have been joined
[2025-11-24 05:59:14] 2025-11-24 13:59:12,879 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:59:14] 2025-11-24 13:59:12,880 | INFO     | traces error code: 0
[2025-11-24 05:59:14] 2025-11-24 13:59:12,880 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:59:14] 2025-11-24 13:59:13,174 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:59:14] 2025-11-24 13:59:13,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:59:14] 2025-11-24 13:59:13,181 [wrapper] pilotpid: 512
[2025-11-24 05:59:14] 2025-11-24 13:59:13,185 [wrapper] Pilot exit status: 0
[2025-11-24 05:59:14] 2025-11-24 13:59:13,300 [wrapper] pandaids: 6895380381
[2025-11-24 05:59:14] 2025-11-24 13:59:13,500 [wrapper] cleanup supervisor_pilot     518 513
[2025-11-24 05:59:14] 2025-11-24 13:59:13,524 [wrapper] Test setup, not cleaning
[2025-11-24 05:59:14] 2025-11-24 13:59:13,532 [wrapper] apfmon messages muted
[2025-11-24 05:59:14] 2025-11-24 13:59:13,566 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:59:14] 2025-11-24 13:59:13,600 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:59:14]  *** Error codes and diagnostics ***
[2025-11-24 05:59:14]     "exeErrorCode": 65,
[2025-11-24 05:59:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 05:59:14]     "pilotErrorCode": 1305,
[2025-11-24 05:59:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 05:59:14]  *** Listing of results directory ***
[2025-11-24 05:59:14] total 401644
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc      5112 Nov 23 18:53 queuedata.json
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc    576529 Nov 23 18:53 pilot3.tar.gz
[2025-11-24 05:59:14] -rwx------. 1 boinc boinc     36292 Nov 23 18:56 runpilot2-wrapper.sh
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc       100 Nov 24 05:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:59:14] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 05:52 run_atlas
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc       105 Nov 24 05:52 job.xml
[2025-11-24 05:59:14] -rw-r--r--. 2 boinc boinc 407067717 Nov 24 05:52 EVNT.47483658._000990.pool.root.1
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc      6595 Nov 24 05:52 init_data.xml
[2025-11-24 05:59:14] -rw-r--r--. 2 boinc boinc     15847 Nov 24 05:52 start_atlas.sh
[2025-11-24 05:59:14] drwxrwx--x. 2 boinc boinc      4096 Nov 24 05:52 shared
[2025-11-24 05:59:14] -rw-r--r--. 2 boinc boinc    590103 Nov 24 05:52 input.tar.gz
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc         0 Nov 24 05:52 boinc_lockfile
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc      2785 Nov 24 05:52 pandaJob.out
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc    988280 Nov 24 05:53 agis_schedconf.cvmfs.json
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc   1516227 Nov 24 05:53 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:59:14] drwx------. 5 boinc boinc      4096 Nov 24 05:53 pilot3
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc       525 Nov 24 05:55 boinc_task_state.xml
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc       987 Nov 24 05:55 memory_monitor_summary.json
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc     48334 Nov 24 05:56 log.47556137._009765.job.log.tgz.1
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc        95 Nov 24 05:58 pilot_heartbeat.json
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc     10337 Nov 24 05:58 heartbeat.json
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc      8192 Nov 24 05:59 boinc_mmap_file
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc        23 Nov 24 05:59 wrapper_checkpoint.txt
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc      4819 Nov 24 05:59 pilotlog.txt
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc    105531 Nov 24 05:59 log.47556137._009765.job.log.1
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc       186 Nov 24 05:59 output.list
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc       620 Nov 24 05:59 runtime_log
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc    174080 Nov 24 05:59 result.tar.gz
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc      8636 Nov 24 05:59 runtime_log.err
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc       643 Nov 24 05:59 oHrKDmtvbh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtMLKDmY5bumn.diag
[2025-11-24 05:59:14] -rw-r--r--. 1 boinc boinc     22495 Nov 24 05:59 stderr.txt
[2025-11-24 05:59:14] No HITS result produced
[2025-11-24 05:59:14]  *** Contents of shared directory: ***
[2025-11-24 05:59:14] total 398300
[2025-11-24 05:59:14] -rw-r--r--. 2 boinc boinc 407067717 Nov 24 05:52 ATLAS.root_0
[2025-11-24 05:59:14] -rw-r--r--. 2 boinc boinc     15847 Nov 24 05:52 start_atlas.sh
[2025-11-24 05:59:14] -rw-r--r--. 2 boinc boinc    590103 Nov 24 05:52 input.tar.gz
[2025-11-24 05:59:14] -rw-------. 1 boinc boinc    174080 Nov 24 05:59 result.tar.gz
05:59:16 (4190797): run_atlas exited; CPU time 74.384972
05:59:16 (4190797): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN