Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:56:37 (26501): wrapper (7.7.26015): starting
07:56:37 (26501): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 07:56:37] Arguments: --nthreads 12
[2025-11-24 07:56:37] Threads: 12
[2025-11-24 07:56:37] Checking for CVMFS
[2025-11-24 07:56:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:56:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:56:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:56:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:56:37] 2.11.2.0 14820 140174 92308 153246 3 81 14025471 20275201 1 130560 0 68312766 99.961 5639341 35893 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 07:56:37] CVMFS is ok
[2025-11-24 07:56:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:56:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 07:56:37] Further information can be found at the LHC@home message board.
[2025-11-24 07:56:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:56:37] Checking for apptainer binary...
[2025-11-24 07:56:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 07:56:37] Running /usr/bin/apptainer --version
[2025-11-24 07:56:37] apptainer version 1.3.2-1.el7
[2025-11-24 07:56:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:56:39] c-205-27.aglt2.org
[2025-11-24 07:56:39] apptainer works
[2025-11-24 07:56:39] Set ATHENA_PROC_NUMBER=12
[2025-11-24 07:56:39] Set ATHENA_CORE_NUMBER=12
[2025-11-24 07:56:39] Starting ATLAS job with PandaID=6895365205
[2025-11-24 07:56:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:58:06]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:58:06] 2025-11-24 19:57:30,686 | INFO     | time since job start (25237s) is within the limit (172800.0s)
[2025-11-24 14:58:06] 2025-11-24 19:57:30,858 | INFO     | monitor loop #1893: job 0:6895365205 is in state 'finished'
[2025-11-24 14:58:06] 2025-11-24 19:57:30,858 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,692 | INFO     | time since job start (25239s) is within the limit (172800.0s)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,947 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 14:58:06] 2025-11-24 19:57:32,951 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 14:58:06] 2025-11-24 19:57:32,953 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895365205/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,954 | INFO     | extracted standard info from prmon json
[2025-11-24 14:58:06] 2025-11-24 19:57:32,954 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 14:58:06] 2025-11-24 19:57:32,954 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 14:58:06] 2025-11-24 19:57:32,962 | INFO     | fitting pss+swap vs Time
[2025-11-24 14:58:06] 2025-11-24 19:57:32,962 | INFO     | sum of square deviations: 22002721939.497543
[2025-11-24 14:58:06] 2025-11-24 19:57:32,966 | INFO     | sum of deviations: 342529290111.1547
[2025-11-24 14:58:06] 2025-11-24 19:57:32,966 | INFO     | mean x: 1764001639.7198067
[2025-11-24 14:58:06] 2025-11-24 19:57:32,966 | INFO     | mean y: 3402757.4323671497
[2025-11-24 14:58:06] 2025-11-24 19:57:32,967 | INFO     | intersect: -27457846403.903736
[2025-11-24 14:58:06] 2025-11-24 19:57:32,967 | INFO     | chi2: 6.2969588178807925
[2025-11-24 14:58:06] 2025-11-24 19:57:32,968 | INFO     | sum of square deviations: 21215134926.753063
[2025-11-24 14:58:06] 2025-11-24 19:57:32,971 | INFO     | sum of deviations: 505429325140.9334
[2025-11-24 14:58:06] 2025-11-24 19:57:32,971 | INFO     | mean x: 1764001487.222494
[2025-11-24 14:58:06] 2025-11-24 19:57:32,971 | INFO     | mean y: 3434267.5941320295
[2025-11-24 14:58:06] 2025-11-24 19:57:32,972 | INFO     | intersect: -42022133060.29287
[2025-11-24 14:58:06] 2025-11-24 19:57:32,972 | INFO     | chi2: 3.0968048951003717
