Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:30:05 (7058): wrapper (7.7.26015): starting
08:30:05 (7058): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 08:30:05] Arguments: --nthreads 8
[2025-11-24 08:30:05] Threads: 8
[2025-11-24 08:30:05] Checking for CVMFS
[2025-11-24 08:30:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:30:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:30:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:30:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:30:05] 2.11.2.0 2466 114851 132216 153247 1 82 11331235 18432000 1885 130560 0 81007520 99.972 4971374 28169 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:30:05] CVMFS is ok
[2025-11-24 08:30:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:30:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:30:05] Further information can be found at the LHC@home message board.
[2025-11-24 08:30:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:30:05] Checking for apptainer binary...
[2025-11-24 08:30:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:30:05] Running /usr/bin/apptainer --version
[2025-11-24 08:30:06] apptainer version 1.3.2-1.el7
[2025-11-24 08:30:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:30:06] c-206-20.aglt2.org
[2025-11-24 08:30:06] apptainer works
[2025-11-24 08:30:06] Set ATHENA_PROC_NUMBER=8
[2025-11-24 08:30:06] Set ATHENA_CORE_NUMBER=8
[2025-11-24 08:30:06] Starting ATLAS job with PandaID=6895355227
[2025-11-24 08:30:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:04:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:04:25] 2025-11-25 09:03:52,357 | INFO     | time since job start (70414s) is within the limit (172800.0s)
[2025-11-25 04:04:25] 2025-11-25 09:03:52,545 | INFO     | monitor loop #5040: job 0:6895355227 is in state 'finished'
[2025-11-25 04:04:25] 2025-11-25 09:03:52,545 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,080 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 04:04:25] 2025-11-25 09:03:53,083 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2439.125
[2025-11-25 04:04:25] 2025-11-25 09:03:53,086 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895355227/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,086 | INFO     | extracted standard info from prmon json
[2025-11-25 04:04:25] 2025-11-25 09:03:53,087 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:04:25] 2025-11-25 09:03:53,087 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:04:25] 2025-11-25 09:03:53,103 | INFO     | fitting pss+swap vs Time
[2025-11-25 04:04:25] 2025-11-25 09:03:53,105 | INFO     | sum of square deviations: 476536709808.36707
[2025-11-25 04:04:25] 2025-11-25 09:03:53,151 | INFO     | sum of deviations: 2052476373861.2415
[2025-11-25 04:04:25] 2025-11-25 09:03:53,151 | INFO     | mean x: 1764026210.136915
[2025-11-25 04:04:25] 2025-11-25 09:03:53,151 | INFO     | mean y: 2871645.327556326
[2025-11-25 04:04:25] 2025-11-25 09:03:53,151 | INFO     | intersect: -7594910528.9649315
[2025-11-25 04:04:25] 2025-11-25 09:03:53,153 | INFO     | chi2: 5.545378756464031
[2025-11-25 04:04:25] 2025-11-25 09:03:53,155 | INFO     | sum of square deviations: 470369590438.83374
[2025-11-25 04:04:25] 2025-11-25 09:03:53,201 | INFO     | sum of deviations: 2391358344509.273
[2025-11-25 04:04:25] 2025-11-25 09:03:53,202 | INFO     | mean x: 1764026057.6396866
[2025-11-25 04:04:25] 2025-11-25 09:03:53,202 | INFO     | mean y: 2880023.0948651
[2025-11-25 04:04:25] 2025-11-25 09:03:53,202 | INFO     | intersect: -8965426003.944138
[2025-11-25 04:04:25] 2025-11-25 09:03:53,204 | INFO     | chi2: 3.036318296750908
[2025-11-25 04:04:25] 2025-11-25 09:03:53,204 | INFO     | current chi2=3.036318296750908 (change=45.24597092287717 %)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,206 | INFO     | sum of square deviations: 464255913931.775
