Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:04:22 (21058): wrapper (7.7.26015): starting
08:04:22 (21058): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 08:04:22] Arguments: --nthreads 8
[2025-11-24 08:04:22] Threads: 8
[2025-11-24 08:04:22] Checking for CVMFS
[2025-11-24 08:04:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:04:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:04:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:04:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:04:22] 2.11.4.0 5420 114820 70124 153246 0 90 12893731 18432001 1828 130560 0 80801528 99.972 4886263 31801 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 08:04:22] CVMFS is ok
[2025-11-24 08:04:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:04:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:04:22] Further information can be found at the LHC@home message board.
[2025-11-24 08:04:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:04:22] Checking for apptainer binary...
[2025-11-24 08:04:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:04:22] Running /usr/bin/apptainer --version
[2025-11-24 08:04:22] apptainer version 1.3.2-1.el7
[2025-11-24 08:04:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:04:23] c-206-22.aglt2.org
[2025-11-24 08:04:23] apptainer works
[2025-11-24 08:04:23] Set ATHENA_PROC_NUMBER=8
[2025-11-24 08:04:23] Set ATHENA_CORE_NUMBER=8
[2025-11-24 08:04:23] Starting ATLAS job with PandaID=6895365215
[2025-11-24 08:04:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 03:35:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 03:35:38] 2025-11-25 08:34:27,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,248 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 03:35:38] 2025-11-25 08:34:29,254 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2100.7083333333335
[2025-11-25 03:35:38] 2025-11-25 08:34:29,259 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895365215/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,260 | INFO     | extracted standard info from prmon json
[2025-11-25 03:35:38] 2025-11-25 08:34:29,260 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 03:35:38] 2025-11-25 08:34:29,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 03:35:38] 2025-11-25 08:34:29,290 | INFO     | fitting pss+swap vs Time
[2025-11-25 03:35:38] 2025-11-25 08:34:29,292 | INFO     | sum of square deviations: 472827113053.9228
[2025-11-25 03:35:38] 2025-11-25 08:34:29,319 | INFO     | sum of deviations: 2425119528365.0234
[2025-11-25 03:35:38] 2025-11-25 08:34:29,319 | INFO     | mean x: 1764024574.6377063
[2025-11-25 03:35:38] 2025-11-25 08:34:29,320 | INFO     | mean y: 2870815.1007819287
[2025-11-25 03:35:38] 2025-11-25 08:34:29,320 | INFO     | intersect: -9044771179.959326
[2025-11-25 03:35:38] 2025-11-25 08:34:29,322 | INFO     | chi2: 5.860493067821616
[2025-11-25 03:35:38] 2025-11-25 08:34:29,323 | INFO     | sum of square deviations: 466692087004.3803
[2025-11-25 03:35:38] 2025-11-25 08:34:29,356 | INFO     | sum of deviations: 2796196373527.6553
[2025-11-25 03:35:38] 2025-11-25 08:34:29,357 | INFO     | mean x: 1764024422.1404886
[2025-11-25 03:35:38] 2025-11-25 08:34:29,357 | INFO     | mean y: 2880035.294066318
[2025-11-25 03:35:38] 2025-11-25 08:34:29,357 | INFO     | intersect: -10566312863.74293
[2025-11-25 03:35:38] 2025-11-25 08:34:29,359 | INFO     | chi2: 2.8090399274455544
[2025-11-25 03:35:38] 2025-11-25 08:34:29,359 | INFO     | current chi2=2.8090399274455544 (change=52.06819810317269 %)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,361 | INFO     | sum of square deviations: 460610364279.81494
[2025-11-25 03:35:38] 2025-11-25 08:34:29,402 | INFO     | sum of deviations: 2867181133036.848