[2025-11-24 14:58:06] 2025-11-24 19:57:32,972 | INFO     | current chi2=3.0968048951003717 (change=50.8206265172529 %)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,973 | INFO     | sum of square deviations: 20446571526.50245
[2025-11-24 14:58:06] 2025-11-24 19:57:32,976 | INFO     | sum of deviations: 552053747231.1827
[2025-11-24 14:58:06] 2025-11-24 19:57:32,976 | INFO     | mean x: 1764001334.7252476
[2025-11-24 14:58:06] 2025-11-24 19:57:32,976 | INFO     | mean y: 3443475.668316832
[2025-11-24 14:58:06] 2025-11-24 19:57:32,976 | INFO     | intersect: -47624274730.95765
[2025-11-24 14:58:06] 2025-11-24 19:57:32,977 | INFO     | chi2: 2.612418287733145
[2025-11-24 14:58:06] 2025-11-24 19:57:32,977 | INFO     | current chi2=2.612418287733145 (change=15.641495792440837 %)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,977 | INFO     | right removable region: 403
[2025-11-24 14:58:06] 2025-11-24 19:57:32,978 | INFO     | sum of square deviations: 21215079416.753067
[2025-11-24 14:58:06] 2025-11-24 19:57:32,981 | INFO     | sum of deviations: 201798431245.1513
[2025-11-24 14:58:06] 2025-11-24 19:57:32,981 | INFO     | mean x: 1764001792.222494
[2025-11-24 14:58:06] 2025-11-24 19:57:32,981 | INFO     | mean y: 3429927.6356968214
[2025-11-24 14:58:06] 2025-11-24 19:57:32,982 | INFO     | intersect: -16775804662.59784
[2025-11-24 14:58:06] 2025-11-24 19:57:32,982 | INFO     | chi2: 3.857249389384599
[2025-11-24 14:58:06] 2025-11-24 19:57:32,982 | INFO     | current chi2=3.857249389384599 (change=38.74424939176058 %)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,983 | INFO     | sum of square deviations: 20446510037.393497
[2025-11-24 14:58:06] 2025-11-24 19:57:32,986 | INFO     | sum of deviations: 170785959193.84406
[2025-11-24 14:58:06] 2025-11-24 19:57:32,986 | INFO     | mean x: 1764001944.720297
[2025-11-24 14:58:06] 2025-11-24 19:57:32,986 | INFO     | mean y: 3436073.2995049506
[2025-11-24 14:58:06] 2025-11-24 19:57:32,987 | INFO     | intersect: -14730949579.699074
[2025-11-24 14:58:06] 2025-11-24 19:57:32,987 | INFO     | chi2: 3.8044059250857534
[2025-11-24 14:58:06] 2025-11-24 19:57:32,987 | INFO     | current chi2=3.8044059250857534 (change=1.3699779030174826 %)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,987 | INFO     | left removable region: 20
[2025-11-24 14:58:06] 2025-11-24 19:57:32,988 | INFO     | sum of square deviations: 17421041915.576893
[2025-11-24 14:58:06] 2025-11-24 19:57:32,991 | INFO     | sum of deviations: 340359200491.01044
[2025-11-24 14:58:06] 2025-11-24 19:57:32,991 | INFO     | mean x: 1764001914.2193213
[2025-11-24 14:58:06] 2025-11-24 19:57:32,991 | INFO     | mean y: 3486269.8093994777
[2025-11-24 14:58:06] 2025-11-24 19:57:32,991 | INFO     | intersect: -34460254997.6668
[2025-11-24 14:58:06] 2025-11-24 19:57:32,992 | INFO     | chi2: 0.06358736013097349
[2025-11-24 14:58:06] 2025-11-24 19:57:32,992 | INFO     | current memory leak: 19.54 B/s (using 383 data points, chi2=0.06)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,992 | INFO     | could have reported an average CPU frequency of 2405 MHz (17 samples)
[2025-11-24 14:58:06] 2025-11-24 19:57:32,992 | INFO     | ..............................
[2025-11-24 14:58:06] 2025-11-24 19:57:32,992 | INFO     | . Timing measurements:
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . get job = 0 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . initial setup = 2 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . payload setup = 7 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . stage-in = 0 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . payload execution = 25199 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . stage-out = 4 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | . log creation = 0 s
[2025-11-24 14:58:06] 2025-11-24 19:57:32,993 | INFO     | ..............................
