Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:55:26 (3276): wrapper (7.7.26015): starting
09:55:26 (3276): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 09:55:26] Arguments: --nthreads 12
[2025-11-24 09:55:26] Threads: 12
[2025-11-24 09:55:26] Checking for CVMFS
[2025-11-24 09:55:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:55:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:55:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:55:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:55:26] 2.11.2.0 2979 284963 93476 153248 1 81 13594403 20275201 1 130560 1 127537461 99.975 15939064 13820 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 09:55:26] CVMFS is ok
[2025-11-24 09:55:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:55:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:55:26] Further information can be found at the LHC@home message board.
[2025-11-24 09:55:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:55:26] Checking for apptainer binary...
[2025-11-24 09:55:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:55:26] Running /usr/bin/apptainer --version
[2025-11-24 09:55:26] apptainer version 1.3.2-1.el7
[2025-11-24 09:55:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:55:28] c-205-21.aglt2.org
[2025-11-24 09:55:28] apptainer works
[2025-11-24 09:55:28] Set ATHENA_PROC_NUMBER=12
[2025-11-24 09:55:28] Set ATHENA_CORE_NUMBER=12
[2025-11-24 09:55:28] Starting ATLAS job with PandaID=6895346845
[2025-11-24 09:55:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:04:31]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:04:31] 2025-11-24 22:03:42,103 | INFO     | time since job start (25678s) is within the limit (172800.0s)
[2025-11-24 17:04:31] 2025-11-24 22:03:42,527 | INFO     | monitor loop #1923: job 0:6895346845 is in state 'finished'
[2025-11-24 17:04:31] 2025-11-24 22:03:42,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,174 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:04:31] 2025-11-24 22:03:43,178 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-24 17:04:31] 2025-11-24 22:03:43,181 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895346845/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,181 | INFO     | extracted standard info from prmon json
[2025-11-24 17:04:31] 2025-11-24 22:03:43,181 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:04:31] 2025-11-24 22:03:43,181 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:04:31] 2025-11-24 22:03:43,189 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:04:31] 2025-11-24 22:03:43,190 | INFO     | sum of square deviations: 23138131874.308838
[2025-11-24 17:04:31] 2025-11-24 22:03:43,193 | INFO     | sum of deviations: 344438955068.1928
[2025-11-24 17:04:31] 2025-11-24 22:03:43,193 | INFO     | mean x: 1764008983.247031
[2025-11-24 17:04:31] 2025-11-24 22:03:43,193 | INFO     | mean y: 3409101.3539192397
[2025-11-24 17:04:31] 2025-11-24 22:03:43,194 | INFO     | intersect: -26255988771.43403
[2025-11-24 17:04:31] 2025-11-24 22:03:43,194 | INFO     | chi2: 6.141336493732942
[2025-11-24 17:04:31] 2025-11-24 22:03:43,195 | INFO     | sum of square deviations: 22323525064.0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,198 | INFO     | sum of deviations: 509856519416.49994
[2025-11-24 17:04:31] 2025-11-24 22:03:43,198 | INFO     | mean x: 1764008830.75
[2025-11-24 17:04:31] 2025-11-24 22:03:43,199 | INFO     | mean y: 3440035.408653846
[2025-11-24 17:04:31] 2025-11-24 22:03:43,199 | INFO     | intersect: -40285510750.26126
[2025-11-24 17:04:31] 2025-11-24 22:03:43,199 | INFO     | chi2: 2.9228795669921075
[2025-11-24 17:04:31] 2025-11-24 22:03:43,199 | INFO     | current chi2=2.9228795669921075 (change=52.40645794323724 %)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,200 | INFO     | sum of square deviations: 21528267453.683655
[2025-11-24 17:04:31] 2025-11-24 22:03:43,204 | INFO     | sum of deviations: 566369263663.36
[2025-11-24 17:04:31] 2025-11-24 22:03:43,204 | INFO     | mean x: 1764008678.2530413
[2025-11-24 17:04:31] 2025-11-24 22:03:43,204 | INFO     | mean y: 3450838.111922141
[2025-11-24 17:04:31] 2025-11-24 22:03:43,204 | INFO     | intersect: -46404384736.55256
[2025-11-24 17:04:31] 2025-11-24 22:03:43,204 | INFO     | chi2: 2.350743617036168
[2025-11-24 17:04:31] 2025-11-24 22:03:43,205 | INFO     | current chi2=2.350743617036168 (change=19.574393567803284 %)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,205 | INFO     | right removable region: 410
[2025-11-24 17:04:31] 2025-11-24 22:03:43,205 | INFO     | sum of square deviations: 22323461624.0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,209 | INFO     | sum of deviations: 216164784196.00006
[2025-11-24 17:04:31] 2025-11-24 22:03:43,209 | INFO     | mean x: 1764009135.75
[2025-11-24 17:04:31] 2025-11-24 22:03:43,209 | INFO     | mean y: 3433025.7884615385
[2025-11-24 17:04:31] 2025-11-24 22:03:43,209 | INFO     | intersect: -17077997290.521307
[2025-11-24 17:04:31] 2025-11-24 22:03:43,210 | INFO     | chi2: 3.979393160113509
[2025-11-24 17:04:31] 2025-11-24 22:03:43,210 | INFO     | current chi2=3.979393160113509 (change=35.20314081186782 %)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,210 | INFO     | sum of square deviations: 21528191690.686066
