Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:02:35 (2444799): wrapper (7.7.26015): starting
13:02:35 (2444799): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 13:02:35] Arguments: --nthreads 8
[2025-11-24 13:02:35] Threads: 8
[2025-11-24 13:02:35] Checking for CVMFS
[2025-11-24 13:02:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 13:02:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 13:02:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 13:02:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 13:02:37] 2.13.3.0 11793 27505 360532 153254 3 404 24530902 32935931 30944 16776704 0 157730799 99.619 152067865 33745 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 13:02:37] CVMFS is ok
[2025-11-24 13:02:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 13:02:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 13:02:37] Further information can be found at the LHC@home message board.
[2025-11-24 13:02:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 13:02:37] Checking for apptainer binary...
[2025-11-24 13:02:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 13:02:37] Running /usr/bin/apptainer --version
[2025-11-24 13:02:37] apptainer version 1.4.4-1.el9
[2025-11-24 13:02:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 13:02:38] c6-2-11-2.aglt2.org
[2025-11-24 13:02:38] apptainer works
[2025-11-24 13:02:38] Set ATHENA_PROC_NUMBER=8
[2025-11-24 13:02:38] Set ATHENA_CORE_NUMBER=8
[2025-11-24 13:02:38] Starting ATLAS job with PandaID=6895344261
[2025-11-24 13:02:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 07:10:05]  *** The last 200 lines of the pilot log: ***
[2025-11-25 07:10:05] 2025-11-25 12:09:13,086 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2602.7532499999993
[2025-11-25 07:10:05] 2025-11-25 12:09:13,104 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895344261/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 07:10:05] 2025-11-25 12:09:13,105 | INFO     | extracted standard info from prmon json
[2025-11-25 07:10:05] 2025-11-25 12:09:13,105 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 07:10:05] 2025-11-25 12:09:13,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 07:10:05] 2025-11-25 12:09:13,201 | INFO     | fitting pss+swap vs Time
[2025-11-25 07:10:05] 2025-11-25 12:09:13,203 | INFO     | sum of square deviations: 374559075413.19507
[2025-11-25 07:10:05] 2025-11-25 12:09:13,627 | INFO     | time since job start (65135s) is within the limit (172800.0s)
[2025-11-25 07:10:05] 2025-11-25 12:09:13,830 | INFO     | sum of deviations: 2615884165794.287
[2025-11-25 07:10:05] 2025-11-25 12:09:13,830 | INFO     | mean x: 1764040005.801878
[2025-11-25 07:10:05] 2025-11-25 12:09:13,830 | INFO     | mean y: 2896264.257276995
[2025-11-25 07:10:05] 2025-11-25 12:09:13,830 | INFO     | intersect: -12316987625.658566
[2025-11-25 07:10:05] 2025-11-25 12:09:13,856 | INFO     | chi2: 9.161322790187167
[2025-11-25 07:10:05] 2025-11-25 12:09:13,858 | INFO     | sum of square deviations: 369308827356.88617
[2025-11-25 07:10:05] 2025-11-25 12:09:14,044 | INFO     | sum of deviations: 2963087211986.0938
[2025-11-25 07:10:05] 2025-11-25 12:09:14,045 | INFO     | mean x: 1764039853.3103774
[2025-11-25 07:10:05] 2025-11-25 12:09:14,045 | INFO     | mean y: 2906346.3188679246
[2025-11-25 07:10:05] 2025-11-25 12:09:14,045 | INFO     | intersect: -14150570482.781195
[2025-11-25 07:10:05] 2025-11-25 12:09:14,047 | INFO     | chi2: 6.211213924902467
[2025-11-25 07:10:05] 2025-11-25 12:09:14,047 | INFO     | current chi2=6.211213924902467 (change=32.201778420520306 %)
[2025-11-25 07:10:05] 2025-11-25 12:09:14,070 | INFO     | sum of square deviations: 364107818137.05725
[2025-11-25 07:10:05] 2025-11-25 12:09:14,374 | INFO     | sum of deviations: 3157168169871.6797
[2025-11-25 07:10:05] 2025-11-25 12:09:14,375 | INFO     | mean x: 1764039700.8180094
[2025-11-25 07:10:05] 2025-11-25 12:09:14,375 | INFO     | mean y: 2912027.2170616114
[2025-11-25 07:10:05] 2025-11-25 12:09:14,375 | INFO     | intersect: -15293024276.232927
[2025-11-25 07:10:05] 2025-11-25 12:09:14,377 | INFO     | chi2: 4.852557316315581
[2025-11-25 07:10:05] 2025-11-25 12:09:14,377 | INFO     | current chi2=4.852557316315581 (change=21.874252360551584 %)
[2025-11-25 07:10:05] 2025-11-25 12:09:14,377 | INFO     | right removable region: 1054
[2025-11-25 07:10:05] 2025-11-25 12:09:14,397 | INFO     | sum of square deviations: 369307656766.8856