[2025-11-24 14:58:06] 2025-11-24 19:57:33,073 | INFO     | 
[2025-11-24 14:58:06] 2025-11-24 19:57:33,074 | INFO     | job summary report
[2025-11-24 14:58:06] 2025-11-24 19:57:33,074 | INFO     | --------------------------------------------------
[2025-11-24 14:58:06] 2025-11-24 19:57:33,074 | INFO     | PanDA job id: 6895365205
[2025-11-24 14:58:06] 2025-11-24 19:57:33,074 | INFO     | task id: 47556137
[2025-11-24 14:58:06] 2025-11-24 19:57:33,074 | INFO     | errors: (none)
[2025-11-24 14:58:06] 2025-11-24 19:57:33,074 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 14:58:06] 2025-11-24 19:57:33,075 | INFO     | pilot state: finished 
[2025-11-24 14:58:06] 2025-11-24 19:57:33,075 | INFO     | transexitcode: 0
[2025-11-24 14:58:06] 2025-11-24 19:57:33,075 | INFO     | exeerrorcode: 0
[2025-11-24 14:58:06] 2025-11-24 19:57:33,075 | INFO     | exeerrordiag: 
[2025-11-24 14:58:06] 2025-11-24 19:57:33,075 | INFO     | exitcode: 0
[2025-11-24 14:58:06] 2025-11-24 19:57:33,075 | INFO     | exitmsg: OK
[2025-11-24 14:58:06] 2025-11-24 19:57:33,076 | INFO     | cpuconsumptiontime: 289011 s
[2025-11-24 14:58:06] 2025-11-24 19:57:33,076 | INFO     | nevents: 1000
[2025-11-24 14:58:06] 2025-11-24 19:57:33,076 | INFO     | neventsw: 0
[2025-11-24 14:58:06] 2025-11-24 19:57:33,076 | INFO     | pid: 6023
[2025-11-24 14:58:06] 2025-11-24 19:57:33,076 | INFO     | pgrp: 6023
[2025-11-24 14:58:06] 2025-11-24 19:57:33,076 | INFO     | corecount: 12
[2025-11-24 14:58:06] 2025-11-24 19:57:33,077 | INFO     | event service: False
[2025-11-24 14:58:06] 2025-11-24 19:57:33,077 | INFO     | sizes: {0: 2284132, 1: 2284331, 6: 2284593, 11: 2284621, 25211: 2321570, 25215: 2330564, 25218: 2330748, 25223: 2331058}
[2025-11-24 14:58:06] 2025-11-24 19:57:33,077 | INFO     | --------------------------------------------------
[2025-11-24 14:58:06] 2025-11-24 19:57:33,077 | INFO     | 
[2025-11-24 14:58:06] 2025-11-24 19:57:33,077 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 14:58:06] 2025-11-24 19:57:33,101 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,102 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,102 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,102 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,103 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,103 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,103 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,104 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,104 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,104 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 14:58:06] 2025-11-24 19:57:33,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 14:58:06] 2025-11-24 19:57:33,105 | INFO     | job 6895365205 has completed (purged errors)
[2025-11-24 14:58:06] 2025-11-24 19:57:33,105 | INFO     | overall cleanup function is called
[2025-11-24 14:58:06] 2025-11-24 19:57:34,121 | INFO     | --- collectZombieJob: --- 10, [6023]
[2025-11-24 14:58:06] 2025-11-24 19:57:34,121 | INFO     | zombie collector waiting for pid 6023
[2025-11-24 14:58:06] 2025-11-24 19:57:34,122 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 14:58:06] 2025-11-24 19:57:34,122 | INFO     | collected zombie processes
[2025-11-24 14:58:06] 2025-11-24 19:57:34,122 | INFO     | will attempt to kill all subprocesses of pid=6023
[2025-11-24 14:58:06] 2025-11-24 19:57:34,214 | INFO     | process IDs to be killed: [6023] (in reverse order)
[2025-11-24 14:58:06] 2025-11-24 19:57:34,267 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 14:58:06] 2025-11-24 19:57:34,267 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 14:58:06] 2025-11-24 19:57:34,271 | INFO     | did not find any defunct processes belonging to 6023
[2025-11-24 14:58:06] 2025-11-24 19:57:34,274 | INFO     | did not find any defunct processes belonging to 6023
[2025-11-24 14:58:06] 2025-11-24 19:57:34,277 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 14:58:06] 2025-11-24 19:57:34,277 | INFO     | ready for new job
[2025-11-24 14:58:06] 2025-11-24 19:57:34,277 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 14:58:06] 2025-11-24 19:57:34,279 | INFO     | ***************************************
[2025-11-24 14:58:06] 2025-11-24 19:57:34,280 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 14:58:06] 2025-11-24 19:57:34,280 | INFO     | ***************************************
[2025-11-24 14:58:06] 2025-11-24 19:57:34,280 | INFO     | 
[2025-11-24 14:58:06] 2025-11-24 19:57:34,280 | INFO     | architecture information:
[2025-11-24 14:58:06] 2025-11-24 19:57:34,281 | INFO     | executing command: cat /etc/os-release
[2025-11-24 14:58:06] 2025-11-24 19:57:34,295 | INFO     | cat /etc/os-release:
