Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:04 (13515): wrapper (7.7.26015): starting
08:10:04 (13515): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 08:10:04] Arguments: --nthreads 12
[2025-11-24 08:10:04] Threads: 12
[2025-11-24 08:10:04] Checking for CVMFS
[2025-11-24 08:10:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:10:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:10:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:10:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:10:05] 2.11.2.0 2987 284797 95900 153246 3 81 14252674 20275201 1 130560 1 127884833 99.967 16951996 14024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:10:05] CVMFS is ok
[2025-11-24 08:10:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:10:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:10:05] Further information can be found at the LHC@home message board.
[2025-11-24 08:10:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:10:05] Checking for apptainer binary...
[2025-11-24 08:10:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:10:05] Running /usr/bin/apptainer --version
[2025-11-24 08:10:05] apptainer version 1.3.2-1.el7
[2025-11-24 08:10:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:10:06] c-205-19.aglt2.org
[2025-11-24 08:10:06] apptainer works
[2025-11-24 08:10:06] Set ATHENA_PROC_NUMBER=12
[2025-11-24 08:10:06] Set ATHENA_CORE_NUMBER=12
[2025-11-24 08:10:06] Starting ATLAS job with PandaID=6895365517
[2025-11-24 08:10:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 15:25:10]  *** The last 200 lines of the pilot log: ***
[2025-11-24 15:25:10] 2025-11-24 20:24:25,475 | INFO     | monitor loop #1948: job 0:6895365517 is in state 'finished'
[2025-11-24 15:25:10] 2025-11-24 20:24:25,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,730 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 15:25:10] 2025-11-24 20:24:25,734 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-11-24 15:25:10] 2025-11-24 20:24:25,736 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895365517/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,737 | INFO     | extracted standard info from prmon json
[2025-11-24 15:25:10] 2025-11-24 20:24:25,737 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 15:25:10] 2025-11-24 20:24:25,737 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 15:25:10] 2025-11-24 20:24:25,744 | INFO     | fitting pss+swap vs Time
[2025-11-24 15:25:10] 2025-11-24 20:24:25,745 | INFO     | sum of square deviations: 24141228937.990635
[2025-11-24 15:25:10] 2025-11-24 20:24:25,749 | INFO     | sum of deviations: 426662831082.88513
[2025-11-24 15:25:10] 2025-11-24 20:24:25,749 | INFO     | mean x: 1764002844.2903981
[2025-11-24 15:25:10] 2025-11-24 20:24:25,749 | INFO     | mean y: 3424741.5573770492
[2025-11-24 15:25:10] 2025-11-24 20:24:25,749 | INFO     | intersect: -31172885690.543087
[2025-11-24 15:25:10] 2025-11-24 20:24:25,749 | INFO     | chi2: 5.964586198354146
[2025-11-24 15:25:10] 2025-11-24 20:24:25,750 | INFO     | sum of square deviations: 23303102205.063835
[2025-11-24 15:25:10] 2025-11-24 20:24:25,754 | INFO     | sum of deviations: 596969836407.6526
[2025-11-24 15:25:10] 2025-11-24 20:24:25,754 | INFO     | mean x: 1764002691.793839
[2025-11-24 15:25:10] 2025-11-24 20:24:25,754 | INFO     | mean y: 3455697.789099526
[2025-11-24 15:25:10] 2025-11-24 20:24:25,754 | INFO     | intersect: -45186081260.68481
[2025-11-24 15:25:10] 2025-11-24 20:24:25,755 | INFO     | chi2: 2.689707237831198
[2025-11-24 15:25:10] 2025-11-24 20:24:25,755 | INFO     | current chi2=2.689707237831198 (change=54.9053840721861 %)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,755 | INFO     | sum of square deviations: 22484578248.719486