[2025-11-24 17:04:31] 2025-11-24 22:03:43,214 | INFO     | sum of deviations: 184466249458.62766
[2025-11-24 17:04:31] 2025-11-24 22:03:43,214 | INFO     | mean x: 1764009288.2481751
[2025-11-24 17:04:31] 2025-11-24 22:03:43,214 | INFO     | mean y: 3439099.8369829683
[2025-11-24 17:04:31] 2025-11-24 22:03:43,214 | INFO     | intersect: -15111633363.685577
[2025-11-24 17:04:31] 2025-11-24 22:03:43,215 | INFO     | chi2: 3.9285288918784738
[2025-11-24 17:04:31] 2025-11-24 22:03:43,215 | INFO     | current chi2=3.9285288918784738 (change=1.27819157817481 %)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,215 | INFO     | left removable region: 20
[2025-11-24 17:04:31] 2025-11-24 22:03:43,215 | INFO     | sum of square deviations: 18394052101.343575
[2025-11-24 17:04:31] 2025-11-24 22:03:43,219 | INFO     | sum of deviations: 348758838081.24084
[2025-11-24 17:04:31] 2025-11-24 22:03:43,219 | INFO     | mean x: 1764009257.7589743
[2025-11-24 17:04:31] 2025-11-24 22:03:43,219 | INFO     | mean y: 3493501.5025641024
[2025-11-24 17:04:31] 2025-11-24 22:03:43,219 | INFO     | intersect: -33442851855.735733
[2025-11-24 17:04:31] 2025-11-24 22:03:43,220 | INFO     | chi2: 0.05404269289552222
[2025-11-24 17:04:31] 2025-11-24 22:03:43,220 | INFO     | current memory leak: 18.96 B/s (using 390 data points, chi2=0.05)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,220 | INFO     | could have reported an average CPU frequency of 2355 MHz (18 samples)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,220 | INFO     | ..............................
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . Timing measurements:
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . get job = 0 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . initial setup = 2 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . payload setup = 7 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . stage-in = 0 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . payload execution = 25637 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . stage-out = 3 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | . log creation = 0 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,221 | INFO     | ..............................
[2025-11-24 17:04:31] 2025-11-24 22:03:43,302 | INFO     | 
[2025-11-24 17:04:31] 2025-11-24 22:03:43,302 | INFO     | job summary report
[2025-11-24 17:04:31] 2025-11-24 22:03:43,302 | INFO     | --------------------------------------------------
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | PanDA job id: 6895346845
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | task id: 47556149
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | errors: (none)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | pilot state: finished 
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | transexitcode: 0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,303 | INFO     | exeerrorcode: 0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,304 | INFO     | exeerrordiag: 
[2025-11-24 17:04:31] 2025-11-24 22:03:43,304 | INFO     | exitcode: 0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,304 | INFO     | exitmsg: OK
[2025-11-24 17:04:31] 2025-11-24 22:03:43,304 | INFO     | cpuconsumptiontime: 294501 s
[2025-11-24 17:04:31] 2025-11-24 22:03:43,304 | INFO     | nevents: 1000
[2025-11-24 17:04:31] 2025-11-24 22:03:43,304 | INFO     | neventsw: 0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | pid: 13425
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | pgrp: 13425
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | corecount: 12
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | event service: False
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | sizes: {0: 2284136, 1: 2284335, 6: 2284597, 12: 2284625, 25649: 2321833, 25652: 2330827, 25656: 2331011, 25663: 2331257}
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | --------------------------------------------------
[2025-11-24 17:04:31] 2025-11-24 22:03:43,305 | INFO     | 
[2025-11-24 17:04:31] 2025-11-24 22:03:43,306 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:04:31] 2025-11-24 22:03:43,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,417 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,417 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,417 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,417 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:04:31] 2025-11-24 22:03:43,418 | INFO     | job 6895346845 has completed (purged errors)
[2025-11-24 17:04:31] 2025-11-24 22:03:43,419 | INFO     | overall cleanup function is called
[2025-11-24 17:04:31] 2025-11-24 22:03:44,436 | INFO     | --- collectZombieJob: --- 10, [13425]
[2025-11-24 17:04:31] 2025-11-24 22:03:44,436 | INFO     | zombie collector waiting for pid 13425
[2025-11-24 17:04:31] 2025-11-24 22:03:44,436 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:04:31] 2025-11-24 22:03:44,436 | INFO     | collected zombie processes
[2025-11-24 17:04:31] 2025-11-24 22:03:44,436 | INFO     | will attempt to kill all subprocesses of pid=13425
[2025-11-24 17:04:31] 2025-11-24 22:03:44,528 | INFO     | process IDs to be killed: [13425] (in reverse order)
