Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:44:17 (11381): wrapper (7.7.26015): starting
00:44:17 (11381): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:44:17] Arguments: --nthreads 8
[2025-11-27 00:44:17] Threads: 8
[2025-11-27 00:44:17] Checking for CVMFS
[2025-11-27 00:44:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:44:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:44:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:44:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:44:20] 2.11.2.0 26867 285884 139564 153340 2 85 20084404 25165825 1288 130560 10 136174129 99.876 77790561 2828 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 00:44:20] CVMFS is ok
[2025-11-27 00:44:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:44:20] Checking for apptainer binary...
[2025-11-27 00:44:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:44:20] Running /usr/bin/apptainer --version
[2025-11-27 00:44:20] apptainer version 1.3.2-1.el7
[2025-11-27 00:44:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:44:36] cg-vwn435.simple-grid.lan
[2025-11-27 00:44:36] apptainer works
[2025-11-27 00:44:36] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:44:36] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:44:36] Starting ATLAS job with PandaID=6895355350
[2025-11-27 00:44:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:14:40]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:14:40] 2025-11-27 23:13:50,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:14:40] 2025-11-27 23:13:50,930 | INFO     | time since job start (84300s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:13:52,890 | INFO     | monitor loop #5673: job 0:6895355350 is in state 'finished'
[2025-11-28 00:14:40] 2025-11-27 23:13:52,891 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:14:40] 2025-11-27 23:13:52,937 | INFO     | time since job start (84302s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:13:54,947 | INFO     | time since job start (84304s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:13:55,395 | INFO     | monitor loop #5674: job 0:6895355350 is in state 'finished'
[2025-11-28 00:14:40] 2025-11-27 23:13:55,396 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:14:40] 2025-11-27 23:13:56,954 | INFO     | time since job start (84306s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:13:57,903 | INFO     | monitor loop #5675: job 0:6895355350 is in state 'finished'
[2025-11-28 00:14:40] 2025-11-27 23:13:57,904 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:14:40] 2025-11-27 23:13:58,961 | INFO     | time since job start (84308s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:14:00,408 | INFO     | monitor loop #5676: job 0:6895355350 is in state 'finished'
[2025-11-28 00:14:40] 2025-11-27 23:14:00,409 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:14:40] 2025-11-27 23:14:00,968 | INFO     | time since job start (84310s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:14:01,879 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 00:14:40] 2025-11-27 23:14:01,881 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 00:14:40] 2025-11-27 23:14:01,884 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6895355350/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:14:40] 2025-11-27 23:14:01,885 | INFO     | extracted standard info from prmon json
[2025-11-28 00:14:40] 2025-11-27 23:14:01,885 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:14:40] 2025-11-27 23:14:01,885 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:14:40] 2025-11-27 23:14:01,916 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:14:40] 2025-11-27 23:14:01,918 | INFO     | sum of square deviations: 802581677004.1165
[2025-11-28 00:14:40] 2025-11-27 23:14:01,999 | INFO     | sum of deviations: 2777300396019.333
[2025-11-28 00:14:40] 2025-11-27 23:14:01,999 | INFO     | mean x: 1764243277.0968683
[2025-11-28 00:14:40] 2025-11-27 23:14:02,000 | INFO     | mean y: 2841822.2381646032
[2025-11-28 00:14:40] 2025-11-27 23:14:02,000 | INFO     | intersect: -6102248404.149406
[2025-11-28 00:14:40] 2025-11-27 23:14:02,001 | INFO     | chi2: 23.85686815789332
[2025-11-28 00:14:40] 2025-11-27 23:14:02,003 | INFO     | sum of square deviations: 793845823688.0792
[2025-11-28 00:14:40] 2025-11-27 23:14:02,092 | INFO     | sum of deviations: 3244580248226.978
[2025-11-28 00:14:40] 2025-11-27 23:14:02,092 | INFO     | mean x: 1764243124.6008773
[2025-11-28 00:14:40] 2025-11-27 23:14:02,092 | INFO     | mean y: 2849977.847953216
[2025-11-28 00:14:40] 2025-11-27 23:14:02,092 | INFO     | intersect: -7207905844.430502
[2025-11-28 00:14:40] 2025-11-27 23:14:02,094 | INFO     | chi2: 20.438820195541894
[2025-11-28 00:14:40] 2025-11-27 23:14:02,094 | INFO     | current chi2=20.438820195541894 (change=14.32731211712098 %)
[2025-11-28 00:14:40] 2025-11-27 23:14:02,094 | INFO     | right removable region: 1367
[2025-11-28 00:14:40] 2025-11-27 23:14:02,096 | INFO     | sum of square deviations: 793844905028.0791
[2025-11-28 00:14:40] 2025-11-27 23:14:02,218 | INFO     | sum of deviations: 2204875981078.829
[2025-11-28 00:14:40] 2025-11-27 23:14:02,218 | INFO     | mean x: 1764243429.6008773
[2025-11-28 00:14:40] 2025-11-27 23:14:02,218 | INFO     | mean y: 2851813.3092105263