[2025-11-25 03:35:38] 2025-11-25 08:34:29,403 | INFO     | mean x: 1764024269.6432953
[2025-11-25 03:35:38] 2025-11-25 08:34:29,403 | INFO     | mean y: 2881811.306748466
[2025-11-25 03:35:38] 2025-11-25 08:34:29,403 | INFO     | intersect: -10977715883.337887
[2025-11-25 03:35:38] 2025-11-25 08:34:29,405 | INFO     | chi2: 2.5334924397418246
[2025-11-25 03:35:38] 2025-11-25 08:34:29,405 | INFO     | current chi2=2.5334924397418246 (change=9.80931189377231 %)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,405 | INFO     | right removable region: 1140
[2025-11-25 03:35:38] 2025-11-25 08:34:29,407 | INFO     | sum of square deviations: 466691639264.3801
[2025-11-25 03:35:38] 2025-11-25 08:34:29,423 | INFO     | time since job start (70195s) is within the limit (172800.0s)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,439 | INFO     | sum of deviations: 2116205986766.2764
[2025-11-25 03:35:38] 2025-11-25 08:34:29,440 | INFO     | mean x: 1764024727.1404886
[2025-11-25 03:35:38] 2025-11-25 08:34:29,440 | INFO     | mean y: 2878485.364746946
[2025-11-25 03:35:38] 2025-11-25 08:34:29,440 | INFO     | intersect: -7996064230.349275
[2025-11-25 03:35:38] 2025-11-25 08:34:29,441 | INFO     | chi2: 3.743680753037422
[2025-11-25 03:35:38] 2025-11-25 08:34:29,441 | INFO     | current chi2=3.743680753037422 (change=36.120037858367894 %)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,442 | INFO     | sum of square deviations: 460609608978.39154
[2025-11-25 03:35:38] 2025-11-25 08:34:29,470 | INFO     | sum of deviations: 2026441473290.0986
[2025-11-25 03:35:38] 2025-11-25 08:34:29,470 | INFO     | mean x: 1764024879.6415424
[2025-11-25 03:35:38] 2025-11-25 08:34:29,470 | INFO     | mean y: 2880735.782646801
[2025-11-25 03:35:38] 2025-11-25 08:34:29,471 | INFO     | intersect: -7757906504.304858
[2025-11-25 03:35:38] 2025-11-25 08:34:29,472 | INFO     | chi2: 3.6643157500531904
[2025-11-25 03:35:38] 2025-11-25 08:34:29,472 | INFO     | current chi2=3.6643157500531904 (change=2.119972514211826 %)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,473 | INFO     | left removable region: 20
[2025-11-25 03:35:38] 2025-11-25 08:34:29,474 | INFO     | sum of square deviations: 435642577371.3962
[2025-11-25 03:35:38] 2025-11-25 08:34:29,517 | INFO     | sum of deviations: 2319625891597.115
[2025-11-25 03:35:38] 2025-11-25 08:34:29,517 | INFO     | mean x: 1764024849.1482143
[2025-11-25 03:35:38] 2025-11-25 08:34:29,517 | INFO     | mean y: 2895533.3848214285
[2025-11-25 03:35:38] 2025-11-25 08:34:29,517 | INFO     | intersect: -9389845043.522715
[2025-11-25 03:35:38] 2025-11-25 08:34:29,519 | INFO     | chi2: 0.24973503369865993
[2025-11-25 03:35:38] 2025-11-25 08:34:29,519 | INFO     | current memory leak: 5.32 B/s (using 1120 data points, chi2=0.25)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,520 | INFO     | could have reported an average CPU frequency of 2618 MHz (42 samples)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | ..............................
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . Timing measurements:
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . get job = 0 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . initial setup = 2 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . payload setup = 5 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . stage-in = 0 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . payload execution = 70160 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . stage-out = 3 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | . log creation = 0 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,521 | INFO     | ..............................