[2025-11-25 04:04:25] 2025-11-25 09:03:53,253 | INFO     | sum of deviations: 2551910543266.413
[2025-11-25 04:04:25] 2025-11-25 09:03:53,254 | INFO     | mean x: 1764025905.1424825
[2025-11-25 04:04:25] 2025-11-25 09:03:53,254 | INFO     | mean y: 2884025.6232517483
[2025-11-25 04:04:25] 2025-11-25 09:03:53,254 | INFO     | intersect: -9693570388.503435
[2025-11-25 04:04:25] 2025-11-25 09:03:53,256 | INFO     | chi2: 2.3667760756817593
[2025-11-25 04:04:25] 2025-11-25 09:03:53,256 | INFO     | current chi2=2.3667760756817593 (change=22.051120983778606 %)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,256 | INFO     | right removable region: 1143
[2025-11-25 04:04:25] 2025-11-25 09:03:53,258 | INFO     | sum of square deviations: 470369142088.8337
[2025-11-25 04:04:25] 2025-11-25 09:03:53,303 | INFO     | sum of deviations: 1752803519050.9392
[2025-11-25 04:04:25] 2025-11-25 09:03:53,303 | INFO     | mean x: 1764026362.6396866
[2025-11-25 04:04:25] 2025-11-25 09:03:53,304 | INFO     | mean y: 2879046.825935596
[2025-11-25 04:04:25] 2025-11-25 09:03:53,304 | INFO     | intersect: -6570663601.831741
[2025-11-25 04:04:25] 2025-11-25 09:03:53,305 | INFO     | chi2: 3.498857081003232
[2025-11-25 04:04:25] 2025-11-25 09:03:53,306 | INFO     | current chi2=3.498857081003232 (change=36.90499360526545 %)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,307 | INFO     | sum of square deviations: 464255227865.621
[2025-11-25 04:04:25] 2025-11-25 09:03:53,353 | INFO     | sum of deviations: 1675803816789.76
[2025-11-25 04:04:25] 2025-11-25 09:03:53,354 | INFO     | mean x: 1764026515.1398602
[2025-11-25 04:04:25] 2025-11-25 09:03:53,354 | INFO     | mean y: 2880967.138986014
[2025-11-25 04:04:25] 2025-11-25 09:03:53,354 | INFO     | intersect: -6364656089.105819
[2025-11-25 04:04:25] 2025-11-25 09:03:53,356 | INFO     | chi2: 3.440750421427932
[2025-11-25 04:04:25] 2025-11-25 09:03:53,356 | INFO     | current chi2=3.440750421427932 (change=1.6607325829564523 %)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,356 | INFO     | left removable region: 20
[2025-11-25 04:04:25] 2025-11-25 09:03:53,358 | INFO     | sum of square deviations: 439155583112.36206
[2025-11-25 04:04:25] 2025-11-25 09:03:53,401 | INFO     | sum of deviations: 2088518125834.003
[2025-11-25 04:04:25] 2025-11-25 09:03:53,402 | INFO     | mean x: 1764026484.6473732
[2025-11-25 04:04:25] 2025-11-25 09:03:53,402 | INFO     | mean y: 2896481.323241318
[2025-11-25 04:04:25] 2025-11-25 09:03:53,402 | INFO     | intersect: -8386388385.617956
[2025-11-25 04:04:25] 2025-11-25 09:03:53,404 | INFO     | chi2: 0.19172632975309414
[2025-11-25 04:04:25] 2025-11-25 09:03:53,404 | INFO     | current memory leak: 4.76 B/s (using 1123 data points, chi2=0.19)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,405 | INFO     | could have reported an average CPU frequency of 2624 MHz (42 samples)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,405 | INFO     | ..............................
[2025-11-25 04:04:25] 2025-11-25 09:03:53,406 | INFO     | . Timing measurements:
[2025-11-25 04:04:25] 2025-11-25 09:03:53,406 | INFO     | . get job = 0 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,406 | INFO     | . initial setup = 2 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,406 | INFO     | . payload setup = 5 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,406 | INFO     | . stage-in = 0 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,406 | INFO     | . payload execution = 70378 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,407 | INFO     | . stage-out = 4 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,407 | INFO     | . log creation = 0 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,407 | INFO     | ..............................