[2025-11-24 14:58:06] NAME="CentOS Linux"
[2025-11-24 14:58:06] VERSION="7 (Core)"
[2025-11-24 14:58:06] ID="centos"
[2025-11-24 14:58:06] ID_LIKE="rhel fedora"
[2025-11-24 14:58:06] VERSION_ID="7"
[2025-11-24 14:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 14:58:06] ANSI_COLOR="0;31"
[2025-11-24 14:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 14:58:06] HOME_URL="https://www.centos.org/"
[2025-11-24 14:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 14:58:06] 
[2025-11-24 14:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 14:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:58:06] 
[2025-11-24 14:58:06] 2025-11-24 19:57:34,296 | INFO     | ***************************************
[2025-11-24 14:58:06] 2025-11-24 19:57:34,799 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 14:58:06] 2025-11-24 19:57:34,815 | INFO     | sufficient remaining disk space (28271706112 B)
[2025-11-24 14:58:06] 2025-11-24 19:57:34,815 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:58:06] 2025-11-24 19:57:34,816 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:58:06] 2025-11-24 19:57:34,816 | INFO     | update_server=False
[2025-11-24 14:58:06] 2025-11-24 19:57:34,816 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:58:06] 2025-11-24 19:57:34,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:58:06] 2025-11-24 19:57:34,816 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:58:06] 2025-11-24 19:57:34,817 | INFO     | aborting loop
[2025-11-24 14:58:06] 2025-11-24 19:57:34,862 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:58:06] 2025-11-24 19:57:35,096 | INFO     | all data control threads have been joined
[2025-11-24 14:58:06] 2025-11-24 19:57:35,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:58:06] 2025-11-24 19:57:35,356 | INFO     | all job control threads have been joined
[2025-11-24 14:58:06] 2025-11-24 19:57:35,821 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:35,822 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:35,823 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,038 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,102 | INFO     | [data] control thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,113 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,154 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,204 | INFO     | all payload control threads have been joined
[2025-11-24 14:58:06] 2025-11-24 19:57:36,362 | INFO     | [job] control thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,621 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,765 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:36,849 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:37,209 | INFO     | [payload] control thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:37,215 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:37,237 | INFO     | [job] validate thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:37,348 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:37,972 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:58:06] 2025-11-24 19:57:41,978 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:58:06] 2025-11-24 19:57:43,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395954739008)>', '<ExcThread(monitor, started 140395132466944)>']
[2025-11-24 14:58:06] 2025-11-24 19:57:48,565 | INFO     | all workflow threads have been joined
[2025-11-24 14:58:06] 2025-11-24 19:57:48,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:58:06] 2025-11-24 19:57:48,565 | INFO     | traces error code: 0
[2025-11-24 14:58:06] 2025-11-24 19:57:48,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:58:06] 2025-11-24 19:58:05,895 | INFO     | PID=31026 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 14:58:06] 2025-11-24 19:58:05,896 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:58:06] 2025-11-24 19:58:05,896 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:58:06] 2025-11-24 19:58:05,896 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:58:06] 2025-11-24 19:58:05,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:58:06] 2025-11-24 19:58:05,897 | INFO     | [monitor] control thread has ended
[2025-11-24 14:58:06] 2025-11-24 19:58:05,993 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:58:06] 2025-11-24 19:58:05,997 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:58:06] 2025-11-24 19:58:06,001 [wrapper] pilotpid: 31026
[2025-11-24 14:58:06] 2025-11-24 19:58:06,004 [wrapper] Pilot exit status: 0
[2025-11-24 14:58:06] 2025-11-24 19:58:06,017 [wrapper] pandaids: 6895365205
[2025-11-24 14:58:06] 2025-11-24 19:58:06,060 [wrapper] cleanup supervisor_pilot  8032 31027
