Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:52:12 (29040): wrapper (7.7.26015): starting
11:52:12 (29040): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 11:52:12] Arguments: --nthreads 8
[2025-11-26 11:52:12] Threads: 8
[2025-11-26 11:52:12] Checking for CVMFS
[2025-11-26 11:52:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:52:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:52:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:52:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:52:14] 2.11.2.0 4058 285246 139356 153318 1 130 25078956 25165824 1288 130560 8 146239143 99.882 84809576 3067 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 11:52:14] CVMFS is ok
[2025-11-26 11:52:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:52:14] Checking for apptainer binary...
[2025-11-26 11:52:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:52:14] Running /usr/bin/apptainer --version
[2025-11-26 11:52:15] apptainer version 1.3.2-1.el7
[2025-11-26 11:52:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:52:43] cg-vwn233.simple-grid.lan
[2025-11-26 11:52:43] apptainer works
[2025-11-26 11:52:43] Set ATHENA_PROC_NUMBER=8
[2025-11-26 11:52:43] Set ATHENA_CORE_NUMBER=8
[2025-11-26 11:52:43] Starting ATLAS job with PandaID=6895349974
[2025-11-26 11:52:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:08:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:08:55] 2025-11-27 10:07:59,802 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:08:55] 2025-11-27 10:08:00,296 | INFO     | time since job start (83502s) is within the limit (172800.0s)
[2025-11-27 11:08:55] 2025-11-27 10:08:02,304 | INFO     | time since job start (83504s) is within the limit (172800.0s)
[2025-11-27 11:08:55] 2025-11-27 10:08:02,305 | INFO     | monitor loop #5607: job 0:6895349974 is in state 'finished'
[2025-11-27 11:08:55] 2025-11-27 10:08:02,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:08:55] 2025-11-27 10:08:04,312 | INFO     | time since job start (83506s) is within the limit (172800.0s)
[2025-11-27 11:08:55] 2025-11-27 10:08:04,818 | INFO     | monitor loop #5608: job 0:6895349974 is in state 'finished'
[2025-11-27 11:08:55] 2025-11-27 10:08:04,819 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:08:55] 2025-11-27 10:08:06,318 | INFO     | time since job start (83508s) is within the limit (172800.0s)
[2025-11-27 11:08:55] 2025-11-27 10:08:07,324 | INFO     | monitor loop #5609: job 0:6895349974 is in state 'finished'
[2025-11-27 11:08:55] 2025-11-27 10:08:07,325 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:08:55] 2025-11-27 10:08:08,331 | INFO     | time since job start (83510s) is within the limit (172800.0s)
[2025-11-27 11:08:55] 2025-11-27 10:08:09,829 | INFO     | monitor loop #5610: job 0:6895349974 is in state 'finished'
[2025-11-27 11:08:55] 2025-11-27 10:08:09,830 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:08:55] 2025-11-27 10:08:09,916 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 11:08:55] 2025-11-27 10:08:09,917 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 11:08:55] 2025-11-27 10:08:09,919 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6895349974/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:08:55] 2025-11-27 10:08:09,919 | INFO     | extracted standard info from prmon json
[2025-11-27 11:08:55] 2025-11-27 10:08:09,920 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:08:55] 2025-11-27 10:08:09,920 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:08:55] 2025-11-27 10:08:09,945 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:08:55] 2025-11-27 10:08:09,947 | INFO     | sum of square deviations: 779999215056.797
