Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:15:48 (1651127): wrapper (7.7.26015): starting
11:15:48 (1651127): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 11:15:48] Arguments: --nthreads 3
[2025-11-27 11:15:48] Threads: 3
[2025-11-27 11:15:48] Checking for CVMFS
[2025-11-27 11:15:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 11:15:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 11:15:48] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 11:15:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 11:15:48] 2.9.2.0 1300652 2472 76200 153359 0 80 29430083 36864000 0 130560 0 912976 99.979 100370 1247 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 11:15:48] CVMFS is ok
[2025-11-27 11:15:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 11:15:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 11:15:48] Further information can be found at the LHC@home message board.
[2025-11-27 11:15:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 11:15:48] Checking for apptainer binary...
[2025-11-27 11:15:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 11:15:48] Running /usr/bin/apptainer --version
[2025-11-27 11:15:48] apptainer version 1.4.1-1.1
[2025-11-27 11:15:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 11:15:48] thA305
[2025-11-27 11:15:48] apptainer works
[2025-11-27 11:15:48] Set ATHENA_PROC_NUMBER=3
[2025-11-27 11:15:48] Set ATHENA_CORE_NUMBER=3
[2025-11-27 11:15:48] Starting ATLAS job with PandaID=6895365505
[2025-11-27 11:15:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:14:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:14:35] 2025-11-27 18:13:46,047 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:14:35] 2025-11-27 18:13:46,057 | INFO     | cat /etc/os-release:
[2025-11-27 19:14:35] NAME="CentOS Linux"
[2025-11-27 19:14:35] VERSION="7 (Core)"
[2025-11-27 19:14:35] ID="centos"
[2025-11-27 19:14:35] ID_LIKE="rhel fedora"
[2025-11-27 19:14:35] VERSION_ID="7"
[2025-11-27 19:14:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:14:35] ANSI_COLOR="0;31"
[2025-11-27 19:14:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:14:35] HOME_URL="https://www.centos.org/"
[2025-11-27 19:14:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:14:35] 
[2025-11-27 19:14:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:14:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:14:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:14:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:14:35] 
[2025-11-27 19:14:35] 2025-11-27 18:13:46,057 | INFO     | ***************************************
[2025-11-27 19:14:35] 2025-11-27 18:13:46,560 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 19:14:35] 2025-11-27 18:13:46,573 | INFO     | sufficient remaining disk space (227039772672 B)
[2025-11-27 19:14:35] 2025-11-27 18:13:46,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:14:35] 2025-11-27 18:13:46,574 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:14:35] 2025-11-27 18:13:46,574 | INFO     | update_server=False
[2025-11-27 19:14:35] 2025-11-27 18:13:46,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:14:35] 2025-11-27 18:13:46,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:14:35] 2025-11-27 18:13:46,574 | INFO     | aborting loop
[2025-11-27 19:14:35] 2025-11-27 18:13:46,574 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:14:35] 2025-11-27 18:13:47,372 | INFO     | all data control threads have been joined
[2025-11-27 19:14:35] 2025-11-27 18:13:47,468 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:14:35] 2025-11-27 18:13:47,579 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:47,580 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:47,580 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:47,608 | INFO     | all job control threads have been joined
[2025-11-27 19:14:35] 2025-11-27 18:13:47,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:14:35] 2025-11-27 18:13:47,871 | INFO     | all payload control threads have been joined
[2025-11-27 19:14:35] 2025-11-27 18:13:48,202 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,378 | INFO     | [data] control thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,415 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,614 | INFO     | [job] control thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,679 | INFO     | [job] validate thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,835 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,877 | INFO     | [payload] control thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,897 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:48,919 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:49,018 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:49,044 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:49,474 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:13:51,675 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:14:35] 2025-11-27 18:14:17,359 | INFO     | PID=1654843 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:14:35] 2025-11-27 18:14:17,359 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:14:35] 2025-11-27 18:14:17,359 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:14:35] 2025-11-27 18:14:17,359 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:14:35] 2025-11-27 18:14:29,025 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:14:35] 2025-11-27 18:14:30,577 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140707991144256)>', '<ExcThread(monitor, started 140707155146496)>']