[2025-11-24 15:25:10] 2025-11-24 20:24:25,759 | INFO     | sum of deviations: 621032772026.6768
[2025-11-24 15:25:10] 2025-11-24 20:24:25,759 | INFO     | mean x: 1764002539.294964
[2025-11-24 15:25:10] 2025-11-24 20:24:25,759 | INFO     | mean y: 3460143.4172661873
[2025-11-24 15:25:10] 2025-11-24 20:24:25,759 | INFO     | intersect: -48718974172.32704
[2025-11-24 15:25:10] 2025-11-24 20:24:25,760 | INFO     | chi2: 2.443342649252187
[2025-11-24 15:25:10] 2025-11-24 20:24:25,760 | INFO     | current chi2=2.443342649252187 (change=9.159531755495562 %)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,760 | INFO     | right removable region: 416
[2025-11-24 15:25:10] 2025-11-24 20:24:25,761 | INFO     | sum of square deviations: 23303026565.06383
[2025-11-24 15:25:10] 2025-11-24 20:24:25,764 | INFO     | sum of deviations: 292813037846.28644
[2025-11-24 15:25:10] 2025-11-24 20:24:25,765 | INFO     | mean x: 1764002996.793839
[2025-11-24 15:25:10] 2025-11-24 20:24:25,765 | INFO     | mean y: 3449012.1872037915
[2025-11-24 15:25:10] 2025-11-24 20:24:25,765 | INFO     | intersect: -22162044161.799667
[2025-11-24 15:25:10] 2025-11-24 20:24:25,765 | INFO     | chi2: 3.7682661840065417
[2025-11-24 15:25:10] 2025-11-24 20:24:25,765 | INFO     | current chi2=3.7682661840065417 (change=36.82267203974103 %)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,766 | INFO     | sum of square deviations: 22484478086.719475
[2025-11-24 15:25:10] 2025-11-24 20:24:25,770 | INFO     | sum of deviations: 251028387359.70505
[2025-11-24 15:25:10] 2025-11-24 20:24:25,770 | INFO     | mean x: 1764003149.294964
[2025-11-24 15:25:10] 2025-11-24 20:24:25,770 | INFO     | mean y: 3456791.0023980816
[2025-11-24 15:25:10] 2025-11-24 20:24:25,770 | INFO     | intersect: -19690790242.754894
[2025-11-24 15:25:10] 2025-11-24 20:24:25,770 | INFO     | chi2: 3.6741285304528084
[2025-11-24 15:25:10] 2025-11-24 20:24:25,770 | INFO     | current chi2=3.6741285304528084 (change=2.498168891392993 %)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,771 | INFO     | left removable region: 20
[2025-11-24 15:25:10] 2025-11-24 20:24:25,771 | INFO     | sum of square deviations: 19255824332.431885
[2025-11-24 15:25:10] 2025-11-24 20:24:25,774 | INFO     | sum of deviations: 384165355900.77277
[2025-11-24 15:25:10] 2025-11-24 20:24:25,775 | INFO     | mean x: 1764003118.7954545
[2025-11-24 15:25:10] 2025-11-24 20:24:25,775 | INFO     | mean y: 3505268.5404040404
[2025-11-24 15:25:10] 2025-11-24 20:24:25,775 | INFO     | intersect: -35189425153.07525
[2025-11-24 15:25:10] 2025-11-24 20:24:25,775 | INFO     | chi2: 0.0661600177478434
[2025-11-24 15:25:10] 2025-11-24 20:24:25,775 | INFO     | current memory leak: 19.95 B/s (using 396 data points, chi2=0.07)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | could have reported an average CPU frequency of 2413 MHz (18 samples)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | ..............................
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | . Timing measurements:
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | . get job = 0 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | . initial setup = 2 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | . payload setup = 7 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | . stage-in = 0 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,776 | INFO     | . payload execution = 26005 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,777 | INFO     | . stage-out = 3 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,777 | INFO     | . log creation = 0 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,777 | INFO     | ..............................