[2025-11-24 17:04:31] 2025-11-24 22:03:44,577 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:04:31] 2025-11-24 22:03:44,578 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:04:31] 2025-11-24 22:03:44,581 | INFO     | did not find any defunct processes belonging to 13425
[2025-11-24 17:04:31] 2025-11-24 22:03:44,583 | INFO     | did not find any defunct processes belonging to 13425
[2025-11-24 17:04:31] 2025-11-24 22:03:44,585 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:04:31] 2025-11-24 22:03:44,585 | INFO     | ready for new job
[2025-11-24 17:04:31] 2025-11-24 22:03:44,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:04:31] 2025-11-24 22:03:44,587 | INFO     | ***************************************
[2025-11-24 17:04:31] 2025-11-24 22:03:44,588 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:04:31] 2025-11-24 22:03:44,588 | INFO     | ***************************************
[2025-11-24 17:04:31] 2025-11-24 22:03:44,588 | INFO     | 
[2025-11-24 17:04:31] 2025-11-24 22:03:44,588 | INFO     | architecture information:
[2025-11-24 17:04:31] 2025-11-24 22:03:44,589 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:04:31] 2025-11-24 22:03:44,603 | INFO     | cat /etc/os-release:
[2025-11-24 17:04:31] NAME="CentOS Linux"
[2025-11-24 17:04:31] VERSION="7 (Core)"
[2025-11-24 17:04:31] ID="centos"
[2025-11-24 17:04:31] ID_LIKE="rhel fedora"
[2025-11-24 17:04:31] VERSION_ID="7"
[2025-11-24 17:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:04:31] ANSI_COLOR="0;31"
[2025-11-24 17:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:04:31] HOME_URL="https://www.centos.org/"
[2025-11-24 17:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:04:31] 
[2025-11-24 17:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:04:31] 
[2025-11-24 17:04:31] 2025-11-24 22:03:44,604 | INFO     | ***************************************
[2025-11-24 17:04:31] 2025-11-24 22:03:45,107 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:04:31] 2025-11-24 22:03:45,124 | INFO     | sufficient remaining disk space (28243394560 B)
[2025-11-24 17:04:31] 2025-11-24 22:03:45,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:04:31] 2025-11-24 22:03:45,124 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:04:31] 2025-11-24 22:03:45,125 | INFO     | update_server=False
[2025-11-24 17:04:31] 2025-11-24 22:03:45,125 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:04:31] 2025-11-24 22:03:45,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:04:31] 2025-11-24 22:03:45,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:04:31] 2025-11-24 22:03:45,519 | INFO     | all data control threads have been joined
[2025-11-24 17:04:31] 2025-11-24 22:03:45,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:04:31] 2025-11-24 22:03:46,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:04:31] 2025-11-24 22:03:46,034 | INFO     | aborting loop
[2025-11-24 17:04:31] 2025-11-24 22:03:46,130 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:46,131 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:46,163 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:46,328 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:46,402 | INFO     | all payload control threads have been joined
[2025-11-24 17:04:31] 2025-11-24 22:03:46,525 | INFO     | [data] control thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:46,617 | INFO     | all job control threads have been joined
[2025-11-24 17:04:31] 2025-11-24 22:03:47,039 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,172 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,212 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,408 | INFO     | [payload] control thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,517 | INFO     | [job] validate thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,522 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,524 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,548 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:47,623 | INFO     | [job] control thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:49,904 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:03:55,185 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:04:31] 2025-11-24 22:03:56,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:04:31] 2025-11-24 22:04:15,307 | INFO     | PID=6954 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 17:04:31] 2025-11-24 22:04:15,307 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:04:31] 2025-11-24 22:04:15,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:04:31] 2025-11-24 22:04:15,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:04:31] 2025-11-24 22:04:25,765 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:04:31] 2025-11-24 22:04:26,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890555664192)>', '<ExcThread(monitor, started 139889299420928)>']
[2025-11-24 17:04:31] 2025-11-24 22:04:27,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:04:31] 2025-11-24 22:04:27,357 | INFO     | [monitor] control thread has ended
[2025-11-24 17:04:31] 2025-11-24 22:04:31,643 | INFO     | all workflow threads have been joined
[2025-11-24 17:04:31] 2025-11-24 22:04:31,643 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:04:31] 2025-11-24 22:04:31,644 | INFO     | traces error code: 0