[2025-11-28 00:14:40] 2025-11-27 23:14:02,218 | INFO     | intersect: -4897271545.882118
[2025-11-28 00:14:40] 2025-11-27 23:14:02,220 | INFO     | chi2: 19.254615425055537
[2025-11-28 00:14:40] 2025-11-27 23:14:02,220 | INFO     | current chi2=19.254615425055537 (change=19.29110184278348 %)
[2025-11-28 00:14:40] 2025-11-27 23:14:02,220 | INFO     | left removable region: 10
[2025-11-28 00:14:40] 2025-11-27 23:14:02,222 | INFO     | sum of square deviations: 774848756056.6398
[2025-11-28 00:14:40] 2025-11-27 23:14:02,302 | INFO     | sum of deviations: 2286393928352.5024
[2025-11-28 00:14:40] 2025-11-27 23:14:02,302 | INFO     | mean x: 1764243399.109801
[2025-11-28 00:14:40] 2025-11-27 23:14:02,302 | INFO     | mean y: 2870378.781871776
[2025-11-28 00:14:40] 2025-11-27 23:14:02,302 | INFO     | intersect: -5202991235.282294
[2025-11-28 00:14:40] 2025-11-27 23:14:02,304 | INFO     | chi2: 11.845437793812778
[2025-11-28 00:14:40] 2025-11-27 23:14:02,304 | INFO     | current memory leak: 2.95 B/s (using 1357 data points, chi2=11.85)
[2025-11-28 00:14:40] 2025-11-27 23:14:02,306 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 00:14:40] 2025-11-27 23:14:02,306 | INFO     | ..............................
[2025-11-28 00:14:40] 2025-11-27 23:14:02,306 | INFO     | . Timing measurements:
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . get job = 0 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . initial setup = 15 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . payload setup = 156 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . stage-in = 0 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . payload execution = 83861 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . stage-out = 5 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | . log creation = 2 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,307 | INFO     | ..............................
[2025-11-28 00:14:40] 2025-11-27 23:14:02,454 | INFO     | 
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | job summary report
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | --------------------------------------------------
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | PanDA job id: 6895355350
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | task id: 47556137
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | errors: (none)
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | pilot state: finished 
[2025-11-28 00:14:40] 2025-11-27 23:14:02,455 | INFO     | transexitcode: 0
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | exeerrorcode: 0
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | exeerrordiag: 
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | exitcode: 0
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | exitmsg: OK
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | cpuconsumptiontime: 316406 s
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | nevents: 1000
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | neventsw: 0
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | pid: 22070
[2025-11-28 00:14:40] 2025-11-27 23:14:02,456 | INFO     | pgrp: 22070
[2025-11-28 00:14:40] 2025-11-27 23:14:02,457 | INFO     | corecount: 8
[2025-11-28 00:14:40] 2025-11-27 23:14:02,457 | INFO     | event service: False
[2025-11-28 00:14:40] 2025-11-27 23:14:02,457 | INFO     | sizes: {0: 2283486, 1: 2284171, 2: 2284370, 13: 2284370, 23: 2284426, 34: 2284454, 45: 2284610, 56: 2284638, 66: 2284666, 77: 2284694, 88: 2284750, 93: 2285320, 99
[2025-11-28 00:14:40] 2025-11-27 23:14:02,457 | INFO     | --------------------------------------------------
[2025-11-28 00:14:40] 2025-11-27 23:14:02,457 | INFO     | 
[2025-11-28 00:14:40] 2025-11-27 23:14:02,457 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-11-28 00:14:40] 2025-11-27 23:14:02,995 | INFO     | time since job start (84312s) is within the limit (172800.0s)
[2025-11-28 00:14:40] 2025-11-27 23:14:03,020 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,020 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,020 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,020 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:14:40] 2025-11-27 23:14:03,022 | INFO     | job 6895355350 has completed (purged errors)
[2025-11-28 00:14:40] 2025-11-27 23:14:03,023 | INFO     | overall cleanup function is called
[2025-11-28 00:14:40] 2025-11-27 23:14:04,046 | INFO     | --- collectZombieJob: --- 10, [22070]
[2025-11-28 00:14:40] 2025-11-27 23:14:04,047 | INFO     | zombie collector waiting for pid 22070
[2025-11-28 00:14:40] 2025-11-27 23:14:04,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:14:40] 2025-11-27 23:14:04,047 | INFO     | collected zombie processes
[2025-11-28 00:14:40] 2025-11-27 23:14:04,047 | INFO     | will attempt to kill all subprocesses of pid=22070
[2025-11-28 00:14:40] 2025-11-27 23:14:04,178 | INFO     | process IDs to be killed: [22070] (in reverse order)
[2025-11-28 00:14:40] 2025-11-27 23:14:04,858 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:14:40] 2025-11-27 23:14:04,858 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:14:40] 2025-11-27 23:14:04,862 | INFO     | did not find any defunct processes belonging to 22070