[2025-11-25 03:35:38] 2025-11-25 08:34:29,800 | INFO     | 
[2025-11-25 03:35:38] 2025-11-25 08:34:29,800 | INFO     | job summary report
[2025-11-25 03:35:38] 2025-11-25 08:34:29,800 | INFO     | --------------------------------------------------
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | PanDA job id: 6895365215
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | task id: 47556137
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | errors: (none)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | pilot state: finished 
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | transexitcode: 0
[2025-11-25 03:35:38] 2025-11-25 08:34:29,801 | INFO     | exeerrorcode: 0
[2025-11-25 03:35:38] 2025-11-25 08:34:29,802 | INFO     | exeerrordiag: 
[2025-11-25 03:35:38] 2025-11-25 08:34:29,802 | INFO     | exitcode: 0
[2025-11-25 03:35:38] 2025-11-25 08:34:29,802 | INFO     | exitmsg: OK
[2025-11-25 03:35:38] 2025-11-25 08:34:29,802 | INFO     | cpuconsumptiontime: 541128 s
[2025-11-25 03:35:38] 2025-11-25 08:34:29,802 | INFO     | nevents: 1000
[2025-11-25 03:35:38] 2025-11-25 08:34:29,802 | INFO     | neventsw: 0
[2025-11-25 03:35:38] 2025-11-25 08:34:29,803 | INFO     | pid: 2568
[2025-11-25 03:35:38] 2025-11-25 08:34:29,803 | INFO     | pgrp: 2568
[2025-11-25 03:35:38] 2025-11-25 08:34:29,803 | INFO     | corecount: 8
[2025-11-25 03:35:38] 2025-11-25 08:34:29,803 | INFO     | event service: False
[2025-11-25 03:35:38] 2025-11-25 08:34:29,803 | INFO     | sizes: {0: 2284133, 1: 2284332, 4: 2284594, 12: 2284622, 70169: 2341248, 70174: 2350275, 70175: 2350459, 70180: 2350705}
[2025-11-25 03:35:38] 2025-11-25 08:34:29,803 | INFO     | --------------------------------------------------
[2025-11-25 03:35:38] 2025-11-25 08:34:29,804 | INFO     | 
[2025-11-25 03:35:38] 2025-11-25 08:34:29,804 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 03:35:38] 2025-11-25 08:34:29,823 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,823 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,824 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,824 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,824 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,824 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,824 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,825 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,825 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,825 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,825 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,825 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 03:35:38] 2025-11-25 08:34:29,827 | INFO     | job 6895365215 has completed (purged errors)
[2025-11-25 03:35:38] 2025-11-25 08:34:29,827 | INFO     | overall cleanup function is called
[2025-11-25 03:35:38] 2025-11-25 08:34:30,844 | INFO     | --- collectZombieJob: --- 10, [2568]
[2025-11-25 03:35:38] 2025-11-25 08:34:30,844 | INFO     | zombie collector waiting for pid 2568
[2025-11-25 03:35:38] 2025-11-25 08:34:30,844 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 03:35:38] 2025-11-25 08:34:30,844 | INFO     | collected zombie processes
[2025-11-25 03:35:38] 2025-11-25 08:34:30,844 | INFO     | will attempt to kill all subprocesses of pid=2568
[2025-11-25 03:35:38] 2025-11-25 08:34:30,958 | INFO     | process IDs to be killed: [2568] (in reverse order)
[2025-11-25 03:35:38] 2025-11-25 08:34:31,014 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 03:35:38] 2025-11-25 08:34:31,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 03:35:38] 2025-11-25 08:34:31,017 | INFO     | did not find any defunct processes belonging to 2568
[2025-11-25 03:35:38] 2025-11-25 08:34:31,020 | INFO     | did not find any defunct processes belonging to 2568
[2025-11-25 03:35:38] 2025-11-25 08:34:31,021 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 03:35:38] 2025-11-25 08:34:31,022 | INFO     | ready for new job
[2025-11-25 03:35:38] 2025-11-25 08:34:31,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 03:35:38] 2025-11-25 08:34:31,026 | INFO     | ***************************************
[2025-11-25 03:35:38] 2025-11-25 08:34:31,026 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 03:35:38] 2025-11-25 08:34:31,026 | INFO     | ***************************************
[2025-11-25 03:35:38] 2025-11-25 08:34:31,026 | INFO     | 
[2025-11-25 03:35:38] 2025-11-25 08:34:31,027 | INFO     | architecture information:
[2025-11-25 03:35:38] 2025-11-25 08:34:31,027 | INFO     | executing command: cat /etc/os-release
[2025-11-25 03:35:38] 2025-11-25 08:34:31,038 | INFO     | cat /etc/os-release:
[2025-11-25 03:35:38] NAME="CentOS Linux"
[2025-11-25 03:35:38] VERSION="7 (Core)"
[2025-11-25 03:35:38] ID="centos"
[2025-11-25 03:35:38] ID_LIKE="rhel fedora"
[2025-11-25 03:35:38] VERSION_ID="7"
