Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:01:29 (1581761): wrapper (7.7.26015): starting
03:01:29 (1581761): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 03:01:29] Arguments: --nthreads 3
[2025-11-27 03:01:29] Threads: 3
[2025-11-27 03:01:29] Checking for CVMFS
[2025-11-27 03:01:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:01:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:01:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:01:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:01:29] 2.9.2.0 1300652 1978 69940 153342 1 81 29313755 36864001 0 130560 0 730388 99.980 76629 967 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 03:01:29] CVMFS is ok
[2025-11-27 03:01:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:01:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:01:29] Further information can be found at the LHC@home message board.
[2025-11-27 03:01:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:01:29] Checking for apptainer binary...
[2025-11-27 03:01:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:01:29] Running /usr/bin/apptainer --version
[2025-11-27 03:01:29] apptainer version 1.4.1-1.1
[2025-11-27 03:01:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:01:29] thA305
[2025-11-27 03:01:29] apptainer works
[2025-11-27 03:01:29] Set ATHENA_PROC_NUMBER=3
[2025-11-27 03:01:29] Set ATHENA_CORE_NUMBER=3
[2025-11-27 03:01:29] Starting ATLAS job with PandaID=6895365181
[2025-11-27 03:01:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:15:25]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:15:25] ANSI_COLOR="0;31"
[2025-11-27 11:15:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:15:25] HOME_URL="https://www.centos.org/"
[2025-11-27 11:15:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:15:25] 
[2025-11-27 11:15:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:15:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:15:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:15:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:15:25] 
[2025-11-27 11:15:25] 2025-11-27 10:14:55,552 | INFO     | ***************************************
[2025-11-27 11:15:25] 2025-11-27 10:14:56,055 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | INFO     | sufficient remaining disk space (227543089152 B)
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | INFO     | update_server=False
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | INFO     | aborting loop
[2025-11-27 11:15:25] 2025-11-27 10:14:56,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:15:25] 2025-11-27 10:14:56,069 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:15:25] 2025-11-27 10:14:56,367 | INFO     | all job control threads have been joined
[2025-11-27 11:15:25] 2025-11-27 10:14:56,758 | INFO     | all data control threads have been joined
[2025-11-27 11:15:25] 2025-11-27 10:14:57,074 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,074 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,074 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,159 | INFO     | all payload control threads have been joined
[2025-11-27 11:15:25] 2025-11-27 10:14:57,373 | INFO     | [job] control thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,411 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,448 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:15:25] 2025-11-27 10:14:57,561 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,672 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,764 | INFO     | [data] control thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,859 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,936 | INFO     | [job] validate thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:57,951 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:58,160 | INFO     | [payload] control thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:58,172 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:58,381 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:14:59,454 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:15:00,076 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:15:25] 2025-11-27 10:15:07,098 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:15:25] 2025-11-27 10:15:07,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140121144039232)>', '<ExcThread(monitor, started 140120799823616)>']
[2025-11-27 11:15:25] 2025-11-27 10:15:12,153 | INFO     | all workflow threads have been joined
[2025-11-27 11:15:25] 2025-11-27 10:15:12,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:15:25] 2025-11-27 10:15:12,154 | INFO     | traces error code: 0
[2025-11-27 11:15:25] 2025-11-27 10:15:12,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:15:25] 2025-11-27 10:15:25,614 | INFO     | PID=1585477 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:15:25] 2025-11-27 10:15:25,615 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:15:25] 2025-11-27 10:15:25,615 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:15:25] 2025-11-27 10:15:25,615 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:15:25] 2025-11-27 10:15:25,615 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:15:25] 2025-11-27 10:15:25,615 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 11:15:25] 2025-11-27 10:15:25,615 | INFO     | [monitor] control thread has ended