[2025-11-24 15:25:10] 2025-11-24 20:24:25,856 | INFO     | 
[2025-11-24 15:25:10] 2025-11-24 20:24:25,856 | INFO     | job summary report
[2025-11-24 15:25:10] 2025-11-24 20:24:25,857 | INFO     | --------------------------------------------------
[2025-11-24 15:25:10] 2025-11-24 20:24:25,857 | INFO     | PanDA job id: 6895365517
[2025-11-24 15:25:10] 2025-11-24 20:24:25,857 | INFO     | task id: 47556137
[2025-11-24 15:25:10] 2025-11-24 20:24:25,857 | INFO     | errors: (none)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,857 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 15:25:10] 2025-11-24 20:24:25,857 | INFO     | pilot state: finished 
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | transexitcode: 0
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | exeerrorcode: 0
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | exeerrordiag: 
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | exitcode: 0
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | exitmsg: OK
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | cpuconsumptiontime: 299773 s
[2025-11-24 15:25:10] 2025-11-24 20:24:25,858 | INFO     | nevents: 1000
[2025-11-24 15:25:10] 2025-11-24 20:24:25,859 | INFO     | neventsw: 0
[2025-11-24 15:25:10] 2025-11-24 20:24:25,859 | INFO     | pid: 24460
[2025-11-24 15:25:10] 2025-11-24 20:24:25,859 | INFO     | pgrp: 24460
[2025-11-24 15:25:10] 2025-11-24 20:24:25,859 | INFO     | corecount: 12
[2025-11-24 15:25:10] 2025-11-24 20:24:25,859 | INFO     | event service: False
[2025-11-24 15:25:10] 2025-11-24 20:24:25,859 | INFO     | sizes: {0: 2284259, 5: 2284521, 11: 2284577, 26016: 2321898, 26021: 2330948, 26028: 2331138}
[2025-11-24 15:25:10] 2025-11-24 20:24:25,860 | INFO     | --------------------------------------------------
[2025-11-24 15:25:10] 2025-11-24 20:24:25,860 | INFO     | 
[2025-11-24 15:25:10] 2025-11-24 20:24:25,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 15:25:10] 2025-11-24 20:24:25,885 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,886 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,886 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,886 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 15:25:10] 2025-11-24 20:24:25,888 | INFO     | job 6895365517 has completed (purged errors)
[2025-11-24 15:25:10] 2025-11-24 20:24:25,889 | INFO     | overall cleanup function is called
[2025-11-24 15:25:10] 2025-11-24 20:24:26,905 | INFO     | --- collectZombieJob: --- 10, [24460]
[2025-11-24 15:25:10] 2025-11-24 20:24:26,905 | INFO     | zombie collector waiting for pid 24460
[2025-11-24 15:25:10] 2025-11-24 20:24:26,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 15:25:10] 2025-11-24 20:24:26,905 | INFO     | collected zombie processes
[2025-11-24 15:25:10] 2025-11-24 20:24:26,905 | INFO     | will attempt to kill all subprocesses of pid=24460
[2025-11-24 15:25:10] 2025-11-24 20:24:26,994 | INFO     | process IDs to be killed: [24460] (in reverse order)
[2025-11-24 15:25:10] 2025-11-24 20:24:27,046 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 15:25:10] 2025-11-24 20:24:27,046 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 15:25:10] 2025-11-24 20:24:27,049 | INFO     | did not find any defunct processes belonging to 24460
[2025-11-24 15:25:10] 2025-11-24 20:24:27,052 | INFO     | did not find any defunct processes belonging to 24460
[2025-11-24 15:25:10] 2025-11-24 20:24:27,054 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 15:25:10] 2025-11-24 20:24:27,054 | INFO     | ready for new job
[2025-11-24 15:25:10] 2025-11-24 20:24:27,054 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 15:25:10] 2025-11-24 20:24:27,056 | INFO     | ***************************************
[2025-11-24 15:25:10] 2025-11-24 20:24:27,056 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 15:25:10] 2025-11-24 20:24:27,056 | INFO     | ***************************************
[2025-11-24 15:25:10] 2025-11-24 20:24:27,057 | INFO     | 
[2025-11-24 15:25:10] 2025-11-24 20:24:27,057 | INFO     | architecture information:
[2025-11-24 15:25:10] 2025-11-24 20:24:27,058 | INFO     | executing command: cat /etc/os-release
[2025-11-24 15:25:10] 2025-11-24 20:24:27,074 | INFO     | cat /etc/os-release:
[2025-11-24 15:25:10] NAME="CentOS Linux"
[2025-11-24 15:25:10] VERSION="7 (Core)"
[2025-11-24 15:25:10] ID="centos"
[2025-11-24 15:25:10] ID_LIKE="rhel fedora"
[2025-11-24 15:25:10] VERSION_ID="7"
[2025-11-24 15:25:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 15:25:10] ANSI_COLOR="0;31"
[2025-11-24 15:25:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 15:25:10] HOME_URL="https://www.centos.org/"
[2025-11-24 15:25:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 15:25:10] 