[2025-11-28 00:14:40] 2025-11-27 23:14:04,864 | INFO     | did not find any defunct processes belonging to 22070
[2025-11-28 00:14:40] 2025-11-27 23:14:04,943 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:14:40] 2025-11-27 23:14:04,943 | INFO     | ready for new job
[2025-11-28 00:14:40] 2025-11-27 23:14:04,943 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:14:40] 2025-11-27 23:14:04,948 | INFO     | ***************************************
[2025-11-28 00:14:40] 2025-11-27 23:14:04,948 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:14:40] 2025-11-27 23:14:04,948 | INFO     | ***************************************
[2025-11-28 00:14:40] 2025-11-27 23:14:04,949 | INFO     | 
[2025-11-28 00:14:40] 2025-11-27 23:14:04,949 | INFO     | pilot is running in a VM
[2025-11-28 00:14:40] 2025-11-27 23:14:04,949 | INFO     | architecture information:
[2025-11-28 00:14:40] 2025-11-27 23:14:04,956 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:14:40] 2025-11-27 23:14:05,211 | INFO     | cat /etc/os-release:
[2025-11-28 00:14:40] NAME="CentOS Linux"
[2025-11-28 00:14:40] VERSION="7 (Core)"
[2025-11-28 00:14:40] ID="centos"
[2025-11-28 00:14:40] ID_LIKE="rhel fedora"
[2025-11-28 00:14:40] VERSION_ID="7"
[2025-11-28 00:14:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:14:40] ANSI_COLOR="0;31"
[2025-11-28 00:14:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:14:40] HOME_URL="https://www.centos.org/"
[2025-11-28 00:14:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:14:40] 
[2025-11-28 00:14:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:14:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:14:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:14:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:14:40] 
[2025-11-28 00:14:40] 2025-11-27 23:14:05,211 | INFO     | ***************************************
[2025-11-28 00:14:40] 2025-11-27 23:14:05,714 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-11-28 00:14:40] 2025-11-27 23:14:05,945 | INFO     | sufficient remaining disk space (494771634176 B)
[2025-11-28 00:14:40] 2025-11-27 23:14:05,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:14:40] 2025-11-27 23:14:05,945 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:14:40] 2025-11-27 23:14:05,946 | INFO     | update_server=False
[2025-11-28 00:14:40] 2025-11-27 23:14:05,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:14:40] 2025-11-27 23:14:06,111 | INFO     | all data control threads have been joined
[2025-11-28 00:14:40] 2025-11-27 23:14:06,196 | INFO     | all payload control threads have been joined
[2025-11-28 00:14:40] 2025-11-27 23:14:06,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:14:40] 2025-11-27 23:14:06,434 | INFO     | aborting loop
[2025-11-28 00:14:40] 2025-11-27 23:14:06,951 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:06,975 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,092 | INFO     | [job] validate thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,117 | INFO     | [data] control thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,202 | INFO     | [payload] control thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,225 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:14:40] 2025-11-27 23:14:07,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:14:40] 2025-11-27 23:14:07,414 | INFO     | all job control threads have been joined
[2025-11-28 00:14:40] 2025-11-27 23:14:07,439 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,470 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:14:40] 2025-11-27 23:14:07,660 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:07,762 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:08,089 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:08,238 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:08,359 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:08,420 | INFO     | [job] control thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:08,476 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:09,236 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:11,314 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:14:40] 2025-11-27 23:14:15,799 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:14:40] 2025-11-27 23:14:16,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740876433216)>', '<ExcThread(monitor, started 139740284172032)>']
[2025-11-28 00:14:40] 2025-11-27 23:14:21,335 | INFO     | all workflow threads have been joined
[2025-11-28 00:14:40] 2025-11-27 23:14:21,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:14:40] 2025-11-27 23:14:21,336 | INFO     | traces error code: 0
[2025-11-28 00:14:40] 2025-11-27 23:14:21,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:14:40] 2025-11-27 23:14:36,165 | INFO     | PID=15237 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 00:14:40] 2025-11-27 23:14:36,166 | INFO     | .. there are 9 such processes running
[2025-11-28 00:14:40] 2025-11-27 23:14:36,169 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:14:40] 2025-11-27 23:14:36,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:14:40] 2025-11-27 23:14:36,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:14:40] 2025-11-27 23:14:36,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:14:40] 2025-11-27 23:14:36,170 | INFO     | [monitor] control thread has ended