[2025-11-27 11:15:25] 2025-11-27 10:15:25,661 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:15:25] 2025-11-27 10:15:25,664 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:15:25] 2025-11-27 10:15:25,666 [wrapper] pilotpid: 1585477
[2025-11-27 11:15:25] 2025-11-27 10:15:25,668 [wrapper] Pilot exit status: 0
[2025-11-27 11:15:25] 2025-11-27 10:15:25,675 [wrapper] pandaids: 6895365181
[2025-11-27 11:15:25] 2025-11-27 10:15:25,692 [wrapper] cleanup supervisor_pilot 1646279 1585478
[2025-11-27 11:15:25] 2025-11-27 10:15:25,694 [wrapper] Test setup, not cleaning
[2025-11-27 11:15:25] 2025-11-27 10:15:25,697 [wrapper] apfmon messages muted
[2025-11-27 11:15:25] 2025-11-27 10:15:25,699 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:15:25] 2025-11-27 10:15:25,701 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:15:25]  *** Error codes and diagnostics ***
[2025-11-27 11:15:25]     "exeErrorCode": 0,
[2025-11-27 11:15:25]     "exeErrorDiag": "",
[2025-11-27 11:15:25]     "pilotErrorCode": 0,
[2025-11-27 11:15:25]     "pilotErrorDiag": "",
[2025-11-27 11:15:25]  *** Listing of results directory ***
[2025-11-27 11:15:25] total 1318072
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc    576529 Nov 23 17:55 pilot3.tar.gz
[2025-11-27 11:15:25] -rwx------ 1 boinc boinc     36292 Nov 23 18:04 runpilot2-wrapper.sh
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc      5112 Nov 23 18:04 queuedata.json
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc       100 Nov 27 03:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:15:25] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 03:01 run_atlas
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc       105 Nov 27 03:01 job.xml
[2025-11-27 11:15:25] -rw-r--r-- 2 boinc boinc 410381915 Nov 27 03:01 EVNT.47483658._000816.pool.root.1
[2025-11-27 11:15:25] -rw-r--r-- 2 boinc boinc    590099 Nov 27 03:01 input.tar.gz
[2025-11-27 11:15:25] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:01 start_atlas.sh
[2025-11-27 11:15:25] drwxrwx--x 2 boinc boinc      4096 Nov 27 03:01 shared
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:01 boinc_setup_complete
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc      6440 Nov 27 03:01 init_data.xml
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:01 boinc_lockfile
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc      2786 Nov 27 03:01 pandaJob.out
[2025-11-27 11:15:25] -rw------- 1 boinc boinc    991530 Nov 27 03:01 agis_schedconf.cvmfs.json
[2025-11-27 11:15:25] drwx------ 5 boinc boinc      4096 Nov 27 03:01 pilot3
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc       531 Nov 27 11:11 boinc_task_state.xml
[2025-11-27 11:15:25] -rw------- 1 boinc boinc 924735063 Nov 27 11:14 HITS.47556137._008027.pool.root.1
[2025-11-27 11:15:25] -rw------- 1 boinc boinc      1028 Nov 27 11:14 memory_monitor_summary.json
[2025-11-27 11:15:25] -rw------- 1 boinc boinc   1516240 Nov 27 11:14 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:15:25] -rw------- 1 boinc boinc   1177879 Nov 27 11:14 log.47556137._008027.job.log.tgz.1
[2025-11-27 11:15:25] -rw------- 1 boinc boinc      8563 Nov 27 11:14 heartbeat.json
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc      8192 Nov 27 11:15 boinc_mmap_file
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc        28 Nov 27 11:15 wrapper_checkpoint.txt
[2025-11-27 11:15:25] -rw------- 1 boinc boinc       817 Nov 27 11:15 pilotlog.txt
[2025-11-27 11:15:25] -rw------- 1 boinc boinc        95 Nov 27 11:15 pilot_heartbeat.json
[2025-11-27 11:15:25] -rw------- 1 boinc boinc   4163992 Nov 27 11:15 log.47556137._008027.job.log.1
[2025-11-27 11:15:25] -rw------- 1 boinc boinc       353 Nov 27 11:15 output.list
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc       620 Nov 27 11:15 runtime_log
[2025-11-27 11:15:25] -rw------- 1 boinc boinc   5365760 Nov 27 11:15 result.tar.gz
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc      8898 Nov 27 11:15 runtime_log.err
[2025-11-27 11:15:25] -rw------- 1 boinc boinc       665 Nov 27 11:15 ePjKDmbgSh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmReIKDmHXZY5m.diag
[2025-11-27 11:15:25] -rw-r--r-- 1 boinc boinc      8540 Nov 27 11:15 stderr.txt
[2025-11-27 11:15:25] HITS file was successfully produced:
[2025-11-27 11:15:25] -rw------- 1 boinc boinc 924735063 Nov 27 11:14 shared/HITS.pool.root.1
[2025-11-27 11:15:25]  *** Contents of shared directory: ***
[2025-11-27 11:15:25] total 1309672
[2025-11-27 11:15:25] -rw-r--r-- 2 boinc boinc 410381915 Nov 27 03:01 ATLAS.root_0
[2025-11-27 11:15:25] -rw-r--r-- 2 boinc boinc    590099 Nov 27 03:01 input.tar.gz
[2025-11-27 11:15:25] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:01 start_atlas.sh
[2025-11-27 11:15:25] -rw------- 1 boinc boinc 924735063 Nov 27 11:14 HITS.pool.root.1
[2025-11-27 11:15:25] -rw------- 1 boinc boinc   5365760 Nov 27 11:15 result.tar.gz
11:15:27 (1581761): run_atlas exited; CPU time 87469.708136
11:15:27 (1581761): called boinc_finish(0)

</stderr_txt>
]]>

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