[2025-11-27 11:08:55] 2025-11-27 10:08:10,001 | INFO     | sum of deviations: 3058491434495.8955
[2025-11-27 11:08:55] 2025-11-27 10:08:10,002 | INFO     | mean x: 1764196503.5985293
[2025-11-27 11:08:55] 2025-11-27 10:08:10,002 | INFO     | mean y: 2833170.0455882354
[2025-11-27 11:08:55] 2025-11-27 10:08:10,002 | INFO     | intersect: -6914840323.549923
[2025-11-27 11:08:55] 2025-11-27 10:08:10,004 | INFO     | chi2: 21.58985846718611
[2025-11-27 11:08:55] 2025-11-27 10:08:10,006 | INFO     | sum of square deviations: 771428310010.7411
[2025-11-27 11:08:55] 2025-11-27 10:08:10,072 | INFO     | sum of deviations: 3505907779273.168
[2025-11-27 11:08:55] 2025-11-27 10:08:10,072 | INFO     | mean x: 1764196351.102583
[2025-11-27 11:08:55] 2025-11-27 10:08:10,072 | INFO     | mean y: 2841129.78302583
[2025-11-27 11:08:55] 2025-11-27 10:08:10,072 | INFO     | intersect: -8014896398.425867
[2025-11-27 11:08:55] 2025-11-27 10:08:10,074 | INFO     | chi2: 18.36161267593805
[2025-11-27 11:08:55] 2025-11-27 10:08:10,074 | INFO     | current chi2=18.36161267593805 (change=14.952602844315033 %)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,074 | INFO     | right removable region: 1354
[2025-11-27 11:08:55] 2025-11-27 10:08:10,076 | INFO     | sum of square deviations: 771427398670.7413
[2025-11-27 11:08:55] 2025-11-27 10:08:10,136 | INFO     | sum of deviations: 2494986654704.43
[2025-11-27 11:08:55] 2025-11-27 10:08:10,136 | INFO     | mean x: 1764196656.102583
[2025-11-27 11:08:55] 2025-11-27 10:08:10,136 | INFO     | mean y: 2843194.594095941
[2025-11-27 11:08:55] 2025-11-27 10:08:10,136 | INFO     | intersect: -5703004330.182277
[2025-11-27 11:08:55] 2025-11-27 10:08:10,138 | INFO     | chi2: 17.013377339409914
[2025-11-27 11:08:55] 2025-11-27 10:08:10,138 | INFO     | current chi2=17.013377339409914 (change=21.197365118126537 %)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,138 | INFO     | left removable region: 10
[2025-11-27 11:08:55] 2025-11-27 10:08:10,140 | INFO     | sum of square deviations: 752792014801.258
[2025-11-27 11:08:55] 2025-11-27 10:08:10,191 | INFO     | sum of deviations: 2571961960429.8013
[2025-11-27 11:08:55] 2025-11-27 10:08:10,191 | INFO     | mean x: 1764196625.611607
[2025-11-27 11:08:55] 2025-11-27 10:08:10,192 | INFO     | mean y: 2861509.6279761903
[2025-11-27 11:08:55] 2025-11-27 10:08:10,192 | INFO     | intersect: -6024628849.697347
[2025-11-27 11:08:55] 2025-11-27 10:08:10,193 | INFO     | chi2: 9.884225992214722
[2025-11-27 11:08:55] 2025-11-27 10:08:10,194 | INFO     | current memory leak: 3.42 B/s (using 1344 data points, chi2=9.88)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,195 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,195 | INFO     | ..............................
[2025-11-27 11:08:55] 2025-11-27 10:08:10,195 | INFO     | . Timing measurements:
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . get job = 0 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . initial setup = 6 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . payload setup = 128 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . stage-in = 0 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . payload execution = 83096 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . stage-out = 4 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | . log creation = 1 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,196 | INFO     | ..............................