[2025-11-27 19:14:35] 2025-11-27 18:14:31,432 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:14:35] 2025-11-27 18:14:31,433 | INFO     | [monitor] control thread has ended
[2025-11-27 19:14:35] 2025-11-27 18:14:35,580 | INFO     | all workflow threads have been joined
[2025-11-27 19:14:35] 2025-11-27 18:14:35,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:14:35] 2025-11-27 18:14:35,581 | INFO     | traces error code: 0
[2025-11-27 19:14:35] 2025-11-27 18:14:35,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:14:35] 2025-11-27 18:14:35,635 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:14:35] 2025-11-27 18:14:35,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:14:35] 2025-11-27 18:14:35,640 [wrapper] pilotpid: 1654843
[2025-11-27 19:14:35] 2025-11-27 18:14:35,642 [wrapper] Pilot exit status: 0
[2025-11-27 19:14:35] 2025-11-27 18:14:35,649 [wrapper] pandaids: 6895365505
[2025-11-27 19:14:35] 2025-11-27 18:14:35,667 [wrapper] cleanup supervisor_pilot 1714522 1654844
[2025-11-27 19:14:35] 2025-11-27 18:14:35,669 [wrapper] Test setup, not cleaning
[2025-11-27 19:14:35] 2025-11-27 18:14:35,672 [wrapper] apfmon messages muted
[2025-11-27 19:14:35] 2025-11-27 18:14:35,674 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:14:35] 2025-11-27 18:14:35,676 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:14:35]  *** Error codes and diagnostics ***
[2025-11-27 19:14:35]     "exeErrorCode": 0,
[2025-11-27 19:14:35]     "exeErrorDiag": "",
[2025-11-27 19:14:35]     "pilotErrorCode": 0,
[2025-11-27 19:14:35]     "pilotErrorDiag": "",
[2025-11-27 19:14:35]  *** Listing of results directory ***
[2025-11-27 19:14:35] total 1303532
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc    576529 Nov 23 18:07 pilot3.tar.gz
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc      5112 Nov 23 18:07 queuedata.json
[2025-11-27 19:14:35] -rwx------ 1 boinc boinc     36292 Nov 23 18:08 runpilot2-wrapper.sh
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc       100 Nov 27 11:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:14:35] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 11:15 run_atlas
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc       105 Nov 27 11:15 job.xml
[2025-11-27 19:14:35] -rw-r--r-- 2 boinc boinc 408209710 Nov 27 11:15 EVNT.47483658._000820.pool.root.1
[2025-11-27 19:14:35] -rw-r--r-- 2 boinc boinc    590100 Nov 27 11:15 input.tar.gz
[2025-11-27 19:14:35] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:15 start_atlas.sh
[2025-11-27 19:14:35] drwxrwx--x 2 boinc boinc      4096 Nov 27 11:15 shared
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc         0 Nov 27 11:15 boinc_setup_complete
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc      6440 Nov 27 11:15 init_data.xml
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc         0 Nov 27 11:15 boinc_lockfile
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc      2786 Nov 27 11:15 pandaJob.out
[2025-11-27 19:14:35] -rw------- 1 boinc boinc    991551 Nov 27 11:15 agis_schedconf.cvmfs.json
[2025-11-27 19:14:35] drwx------ 5 boinc boinc      4096 Nov 27 11:15 pilot3
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc       532 Nov 27 19:09 boinc_task_state.xml
[2025-11-27 19:14:35] -rw------- 1 boinc boinc 912301581 Nov 27 19:13 HITS.47556137._008067.pool.root.1
[2025-11-27 19:14:35] -rw------- 1 boinc boinc        95 Nov 27 19:13 pilot_heartbeat.json
[2025-11-27 19:14:35] -rw------- 1 boinc boinc      1027 Nov 27 19:13 memory_monitor_summary.json
[2025-11-27 19:14:35] -rw------- 1 boinc boinc   1516240 Nov 27 19:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:14:35] -rw------- 1 boinc boinc   1169232 Nov 27 19:13 log.47556137._008067.job.log.tgz.1
[2025-11-27 19:14:35] -rw------- 1 boinc boinc      8567 Nov 27 19:13 heartbeat.json
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc      8192 Nov 27 19:14 boinc_mmap_file
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc        28 Nov 27 19:14 wrapper_checkpoint.txt
[2025-11-27 19:14:35] -rw------- 1 boinc boinc      4752 Nov 27 19:14 pilotlog.txt
[2025-11-27 19:14:35] -rw------- 1 boinc boinc   4032278 Nov 27 19:14 log.47556137._008067.job.log.1
[2025-11-27 19:14:35] -rw------- 1 boinc boinc       353 Nov 27 19:14 output.list
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc       620 Nov 27 19:14 runtime_log
[2025-11-27 19:14:35] -rw------- 1 boinc boinc   5222400 Nov 27 19:14 result.tar.gz
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc      8898 Nov 27 19:14 runtime_log.err
[2025-11-27 19:14:35] -rw------- 1 boinc boinc       665 Nov 27 19:14 iwONDmikSh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm12KKDm9gW1Dn.diag
[2025-11-27 19:14:35] -rw-r--r-- 1 boinc boinc      8884 Nov 27 19:14 stderr.txt
[2025-11-27 19:14:35] HITS file was successfully produced:
[2025-11-27 19:14:35] -rw------- 1 boinc boinc 912301581 Nov 27 19:13 shared/HITS.pool.root.1
[2025-11-27 19:14:35]  *** Contents of shared directory: ***
[2025-11-27 19:14:35] total 1295264
[2025-11-27 19:14:35] -rw-r--r-- 2 boinc boinc 408209710 Nov 27 11:15 ATLAS.root_0
[2025-11-27 19:14:35] -rw-r--r-- 2 boinc boinc    590100 Nov 27 11:15 input.tar.gz
[2025-11-27 19:14:35] -rw-r--r-- 2 boinc boinc     15847 Nov 27 11:15 start_atlas.sh
[2025-11-27 19:14:35] -rw------- 1 boinc boinc 912301581 Nov 27 19:13 HITS.pool.root.1
[2025-11-27 19:14:35] -rw------- 1 boinc boinc   5222400 Nov 27 19:14 result.tar.gz
19:14:37 (1651127): run_atlas exited; CPU time 84696.527887
19:14:37 (1651127): called boinc_finish(0)

</stderr_txt>
]]>

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