[2025-11-25 03:35:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 03:35:38] ANSI_COLOR="0;31"
[2025-11-25 03:35:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 03:35:38] HOME_URL="https://www.centos.org/"
[2025-11-25 03:35:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 03:35:38] 
[2025-11-25 03:35:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 03:35:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 03:35:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 03:35:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 03:35:38] 
[2025-11-25 03:35:38] 2025-11-25 08:34:31,038 | INFO     | ***************************************
[2025-11-25 03:35:38] 2025-11-25 08:34:31,541 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 03:35:38] 2025-11-25 08:34:31,556 | INFO     | sufficient remaining disk space (25654460416 B)
[2025-11-25 03:35:38] 2025-11-25 08:34:31,556 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 03:35:38] 2025-11-25 08:34:31,556 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 03:35:38] 2025-11-25 08:34:31,556 | INFO     | update_server=False
[2025-11-25 03:35:38] 2025-11-25 08:34:31,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 03:35:38] 2025-11-25 08:34:31,557 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 03:35:38] 2025-11-25 08:34:31,557 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:35:38] 2025-11-25 08:34:31,557 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 03:35:38] 2025-11-25 08:34:31,558 | INFO     | aborting loop
[2025-11-25 03:35:38] 2025-11-25 08:34:31,605 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 03:35:38] 2025-11-25 08:34:32,034 | INFO     | all payload control threads have been joined
[2025-11-25 03:35:38] 2025-11-25 08:34:32,328 | INFO     | all job control threads have been joined
[2025-11-25 03:35:38] 2025-11-25 08:34:32,436 | INFO     | all data control threads have been joined
[2025-11-25 03:35:38] 2025-11-25 08:34:32,562 | INFO     | [job] queue monitor thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:32,563 | INFO     | [job] retrieve thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:32,563 | INFO     | [job] job monitor thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:32,657 | INFO     | [payload] validate_post thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,036 | INFO     | [payload] control thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,217 | INFO     | [payload] failed_post thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,243 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,264 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,308 | INFO     | [job] validate thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,329 | INFO     | [job] control thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,336 | INFO     | [data] copytool_in thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,441 | INFO     | [data] control thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,611 | INFO     | [data] copytool_out thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:33,843 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:35,563 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 03:35:38] 2025-11-25 08:34:38,343 [wrapper] supervise_pilot (15 min periods counter: 79)
[2025-11-25 03:35:38] 2025-11-25 08:35:02,659 | INFO     | PID=25016 has CPU usage=7.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 03:35:38] 2025-11-25 08:35:02,659 | INFO     | .. there are 3 such processes running
[2025-11-25 03:35:38] 2025-11-25 08:35:02,660 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 03:35:38] 2025-11-25 08:35:02,660 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 03:35:38] 2025-11-25 08:35:02,660 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 03:35:38] 2025-11-25 08:35:31,145 | INFO     | [monitor] cgroup control has ended
[2025-11-25 03:35:38] 2025-11-25 08:35:33,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140471001294656)>', '<ExcThread(monitor, started 140470554437376)>']
[2025-11-25 03:35:38] 2025-11-25 08:35:33,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 03:35:38] 2025-11-25 08:35:33,810 | INFO     | [monitor] control thread has ended
[2025-11-25 03:35:38] 2025-11-25 08:35:38,185 | INFO     | all workflow threads have been joined
[2025-11-25 03:35:38] 2025-11-25 08:35:38,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 03:35:38] 2025-11-25 08:35:38,186 | INFO     | traces error code: 0
[2025-11-25 03:35:38] 2025-11-25 08:35:38,186 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 03:35:38] 2025-11-25 08:35:38,323 [wrapper] ==== pilot stdout END ====
[2025-11-25 03:35:38] 2025-11-25 08:35:38,325 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 03:35:38] 2025-11-25 08:35:38,327 [wrapper] pilotpid: 25016
[2025-11-25 03:35:38] 2025-11-25 08:35:38,330 [wrapper] Pilot exit status: 0