[2025-11-27 11:08:55] 2025-11-27 10:08:10,322 | INFO     | 
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | job summary report
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | --------------------------------------------------
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | PanDA job id: 6895349974
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | task id: 47556149
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | errors: (none)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | pilot state: finished 
[2025-11-27 11:08:55] 2025-11-27 10:08:10,323 | INFO     | transexitcode: 0
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | exeerrorcode: 0
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | exeerrordiag: 
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | exitcode: 0
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | exitmsg: OK
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | cpuconsumptiontime: 313647 s
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | nevents: 1000
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | neventsw: 0
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | pid: 7065
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | pgrp: 7065
[2025-11-27 11:08:55] 2025-11-27 10:08:10,324 | INFO     | corecount: 8
[2025-11-27 11:08:55] 2025-11-27 10:08:10,325 | INFO     | event service: False
[2025-11-27 11:08:55] 2025-11-27 10:08:10,325 | INFO     | sizes: {0: 2284028, 1: 2284283, 2: 2284311, 12: 2284311, 23: 2284339, 34: 2284367, 45: 2284523, 55: 2284551, 66: 2284579, 77: 2284607, 88: 2284663, 97: 2285233, 98
[2025-11-27 11:08:55] 2025-11-27 10:08:10,325 | INFO     | --------------------------------------------------
[2025-11-27 11:08:55] 2025-11-27 10:08:10,325 | INFO     | 
[2025-11-27 11:08:55] 2025-11-27 10:08:10,325 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-11-27 11:08:55] 2025-11-27 10:08:10,337 | INFO     | time since job start (83512s) is within the limit (172800.0s)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,696 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:08:55] 2025-11-27 10:08:10,697 | INFO     | job 6895349974 has completed (purged errors)
[2025-11-27 11:08:55] 2025-11-27 10:08:10,697 | INFO     | overall cleanup function is called
[2025-11-27 11:08:55] 2025-11-27 10:08:11,722 | INFO     | --- collectZombieJob: --- 10, [7065]
[2025-11-27 11:08:55] 2025-11-27 10:08:11,723 | INFO     | zombie collector waiting for pid 7065
[2025-11-27 11:08:55] 2025-11-27 10:08:11,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:08:55] 2025-11-27 10:08:11,723 | INFO     | collected zombie processes
[2025-11-27 11:08:55] 2025-11-27 10:08:11,723 | INFO     | will attempt to kill all subprocesses of pid=7065
[2025-11-27 11:08:55] 2025-11-27 10:08:11,845 | INFO     | process IDs to be killed: [7065] (in reverse order)
[2025-11-27 11:08:55] 2025-11-27 10:08:12,642 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:08:55] 2025-11-27 10:08:12,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:08:55] 2025-11-27 10:08:12,645 | INFO     | did not find any defunct processes belonging to 7065
[2025-11-27 11:08:55] 2025-11-27 10:08:12,648 | INFO     | did not find any defunct processes belonging to 7065
[2025-11-27 11:08:55] 2025-11-27 10:08:12,651 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:08:55] 2025-11-27 10:08:12,652 | INFO     | ready for new job
[2025-11-27 11:08:55] 2025-11-27 10:08:12,652 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:08:55] 2025-11-27 10:08:12,657 | INFO     | ***************************************
[2025-11-27 11:08:55] 2025-11-27 10:08:12,657 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:08:55] 2025-11-27 10:08:12,657 | INFO     | ***************************************
[2025-11-27 11:08:55] 2025-11-27 10:08:12,657 | INFO     | 
[2025-11-27 11:08:55] 2025-11-27 10:08:12,658 | INFO     | pilot is running in a VM
[2025-11-27 11:08:55] 2025-11-27 10:08:12,658 | INFO     | architecture information:
[2025-11-27 11:08:55] 2025-11-27 10:08:12,658 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:08:55] 2025-11-27 10:08:12,682 | INFO     | cat /etc/os-release:
[2025-11-27 11:08:55] NAME="CentOS Linux"
[2025-11-27 11:08:55] VERSION="7 (Core)"
[2025-11-27 11:08:55] ID="centos"
[2025-11-27 11:08:55] ID_LIKE="rhel fedora"
[2025-11-27 11:08:55] VERSION_ID="7"
[2025-11-27 11:08:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:08:55] ANSI_COLOR="0;31"
[2025-11-27 11:08:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:08:55] HOME_URL="https://www.centos.org/"