[2025-11-25 04:04:25] 2025-11-25 09:03:53,791 | INFO     | 
[2025-11-25 04:04:25] 2025-11-25 09:03:53,791 | INFO     | job summary report
[2025-11-25 04:04:25] 2025-11-25 09:03:53,791 | INFO     | --------------------------------------------------
[2025-11-25 04:04:25] 2025-11-25 09:03:53,791 | INFO     | PanDA job id: 6895355227
[2025-11-25 04:04:25] 2025-11-25 09:03:53,791 | INFO     | task id: 47556137
[2025-11-25 04:04:25] 2025-11-25 09:03:53,792 | INFO     | errors: (none)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,792 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:04:25] 2025-11-25 09:03:53,792 | INFO     | pilot state: finished 
[2025-11-25 04:04:25] 2025-11-25 09:03:53,792 | INFO     | transexitcode: 0
[2025-11-25 04:04:25] 2025-11-25 09:03:53,792 | INFO     | exeerrorcode: 0
[2025-11-25 04:04:25] 2025-11-25 09:03:53,792 | INFO     | exeerrordiag: 
[2025-11-25 04:04:25] 2025-11-25 09:03:53,793 | INFO     | exitcode: 0
[2025-11-25 04:04:25] 2025-11-25 09:03:53,793 | INFO     | exitmsg: OK
[2025-11-25 04:04:25] 2025-11-25 09:03:53,793 | INFO     | cpuconsumptiontime: 543477 s
[2025-11-25 04:04:25] 2025-11-25 09:03:53,793 | INFO     | nevents: 1000
[2025-11-25 04:04:25] 2025-11-25 09:03:53,793 | INFO     | neventsw: 0
[2025-11-25 04:04:25] 2025-11-25 09:03:53,794 | INFO     | pid: 17289
[2025-11-25 04:04:25] 2025-11-25 09:03:53,794 | INFO     | pgrp: 17289
[2025-11-25 04:04:25] 2025-11-25 09:03:53,794 | INFO     | corecount: 8
[2025-11-25 04:04:25] 2025-11-25 09:03:53,794 | INFO     | event service: False
[2025-11-25 04:04:25] 2025-11-25 09:03:53,794 | INFO     | sizes: {0: 2284310, 4: 2284572, 11: 2284600, 70386: 2341315, 70387: 2341314, 70392: 2350369, 70396: 2350553, 70400: 2350799}
[2025-11-25 04:04:25] 2025-11-25 09:03:53,794 | INFO     | --------------------------------------------------
[2025-11-25 04:04:25] 2025-11-25 09:03:53,795 | INFO     | 
[2025-11-25 04:04:25] 2025-11-25 09:03:53,795 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 04:04:25] 2025-11-25 09:03:53,816 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,816 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,816 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,817 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,817 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,817 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:04:25] 2025-11-25 09:03:53,820 | INFO     | job 6895355227 has completed (purged errors)
[2025-11-25 04:04:25] 2025-11-25 09:03:53,820 | INFO     | overall cleanup function is called
[2025-11-25 04:04:25] 2025-11-25 09:03:54,834 | INFO     | --- collectZombieJob: --- 10, [17289]
[2025-11-25 04:04:25] 2025-11-25 09:03:54,834 | INFO     | zombie collector waiting for pid 17289
[2025-11-25 04:04:25] 2025-11-25 09:03:54,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:04:25] 2025-11-25 09:03:54,834 | INFO     | collected zombie processes
[2025-11-25 04:04:25] 2025-11-25 09:03:54,834 | INFO     | will attempt to kill all subprocesses of pid=17289
[2025-11-25 04:04:25] 2025-11-25 09:03:55,008 | INFO     | process IDs to be killed: [17289] (in reverse order)
[2025-11-25 04:04:25] 2025-11-25 09:03:55,061 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:04:25] 2025-11-25 09:03:55,061 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:04:25] 2025-11-25 09:03:55,067 | INFO     | did not find any defunct processes belonging to 17289
[2025-11-25 04:04:25] 2025-11-25 09:03:55,073 | INFO     | did not find any defunct processes belonging to 17289
[2025-11-25 04:04:25] 2025-11-25 09:03:55,075 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:04:25] 2025-11-25 09:03:55,075 | INFO     | ready for new job
[2025-11-25 04:04:25] 2025-11-25 09:03:55,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:04:25] 2025-11-25 09:03:55,080 | INFO     | ***************************************
[2025-11-25 04:04:25] 2025-11-25 09:03:55,080 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:04:25] 2025-11-25 09:03:55,080 | INFO     | ***************************************
[2025-11-25 04:04:25] 2025-11-25 09:03:55,081 | INFO     | 
[2025-11-25 04:04:25] 2025-11-25 09:03:55,082 | INFO     | architecture information:
[2025-11-25 04:04:25] 2025-11-25 09:03:55,082 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:04:25] 2025-11-25 09:03:55,097 | INFO     | cat /etc/os-release:
[2025-11-25 04:04:25] NAME="CentOS Linux"
[2025-11-25 04:04:25] VERSION="7 (Core)"
[2025-11-25 04:04:25] ID="centos"
[2025-11-25 04:04:25] ID_LIKE="rhel fedora"
[2025-11-25 04:04:25] VERSION_ID="7"
[2025-11-25 04:04:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:04:25] ANSI_COLOR="0;31"