[2025-11-24 17:04:31] 2025-11-24 22:04:31,644 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:04:31] 2025-11-24 22:04:31,741 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:04:31] 2025-11-24 22:04:31,745 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:04:31] 2025-11-24 22:04:31,749 [wrapper] pilotpid: 6954
[2025-11-24 17:04:31] 2025-11-24 22:04:31,753 [wrapper] Pilot exit status: 0
[2025-11-24 17:04:31] 2025-11-24 22:04:31,767 [wrapper] pandaids: 6895346845
[2025-11-24 17:04:31] 2025-11-24 22:04:31,814 [wrapper] cleanup supervisor_pilot 10021 6955
[2025-11-24 17:04:31] 2025-11-24 22:04:31,818 [wrapper] Test setup, not cleaning
[2025-11-24 17:04:31] 2025-11-24 22:04:31,822 [wrapper] apfmon messages muted
[2025-11-24 17:04:31] 2025-11-24 22:04:31,826 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:04:31] 2025-11-24 22:04:31,830 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:04:31]  *** Error codes and diagnostics ***
[2025-11-24 17:04:31]     "exeErrorCode": 0,
[2025-11-24 17:04:31]     "exeErrorDiag": "",
[2025-11-24 17:04:31]     "pilotErrorCode": 0,
[2025-11-24 17:04:31]     "pilotErrorDiag": "",
[2025-11-24 17:04:31]  *** Listing of results directory ***
[2025-11-24 17:04:31] total 1310900
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 13:28 pilot3.tar.gz
[2025-11-24 17:04:31] -rwx------ 1 boincer umatlas     36292 Nov 22 13:32 runpilot2-wrapper.sh
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 13:32 queuedata.json
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas       100 Nov 24 09:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:04:31] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 09:55 run_atlas
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas       105 Nov 24 09:55 job.xml
[2025-11-24 17:04:31] -rw-r--r-- 2 boincer umatlas 409183507 Nov 24 09:55 EVNT.47483658._001107.pool.root.1
[2025-11-24 17:04:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:55 start_atlas.sh
[2025-11-24 17:04:31] drwxrwx--x 2 boincer umatlas      4096 Nov 24 09:55 shared
[2025-11-24 17:04:31] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 09:55 input.tar.gz
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas         0 Nov 24 09:55 boinc_lockfile
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas      2784 Nov 24 09:55 pandaJob.out
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas        57 Nov 24 09:55 setup.sh.local
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas    988283 Nov 24 09:55 agis_schedconf.cvmfs.json
[2025-11-24 17:04:31] drwx------ 5 boincer umatlas      4096 Nov 24 09:55 pilot3
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas       532 Nov 24 16:53 boinc_task_state.xml
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 16:55 init_data.xml
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas 917659969 Nov 24 17:02 HITS.47556149._000940.pool.root.1
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas      1062 Nov 24 17:03 memory_monitor_summary.json
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas   1516227 Nov 24 17:03 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas   2191480 Nov 24 17:03 log.47556149._000940.job.log.tgz.1
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas      8681 Nov 24 17:03 heartbeat.json
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:04 wrapper_checkpoint.txt
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:04 boinc_mmap_file
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas        95 Nov 24 17:04 pilot_heartbeat.json
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas      4817 Nov 24 17:04 pilotlog.txt
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas   3609086 Nov 24 17:04 log.47556149._000940.job.log.1
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas       353 Nov 24 17:04 output.list
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:04 runtime_log
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas   5816320 Nov 24 17:04 result.tar.gz
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas       670 Nov 24 17:04 Uo7LDmka7g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7DIKDmokKkUm.diag
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 17:04 runtime_log.err
[2025-11-24 17:04:31] -rw-r--r-- 1 boincer umatlas     21277 Nov 24 17:04 stderr.txt
[2025-11-24 17:04:31] HITS file was successfully produced:
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas 917659969 Nov 24 17:02 shared/HITS.pool.root.1
[2025-11-24 17:04:31]  *** Contents of shared directory: ***
[2025-11-24 17:04:31] total 1302032
[2025-11-24 17:04:31] -rw-r--r-- 2 boincer umatlas 409183507 Nov 24 09:55 ATLAS.root_0
[2025-11-24 17:04:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 09:55 start_atlas.sh
[2025-11-24 17:04:31] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 09:55 input.tar.gz
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas 917659969 Nov 24 17:02 HITS.pool.root.1
[2025-11-24 17:04:31] -rw------- 1 boincer umatlas   5816320 Nov 24 17:04 result.tar.gz
17:04:33 (3276): run_atlas exited; CPU time 288014.403955
17:04:33 (3276): called boinc_finish(0)

</stderr_txt>
]]>

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