[2025-11-27 11:08:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:08:55] 
[2025-11-27 11:08:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:08:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:08:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:08:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:08:55] 
[2025-11-27 11:08:55] 2025-11-27 10:08:12,682 | INFO     | ***************************************
[2025-11-27 11:08:55] 2025-11-27 10:08:13,186 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-11-27 11:08:55] 2025-11-27 10:08:13,325 | INFO     | sufficient remaining disk space (495205744640 B)
[2025-11-27 11:08:55] 2025-11-27 10:08:13,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:08:55] 2025-11-27 10:08:13,326 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:08:55] 2025-11-27 10:08:13,326 | INFO     | update_server=False
[2025-11-27 11:08:55] 2025-11-27 10:08:13,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:08:55] 2025-11-27 10:08:13,346 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:08:55] 2025-11-27 10:08:13,347 | INFO     | aborting loop
[2025-11-27 11:08:55] 2025-11-27 10:08:13,443 | INFO     | all job control threads have been joined
[2025-11-27 11:08:55] 2025-11-27 10:08:13,517 | INFO     | all data control threads have been joined
[2025-11-27 11:08:55] 2025-11-27 10:08:13,774 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:08:55] 2025-11-27 10:08:14,332 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,353 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,450 | INFO     | [job] control thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,465 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,485 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,500 | INFO     | [job] validate thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,524 | INFO     | [data] control thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,572 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,607 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:14,709 | INFO     | all payload control threads have been joined
[2025-11-27 11:08:55] 2025-11-27 10:08:15,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:08:55] 2025-11-27 10:08:15,377 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:15,400 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:15,716 | INFO     | [payload] control thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:15,781 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:16,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:08:55] 2025-11-27 10:08:16,344 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:20,198 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:23,389 | INFO     | job.realtimelogging is not enabled
[2025-11-27 11:08:55] 2025-11-27 10:08:24,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:08:55] 2025-11-27 10:08:43,481 | INFO     | PID=388 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-27 11:08:55] 2025-11-27 10:08:43,482 | INFO     | .. there are 9 such processes running
[2025-11-27 11:08:55] 2025-11-27 10:08:43,483 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:08:55] 2025-11-27 10:08:43,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:08:55] 2025-11-27 10:08:43,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:08:55] 2025-11-27 10:08:43,813 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:08:55] 2025-11-27 10:08:45,168 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139929932441408)>', '<ExcThread(monitor, started 139929220802304)>']
[2025-11-27 11:08:55] 2025-11-27 10:08:45,495 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:08:55] 2025-11-27 10:08:45,496 | INFO     | [monitor] control thread has ended
[2025-11-27 11:08:55] 2025-11-27 10:08:50,194 | INFO     | all workflow threads have been joined
[2025-11-27 11:08:55] 2025-11-27 10:08:50,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:08:55] 2025-11-27 10:08:50,195 | INFO     | traces error code: 0
[2025-11-27 11:08:55] 2025-11-27 10:08:50,195 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:08:55] 2025-11-27 10:08:50,474 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:08:55] 2025-11-27 10:08:50,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:08:55] 2025-11-27 10:08:50,635 [wrapper] pilotpid: 388
[2025-11-27 11:08:55] 2025-11-27 10:08:50,746 [wrapper] Pilot exit status: 0
[2025-11-27 11:08:55] 2025-11-27 10:08:50,988 [wrapper] pandaids: 6895349974
[2025-11-27 11:08:55] 2025-11-27 10:08:51,993 [wrapper] cleanup supervisor_pilot  9618 389