[2025-11-24 15:25:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 15:25:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 15:25:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 15:25:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 15:25:10] 
[2025-11-24 15:25:10] 2025-11-24 20:24:27,075 | INFO     | ***************************************
[2025-11-24 15:25:10] 2025-11-24 20:24:27,578 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 15:25:10] 2025-11-24 20:24:27,595 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-24 15:25:10] 2025-11-24 20:24:27,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 15:25:10] 2025-11-24 20:24:27,596 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 15:25:10] 2025-11-24 20:24:27,596 | INFO     | update_server=False
[2025-11-24 15:25:10] 2025-11-24 20:24:27,596 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 15:25:10] 2025-11-24 20:24:27,596 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 15:25:10] 2025-11-24 20:24:27,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:25:10] 2025-11-24 20:24:27,700 | INFO     | all payload control threads have been joined
[2025-11-24 15:25:10] 2025-11-24 20:24:27,805 | INFO     | all data control threads have been joined
[2025-11-24 15:25:10] 2025-11-24 20:24:27,969 | INFO     | all job control threads have been joined
[2025-11-24 15:25:10] 2025-11-24 20:24:27,979 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 15:25:10] 2025-11-24 20:24:27,979 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 15:25:10] 2025-11-24 20:24:27,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 15:25:10] 2025-11-24 20:24:27,979 | INFO     | will abort loop
[2025-11-24 15:25:10] 2025-11-24 20:24:28,602 | INFO     | [job] retrieve thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,602 | INFO     | [job] queue monitor thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,632 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,674 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,681 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,705 | INFO     | [payload] control thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,811 | INFO     | [data] control thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,974 | INFO     | [job] control thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:28,985 | INFO     | [job] job monitor thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:29,003 | INFO     | [data] copytool_in thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:29,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:29,030 | INFO     | [payload] failed_post thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:29,444 | INFO     | [job] validate thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:29,589 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 15:25:10] 2025-11-24 20:24:29,601 | INFO     | [data] copytool_out thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:29,648 | INFO     | [payload] validate_post thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:33,595 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 15:25:10] 2025-11-24 20:24:58,433 | INFO     | PID=17198 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 15:25:10] 2025-11-24 20:24:58,433 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 15:25:10] 2025-11-24 20:24:58,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 15:25:10] 2025-11-24 20:24:58,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 15:25:10] 2025-11-24 20:25:03,563 | INFO     | [monitor] cgroup control has ended
[2025-11-24 15:25:10] 2025-11-24 20:25:05,623 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140043471152960)>', '<ExcThread(monitor, started 140042886432512)>']
[2025-11-24 15:25:10] 2025-11-24 20:25:06,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 15:25:10] 2025-11-24 20:25:06,473 | INFO     | [monitor] control thread has ended
[2025-11-24 15:25:10] 2025-11-24 20:25:10,649 | INFO     | all workflow threads have been joined
[2025-11-24 15:25:10] 2025-11-24 20:25:10,649 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 15:25:10] 2025-11-24 20:25:10,650 | INFO     | traces error code: 0
[2025-11-24 15:25:10] 2025-11-24 20:25:10,650 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 15:25:10] 2025-11-24 20:25:10,746 [wrapper] ==== pilot stdout END ====
[2025-11-24 15:25:10] 2025-11-24 20:25:10,750 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 15:25:10] 2025-11-24 20:25:10,754 [wrapper] pilotpid: 17198
[2025-11-24 15:25:10] 2025-11-24 20:25:10,758 [wrapper] Pilot exit status: 0
[2025-11-24 15:25:10] 2025-11-24 20:25:10,773 [wrapper] pandaids: 6895365517