[2025-11-28 00:14:40] 2025-11-27 23:14:36,520 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:14:40] 2025-11-27 23:14:36,597 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:14:40] 2025-11-27 23:14:36,686 [wrapper] pilotpid: 15237
[2025-11-28 00:14:40] 2025-11-27 23:14:36,777 [wrapper] Pilot exit status: 0
[2025-11-28 00:14:40] 2025-11-27 23:14:37,070 [wrapper] pandaids: 6895355350
[2025-11-28 00:14:40] 2025-11-27 23:14:38,026 [wrapper] cleanup supervisor_pilot 24961 15238
[2025-11-28 00:14:40] 2025-11-27 23:14:38,065 [wrapper] Test setup, not cleaning
[2025-11-28 00:14:40] 2025-11-27 23:14:38,128 [wrapper] apfmon messages muted
[2025-11-28 00:14:40] 2025-11-27 23:14:38,178 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:14:40] 2025-11-27 23:14:38,262 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:14:40]  *** Error codes and diagnostics ***
[2025-11-28 00:14:40]     "exeErrorCode": 0,
[2025-11-28 00:14:40]     "exeErrorDiag": "",
[2025-11-28 00:14:40]     "pilotErrorCode": 0,
[2025-11-28 00:14:40]     "pilotErrorDiag": "",
[2025-11-28 00:14:40]  *** Listing of results directory ***
[2025-11-28 00:14:40] total 1332120
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc    576529 Nov 23 07:48 pilot3.tar.gz
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc      5112 Nov 23 08:19 queuedata.json
[2025-11-28 00:14:40] -rwx------. 1 boinc boinc     36292 Nov 23 08:19 runpilot2-wrapper.sh
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc       100 Nov 27 00:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:14:40] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 00:44 run_atlas
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc       105 Nov 27 00:44 job.xml
[2025-11-28 00:14:40] -rw-r--r--. 2 boinc boinc 410742205 Nov 27 00:44 EVNT.47483658._000656.pool.root.1
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc      6391 Nov 27 00:44 init_data.xml
[2025-11-28 00:14:40] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:44 start_atlas.sh
[2025-11-28 00:14:40] drwxrwx--x. 2 boinc boinc        68 Nov 27 00:44 shared
[2025-11-28 00:14:40] -rw-r--r--. 2 boinc boinc    590106 Nov 27 00:44 input.tar.gz
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc         0 Nov 27 00:44 boinc_lockfile
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc      2785 Nov 27 00:44 pandaJob.out
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc    991538 Nov 27 00:48 agis_schedconf.cvmfs.json
[2025-11-28 00:14:40] drwx------. 5 boinc boinc      4096 Nov 27 00:48 pilot3
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc       533 Nov 27 23:46 boinc_task_state.xml
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc 922029391 Nov 28 00:10 HITS.47556137._006516.pool.root.1
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc      1029 Nov 28 00:12 memory_monitor_summary.json
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc   1516240 Nov 28 00:12 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc   2462052 Nov 28 00:12 log.47556137._006516.job.log.tgz.1
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc      7950 Nov 28 00:14 heartbeat.json
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc        29 Nov 28 00:14 wrapper_checkpoint.txt
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc      8192 Nov 28 00:14 boinc_mmap_file
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc        95 Nov 28 00:14 pilot_heartbeat.json
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc       820 Nov 28 00:14 pilotlog.txt
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc  11246825 Nov 28 00:14 log.47556137._006516.job.log.1
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc       353 Nov 28 00:14 output.list
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc       620 Nov 28 00:14 runtime_log
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc  13731840 Nov 28 00:14 result.tar.gz
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc       662 Nov 28 00:14 XmmNDm5YJh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsiKKDm9JSFvm.diag
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc      8817 Nov 28 00:14 runtime_log.err
[2025-11-28 00:14:40] -rw-r--r--. 1 boinc boinc     21444 Nov 28 00:14 stderr.txt
[2025-11-28 00:14:40] HITS file was successfully produced:
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc 922029391 Nov 28 00:10 shared/HITS.pool.root.1
[2025-11-28 00:14:40]  *** Contents of shared directory: ***
[2025-11-28 00:14:40] total 1315544
[2025-11-28 00:14:40] -rw-r--r--. 2 boinc boinc 410742205 Nov 27 00:44 ATLAS.root_0
[2025-11-28 00:14:40] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:44 start_atlas.sh
[2025-11-28 00:14:40] -rw-r--r--. 2 boinc boinc    590106 Nov 27 00:44 input.tar.gz
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc 922029391 Nov 28 00:10 HITS.pool.root.1
[2025-11-28 00:14:40] -rw-------. 1 boinc boinc  13731840 Nov 28 00:14 result.tar.gz
00:14:42 (11381): run_atlas exited; CPU time 316997.390590
00:14:42 (11381): called boinc_finish(0)

</stderr_txt>
]]>

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