[2025-11-25 04:04:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:04:25] HOME_URL="https://www.centos.org/"
[2025-11-25 04:04:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:04:25] 
[2025-11-25 04:04:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:04:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:04:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:04:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:04:25] 
[2025-11-25 04:04:25] 2025-11-25 09:03:55,097 | INFO     | ***************************************
[2025-11-25 04:04:25] 2025-11-25 09:03:55,600 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 04:04:25] 2025-11-25 09:03:55,615 | INFO     | sufficient remaining disk space (24726470656 B)
[2025-11-25 04:04:25] 2025-11-25 09:03:55,615 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:04:25] 2025-11-25 09:03:55,616 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:04:25] 2025-11-25 09:03:55,616 | INFO     | update_server=False
[2025-11-25 04:04:25] 2025-11-25 09:03:55,616 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:04:25] 2025-11-25 09:03:55,632 | INFO     | all job control threads have been joined
[2025-11-25 04:04:25] 2025-11-25 09:03:55,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:04:25] 2025-11-25 09:03:56,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:04:25] 2025-11-25 09:03:56,058 | INFO     | aborting loop
[2025-11-25 04:04:25] 2025-11-25 09:03:56,173 | INFO     | all payload control threads have been joined
[2025-11-25 04:04:25] 2025-11-25 09:03:56,572 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:04:25] 2025-11-25 09:03:56,621 | INFO     | all data control threads have been joined
[2025-11-25 04:04:25] 2025-11-25 09:03:56,622 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:56,637 | INFO     | [job] control thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:56,727 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:56,744 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:56,787 | INFO     | [job] validate thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:56,795 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,063 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,179 | INFO     | [payload] control thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,573 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,598 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,628 | INFO     | [data] control thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,730 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:57,913 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:58,577 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:58,578 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:04:25] 2025-11-25 09:03:59,583 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:03:59,688 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:04:25] 2025-11-25 09:04:14,577 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:04:25] 2025-11-25 09:04:16,417 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668904732480)>', '<ExcThread(monitor, started 139668603512576)>']
[2025-11-25 04:04:25] 2025-11-25 09:04:21,442 | INFO     | all workflow threads have been joined
[2025-11-25 04:04:25] 2025-11-25 09:04:21,442 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:04:25] 2025-11-25 09:04:21,442 | INFO     | traces error code: 0
[2025-11-25 04:04:25] 2025-11-25 09:04:21,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:04:25] 2025-11-25 09:04:25,634 | INFO     | PID=10767 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 04:04:25] 2025-11-25 09:04:25,634 | INFO     | .. there are 3 such processes running
[2025-11-25 04:04:25] 2025-11-25 09:04:25,634 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:04:25] 2025-11-25 09:04:25,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:04:25] 2025-11-25 09:04:25,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:04:25] 2025-11-25 09:04:25,635 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:04:25] 2025-11-25 09:04:25,635 | INFO     | [monitor] control thread has ended
[2025-11-25 04:04:25] 2025-11-25 09:04:25,760 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:04:25] 2025-11-25 09:04:25,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:04:25] 2025-11-25 09:04:25,764 [wrapper] pilotpid: 10767
[2025-11-25 04:04:25] 2025-11-25 09:04:25,769 [wrapper] Pilot exit status: 0
[2025-11-25 04:04:25] 2025-11-25 09:04:25,778 [wrapper] pandaids: 6895355227
[2025-11-25 04:04:25] 2025-11-25 09:04:25,809 [wrapper] cleanup supervisor_pilot 21596 10768