[2025-11-24 15:25:10] 2025-11-24 20:25:10,819 [wrapper] cleanup supervisor_pilot 29209 17199
[2025-11-24 15:25:10] 2025-11-24 20:25:10,823 [wrapper] Test setup, not cleaning
[2025-11-24 15:25:10] 2025-11-24 20:25:10,827 [wrapper] apfmon messages muted
[2025-11-24 15:25:10] 2025-11-24 20:25:10,831 [wrapper] ==== wrapper stdout END ====
[2025-11-24 15:25:10] 2025-11-24 20:25:10,834 [wrapper] ==== wrapper stderr END ====
[2025-11-24 15:25:10]  *** Error codes and diagnostics ***
[2025-11-24 15:25:10]     "exeErrorCode": 0,
[2025-11-24 15:25:10]     "exeErrorDiag": "",
[2025-11-24 15:25:10]     "pilotErrorCode": 0,
[2025-11-24 15:25:10]     "pilotErrorDiag": "",
[2025-11-24 15:25:10]  *** Listing of results directory ***
[2025-11-24 15:25:10] total 1309612
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-24 15:25:10] -rwx------ 1 boincer umatlas     36292 Nov 23 12:09 runpilot2-wrapper.sh
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:09 queuedata.json
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas       100 Nov 24 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 15:25:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 08:10 run_atlas
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas       105 Nov 24 08:10 job.xml
[2025-11-24 15:25:10] -rw-r--r-- 2 boincer umatlas 408582364 Nov 24 08:10 EVNT.47483658._000821.pool.root.1
[2025-11-24 15:25:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:10 start_atlas.sh
[2025-11-24 15:25:10] drwxrwx--x 2 boincer umatlas      4096 Nov 24 08:10 shared
[2025-11-24 15:25:10] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 08:10 input.tar.gz
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas         0 Nov 24 08:10 boinc_lockfile
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 08:10 pandaJob.out
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas        57 Nov 24 08:10 setup.sh.local
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas    988279 Nov 24 08:10 agis_schedconf.cvmfs.json
[2025-11-24 15:25:10] drwx------ 5 boincer umatlas      4096 Nov 24 08:10 pilot3
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas       533 Nov 24 15:16 boinc_task_state.xml
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas      5955 Nov 24 15:22 init_data.xml
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas 916863041 Nov 24 15:23 HITS.47556137._008079.pool.root.1
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas      1064 Nov 24 15:24 memory_monitor_summary.json
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas   1516227 Nov 24 15:24 agis_ddmendpoints.agis.ALL.json
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas   2179868 Nov 24 15:24 log.47556137._008079.job.log.tgz.1
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas      8682 Nov 24 15:24 heartbeat.json
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas        95 Nov 24 15:24 pilot_heartbeat.json
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas      4932 Nov 24 15:25 pilotlog.txt
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas   3660132 Nov 24 15:25 log.47556137._008079.job.log.1
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas       353 Nov 24 15:25 output.list
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas       620 Nov 24 15:25 runtime_log
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas   5857280 Nov 24 15:25 result.tar.gz
[2025-11-24 15:25:10] -rw------- 1 boincer umatlas       670 Nov 24 15:25 s76NDm4lSh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB3KKDmos9iWo.diag
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 15:25 runtime_log.err
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 15:25 boinc_mmap_file
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas        29 Nov 24 15:25 wrapper_checkpoint.txt
[2025-11-24 15:25:10] -rw-r--r-- 1 boincer umatlas     21296 Nov 24 15:25 stderr.txt
[2025-11-24 15:25:11] HITS file was successfully produced:
[2025-11-24 15:25:11] -rw------- 1 boincer umatlas 916863041 Nov 24 15:23 shared/HITS.pool.root.1
[2025-11-24 15:25:11]  *** Contents of shared directory: ***
[2025-11-24 15:25:11] total 1300708
[2025-11-24 15:25:11] -rw-r--r-- 2 boincer umatlas 408582364 Nov 24 08:10 ATLAS.root_0
[2025-11-24 15:25:11] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:10 start_atlas.sh
[2025-11-24 15:25:11] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 08:10 input.tar.gz
[2025-11-24 15:25:11] -rw------- 1 boincer umatlas 916863041 Nov 24 15:23 HITS.pool.root.1
[2025-11-24 15:25:11] -rw------- 1 boincer umatlas   5857280 Nov 24 15:25 result.tar.gz
15:25:12 (13515): run_atlas exited; CPU time 293162.711240
15:25:12 (13515): called boinc_finish(0)

</stderr_txt>
]]>

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