[2025-11-25 03:35:38] 2025-11-25 08:35:38,338 [wrapper] pandaids: 6895365215
[2025-11-25 03:35:38] 2025-11-25 08:35:38,371 [wrapper] cleanup supervisor_pilot 16582 25018
[2025-11-25 03:35:38] 2025-11-25 08:35:38,373 [wrapper] Test setup, not cleaning
[2025-11-25 03:35:38] 2025-11-25 08:35:38,375 [wrapper] apfmon messages muted
[2025-11-25 03:35:38] 2025-11-25 08:35:38,377 [wrapper] ==== wrapper stdout END ====
[2025-11-25 03:35:38] 2025-11-25 08:35:38,379 [wrapper] ==== wrapper stderr END ====
[2025-11-25 03:35:38]  *** Error codes and diagnostics ***
[2025-11-25 03:35:38]     "exeErrorCode": 0,
[2025-11-25 03:35:38]     "exeErrorDiag": "",
[2025-11-25 03:35:38]     "pilotErrorCode": 0,
[2025-11-25 03:35:38]     "pilotErrorDiag": "",
[2025-11-25 03:35:38]  *** Listing of results directory ***
[2025-11-25 03:35:38] total 1323856
[2025-11-25 03:35:38] -rwx------ 1 boincer umatlas     36292 Nov 23 12:07 runpilot2-wrapper.sh
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:07 queuedata.json
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 12:07 pilot3.tar.gz
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas       100 Nov 24 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 03:35:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 08:04 run_atlas
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas       105 Nov 24 08:04 job.xml
[2025-11-25 03:35:38] -rw-r--r-- 2 boincer umatlas 408209710 Nov 24 08:04 EVNT.47483658._000820.pool.root.1
[2025-11-25 03:35:38] drwxrwx--x 2 boincer umatlas      4096 Nov 24 08:04 shared
[2025-11-25 03:35:38] -rw-r--r-- 2 boincer umatlas    590097 Nov 24 08:04 input.tar.gz
[2025-11-25 03:35:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:04 start_atlas.sh
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas         0 Nov 24 08:04 boinc_lockfile
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas      2783 Nov 24 08:04 pandaJob.out
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas        57 Nov 24 08:04 setup.sh.local
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas    988279 Nov 24 08:04 agis_schedconf.cvmfs.json
[2025-11-25 03:35:38] drwx------ 5 boincer umatlas      4096 Nov 24 08:04 pilot3
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas       533 Nov 25 03:25 boinc_task_state.xml
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas      5952 Nov 25 03:30 init_data.xml
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas 919400211 Nov 25 03:33 HITS.47556137._008061.pool.root.1
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas      1064 Nov 25 03:34 memory_monitor_summary.json
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas   1516240 Nov 25 03:34 agis_ddmendpoints.agis.ALL.json
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas   2317255 Nov 25 03:34 log.47556137._008061.job.log.tgz.1
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas      8673 Nov 25 03:34 heartbeat.json
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas        95 Nov 25 03:35 pilot_heartbeat.json
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 03:35 boinc_mmap_file
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas        29 Nov 25 03:35 wrapper_checkpoint.txt
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas      4821 Nov 25 03:35 pilotlog.txt
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas   9734448 Nov 25 03:35 log.47556137._008061.job.log.1
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas       353 Nov 25 03:35 output.list
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas       620 Nov 25 03:35 runtime_log
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas  12072960 Nov 25 03:35 result.tar.gz
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 03:35 runtime_log.err
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas       668 Nov 25 03:35 0oHLDmZjSh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmx2KKDm6pYgYm.diag
[2025-11-25 03:35:38] -rw-r--r-- 1 boincer umatlas     21284 Nov 25 03:35 stderr.txt
[2025-11-25 03:35:38] HITS file was successfully produced:
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas 919400211 Nov 25 03:33 shared/HITS.pool.root.1
[2025-11-25 03:35:38]  *** Contents of shared directory: ***
[2025-11-25 03:35:38] total 1308888
[2025-11-25 03:35:38] -rw-r--r-- 2 boincer umatlas 408209710 Nov 24 08:04 ATLAS.root_0
[2025-11-25 03:35:38] -rw-r--r-- 2 boincer umatlas    590097 Nov 24 08:04 input.tar.gz
[2025-11-25 03:35:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 08:04 start_atlas.sh
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas 919400211 Nov 25 03:33 HITS.pool.root.1
[2025-11-25 03:35:38] -rw------- 1 boincer umatlas  12072960 Nov 25 03:35 result.tar.gz
03:35:39 (21058): run_atlas exited; CPU time 539834.036600
03:35:39 (21058): called boinc_finish(0)

</stderr_txt>
]]>

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