[2025-11-25 04:04:25] 2025-11-25 09:04:25,812 [wrapper] Test setup, not cleaning
[2025-11-25 04:04:25] 2025-11-25 09:04:25,814 [wrapper] apfmon messages muted
[2025-11-25 04:04:25] 2025-11-25 09:04:25,816 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:04:25] 2025-11-25 09:04:25,818 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:04:25]  *** Error codes and diagnostics ***
[2025-11-25 04:04:25]     "exeErrorCode": 0,
[2025-11-25 04:04:25]     "exeErrorDiag": "",
[2025-11-25 04:04:25]     "pilotErrorCode": 0,
[2025-11-25 04:04:25]     "pilotErrorDiag": "",
[2025-11-25 04:04:25]  *** Listing of results directory ***
[2025-11-25 04:04:25] total 1345376
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 01:48 pilot3.tar.gz
[2025-11-25 04:04:25] -rwx------ 1 boincer umatlas     36292 Nov 23 02:01 runpilot2-wrapper.sh
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 02:01 queuedata.json
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas       100 Nov 24 08:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:04:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 08:30 run_atlas
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas       105 Nov 24 08:30 job.xml
[2025-11-25 04:04:25] -rw-r--r-- 2 boincer umatlas 412151785 Nov 24 08:30 EVNT.47483658._000652.pool.root.1
[2025-11-25 04:04:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:30 start_atlas.sh
[2025-11-25 04:04:25] drwxrwx--x 2 boincer umatlas      4096 Nov 24 08:30 shared
[2025-11-25 04:04:25] -rw-r--r-- 2 boincer umatlas    590095 Nov 24 08:30 input.tar.gz
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas         0 Nov 24 08:30 boinc_lockfile
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 08:30 pandaJob.out
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas        57 Nov 24 08:30 setup.sh.local
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas    988280 Nov 24 08:30 agis_schedconf.cvmfs.json
[2025-11-25 04:04:25] drwx------ 5 boincer umatlas      4096 Nov 24 08:30 pilot3
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas       533 Nov 25 03:51 boinc_task_state.xml
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 04:00 init_data.xml
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas 937473927 Nov 25 04:03 HITS.47556137._006472.pool.root.1
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas        95 Nov 25 04:03 pilot_heartbeat.json
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas      1068 Nov 25 04:03 memory_monitor_summary.json
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas   1516240 Nov 25 04:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas   2318029 Nov 25 04:03 log.47556137._006472.job.log.tgz.1
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas      8678 Nov 25 04:03 heartbeat.json
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas        29 Nov 25 04:04 wrapper_checkpoint.txt
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 04:04 boinc_mmap_file
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas       820 Nov 25 04:04 pilotlog.txt
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas   9747563 Nov 25 04:04 log.47556137._006472.job.log.1
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas       353 Nov 25 04:04 output.list
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas       620 Nov 25 04:04 runtime_log
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas  12083200 Nov 25 04:04 result.tar.gz
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 04:04 runtime_log.err
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas       668 Nov 25 04:04 atxKDmRHJh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmAiKKDmiu7TIn.diag
[2025-11-25 04:04:25] -rw-r--r-- 1 boincer umatlas     21293 Nov 25 04:04 stderr.txt
[2025-11-25 04:04:25] HITS file was successfully produced:
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas 937473927 Nov 25 04:03 shared/HITS.pool.root.1
[2025-11-25 04:04:25]  *** Contents of shared directory: ***
[2025-11-25 04:04:25] total 1330400
[2025-11-25 04:04:25] -rw-r--r-- 2 boincer umatlas 412151785 Nov 24 08:30 ATLAS.root_0
[2025-11-25 04:04:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:30 start_atlas.sh
[2025-11-25 04:04:25] -rw-r--r-- 2 boincer umatlas    590095 Nov 24 08:30 input.tar.gz
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas 937473927 Nov 25 04:03 HITS.pool.root.1
[2025-11-25 04:04:25] -rw------- 1 boincer umatlas  12083200 Nov 25 04:04 result.tar.gz
04:04:27 (7058): run_atlas exited; CPU time 542420.663258
04:04:27 (7058): called boinc_finish(0)

</stderr_txt>
]]>

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