[2025-11-27 11:08:55] 2025-11-27 10:08:52,039 [wrapper] Test setup, not cleaning
[2025-11-27 11:08:55] 2025-11-27 10:08:52,127 [wrapper] apfmon messages muted
[2025-11-27 11:08:55] 2025-11-27 10:08:52,209 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:08:55] 2025-11-27 10:08:52,295 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:08:55]  *** Error codes and diagnostics ***
[2025-11-27 11:08:55]     "exeErrorCode": 0,
[2025-11-27 11:08:55]     "exeErrorDiag": "",
[2025-11-27 11:08:55]     "pilotErrorCode": 0,
[2025-11-27 11:08:55]     "pilotErrorDiag": "",
[2025-11-27 11:08:55]  *** Listing of results directory ***
[2025-11-27 11:08:55] total 1316560
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc    576529 Nov 22 20:25 pilot3.tar.gz
[2025-11-27 11:08:55] -rwx------. 1 boinc boinc     36292 Nov 22 21:03 runpilot2-wrapper.sh
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc      5112 Nov 22 21:03 queuedata.json
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc       100 Nov 26 11:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:08:55] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 11:52 run_atlas
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc       105 Nov 26 11:52 job.xml
[2025-11-27 11:08:55] -rw-r--r--. 2 boinc boinc 409737226 Nov 26 11:52 EVNT.47483658._001112.pool.root.1
[2025-11-27 11:08:55] -rw-r--r--. 2 boinc boinc    590097 Nov 26 11:52 input.tar.gz
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc      6392 Nov 26 11:52 init_data.xml
[2025-11-27 11:08:55] -rw-r--r--. 2 boinc boinc     15847 Nov 26 11:52 start_atlas.sh
[2025-11-27 11:08:55] drwxrwx--x. 2 boinc boinc        68 Nov 26 11:52 shared
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc         0 Nov 26 11:52 boinc_lockfile
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc      2780 Nov 26 11:52 pandaJob.out
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc    991827 Nov 26 11:56 agis_schedconf.cvmfs.json
[2025-11-27 11:08:55] drwx------. 5 boinc boinc      4096 Nov 26 11:56 pilot3
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc       533 Nov 27 10:44 boinc_task_state.xml
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc 907375662 Nov 27 11:05 HITS.47556149._000981.pool.root.1
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc      1029 Nov 27 11:06 memory_monitor_summary.json
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc   1516240 Nov 27 11:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc   2444638 Nov 27 11:06 log.47556149._000981.job.log.tgz.1
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc      8621 Nov 27 11:08 heartbeat.json
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc        29 Nov 27 11:08 wrapper_checkpoint.txt
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc      8192 Nov 27 11:08 boinc_mmap_file
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc        95 Nov 27 11:08 pilot_heartbeat.json
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc      4954 Nov 27 11:08 pilotlog.txt
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc  11123867 Nov 27 11:08 log.47556149._000981.job.log.1
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc       353 Nov 27 11:08 output.list
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc       620 Nov 27 11:08 runtime_log
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc  13588480 Nov 27 11:08 result.tar.gz
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc      8817 Nov 27 11:08 runtime_log.err
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc       662 Nov 27 11:08 RDtLDmu08g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoMKKDmI0PPvn.diag
[2025-11-27 11:08:55] -rw-r--r--. 1 boinc boinc     21396 Nov 27 11:08 stderr.txt
[2025-11-27 11:08:55] HITS file was successfully produced:
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc 907375662 Nov 27 11:05 shared/HITS.pool.root.1
[2025-11-27 11:08:55]  *** Contents of shared directory: ***
[2025-11-27 11:08:55] total 1300116
[2025-11-27 11:08:55] -rw-r--r--. 2 boinc boinc 409737226 Nov 26 11:52 ATLAS.root_0
[2025-11-27 11:08:55] -rw-r--r--. 2 boinc boinc    590097 Nov 26 11:52 input.tar.gz
[2025-11-27 11:08:55] -rw-r--r--. 2 boinc boinc     15847 Nov 26 11:52 start_atlas.sh
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc 907375662 Nov 27 11:05 HITS.pool.root.1
[2025-11-27 11:08:55] -rw-------. 1 boinc boinc  13588480 Nov 27 11:08 result.tar.gz
11:08:56 (29040): run_atlas exited; CPU time 314214.912905
11:08:56 (29040): called boinc_finish(0)

</stderr_txt>
]]>

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