[2025-11-24 14:58:06] 2025-11-24 19:58:06,063 [wrapper] Test setup, not cleaning
[2025-11-24 14:58:06] 2025-11-24 19:58:06,067 [wrapper] apfmon messages muted
[2025-11-24 14:58:06] 2025-11-24 19:58:06,071 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:58:06] 2025-11-24 19:58:06,075 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:58:06]  *** Error codes and diagnostics ***
[2025-11-24 14:58:06]     "exeErrorCode": 0,
[2025-11-24 14:58:06]     "exeErrorDiag": "",
[2025-11-24 14:58:06]     "pilotErrorCode": 0,
[2025-11-24 14:58:06]     "pilotErrorDiag": "",
[2025-11-24 14:58:06]  *** Listing of results directory ***
[2025-11-24 14:58:06] total 1291268
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 11:55 pilot3.tar.gz
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 12:03 queuedata.json
[2025-11-24 14:58:06] -rwx------ 1 boincer umatlas     36292 Nov 23 12:03 runpilot2-wrapper.sh
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas       100 Nov 24 07:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:58:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 07:56 run_atlas
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas       105 Nov 24 07:56 job.xml
[2025-11-24 14:58:06] -rw-r--r-- 2 boincer umatlas 408600904 Nov 24 07:56 EVNT.47483658._000819.pool.root.1
[2025-11-24 14:58:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 07:56 start_atlas.sh
[2025-11-24 14:58:06] drwxrwx--x 2 boincer umatlas      4096 Nov 24 07:56 shared
[2025-11-24 14:58:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 07:56 input.tar.gz
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas         0 Nov 24 07:56 boinc_lockfile
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas      2782 Nov 24 07:56 pandaJob.out
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas        57 Nov 24 07:56 setup.sh.local
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas    988279 Nov 24 07:56 agis_schedconf.cvmfs.json
[2025-11-24 14:58:06] drwx------ 5 boincer umatlas      4096 Nov 24 07:56 pilot3
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas       532 Nov 24 14:48 boinc_task_state.xml
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 14:49 init_data.xml
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas 898310976 Nov 24 14:56 HITS.47556137._008051.pool.root.1
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas      1065 Nov 24 14:57 memory_monitor_summary.json
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas   1516227 Nov 24 14:57 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas   2187977 Nov 24 14:57 log.47556137._008051.job.log.tgz.1
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas      8663 Nov 24 14:57 heartbeat.json
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas        29 Nov 24 14:57 wrapper_checkpoint.txt
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 14:57 boinc_mmap_file
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas        95 Nov 24 14:58 pilot_heartbeat.json
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas       745 Nov 24 14:58 pilotlog.txt
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas   3526349 Nov 24 14:58 log.47556137._008051.job.log.1
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas       353 Nov 24 14:58 output.list
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas       620 Nov 24 14:58 runtime_log
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas   5734400 Nov 24 14:58 result.tar.gz
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 14:58 runtime_log.err
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas       670 Nov 24 14:58 5JPKDmGgSh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmv2KKDmU8Hmun.diag
[2025-11-24 14:58:06] -rw-r--r-- 1 boincer umatlas     21328 Nov 24 14:58 stderr.txt
[2025-11-24 14:58:06] HITS file was successfully produced:
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas 898310976 Nov 24 14:56 shared/HITS.pool.root.1
[2025-11-24 14:58:06]  *** Contents of shared directory: ***
[2025-11-24 14:58:06] total 1282492
[2025-11-24 14:58:06] -rw-r--r-- 2 boincer umatlas 408600904 Nov 24 07:56 ATLAS.root_0
[2025-11-24 14:58:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 07:56 start_atlas.sh
[2025-11-24 14:58:06] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 07:56 input.tar.gz
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas 898310976 Nov 24 14:56 HITS.pool.root.1
[2025-11-24 14:58:06] -rw------- 1 boincer umatlas   5734400 Nov 24 14:58 result.tar.gz
14:58:07 (26501): run_atlas exited; CPU time 282505.580223
14:58:07 (26501): called boinc_finish(0)

</stderr_txt>
]]>

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