[2025-11-25 07:10:05] 2025-11-25 12:09:14,554 | INFO     | sum of deviations: 2210316794374.9185
[2025-11-25 07:10:05] 2025-11-25 12:09:14,555 | INFO     | mean x: 1764040158.3103774
[2025-11-25 07:10:05] 2025-11-25 12:09:14,555 | INFO     | mean y: 2908040.40754717
[2025-11-25 07:10:05] 2025-11-25 12:09:14,576 | INFO     | intersect: -10554922311.662296
[2025-11-25 07:10:05] 2025-11-25 12:09:14,578 | INFO     | chi2: 5.483786253439247
[2025-11-25 07:10:05] 2025-11-25 12:09:14,579 | INFO     | current chi2=5.483786253439247 (change=40.14198190557139 %)
[2025-11-25 07:10:05] 2025-11-25 12:09:14,600 | INFO     | sum of square deviations: 364105735236.3257
[2025-11-25 07:10:05] 2025-11-25 12:09:14,788 | INFO     | sum of deviations: 2015448158864.7078
[2025-11-25 07:10:05] 2025-11-25 12:09:14,788 | INFO     | mean x: 1764040310.8161137
[2025-11-25 07:10:05] 2025-11-25 12:09:14,789 | INFO     | mean y: 2913746.158293839
[2025-11-25 07:10:05] 2025-11-25 12:09:14,789 | INFO     | intersect: -9761644876.599588
[2025-11-25 07:10:05] 2025-11-25 12:09:14,791 | INFO     | chi2: 4.564885984103626
[2025-11-25 07:10:05] 2025-11-25 12:09:14,791 | INFO     | current chi2=4.564885984103626 (change=16.756675531605882 %)
[2025-11-25 07:10:05] 2025-11-25 12:09:14,813 | INFO     | left removable region: 20
[2025-11-25 07:10:05] 2025-11-25 12:09:14,815 | INFO     | sum of square deviations: 342793269686.1698
[2025-11-25 07:10:05] 2025-11-25 12:09:14,911 | INFO     | monitor loop #3200: job 0:6895344261 is in state 'finished'
[2025-11-25 07:10:05] 2025-11-25 12:09:14,912 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 07:10:05] 2025-11-25 12:09:14,988 | INFO     | sum of deviations: 2421965719749.489
[2025-11-25 07:10:05] 2025-11-25 12:09:14,989 | INFO     | mean x: 1764040280.3404255
[2025-11-25 07:10:05] 2025-11-25 12:09:14,989 | INFO     | mean y: 2934629.160541586
[2025-11-25 07:10:05] 2025-11-25 12:09:14,989 | INFO     | intersect: -12460685473.86321
[2025-11-25 07:10:05] 2025-11-25 12:09:14,991 | INFO     | chi2: 0.07909253238858018
[2025-11-25 07:10:05] 2025-11-25 12:09:14,991 | INFO     | current memory leak: 7.07 B/s (using 1034 data points, chi2=0.08)
[2025-11-25 07:10:05] 2025-11-25 12:09:15,015 | INFO     | could have reported an average CPU frequency of 2617 MHz (39 samples)
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | ..............................
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . Timing measurements:
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . get job = 0 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . initial setup = 4 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . payload setup = 45 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . stage-in = 0 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . payload execution = 64968 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . stage-out = 26 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | . log creation = 4 s
[2025-11-25 07:10:05] 2025-11-25 12:09:15,016 | INFO     | ..............................
[2025-11-25 07:10:05] 2025-11-25 12:09:15,674 | INFO     | time since job start (65137s) is within the limit (172800.0s)
[2025-11-25 07:10:05] 2025-11-25 12:09:16,265 | INFO     | 
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | job summary report
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | --------------------------------------------------
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | PanDA job id: 6895344261
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | task id: 47556137
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | errors: (none)
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | pilot state: finished 
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | transexitcode: 0
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | exeerrorcode: 0
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | exeerrordiag: 
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | exitcode: 0
[2025-11-25 07:10:05] 2025-11-25 12:09:16,266 | INFO     | exitmsg: OK
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | cpuconsumptiontime: 256566 s
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | nevents: 1000
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | neventsw: 0
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | pid: 2459138
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | pgrp: 2459138
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | corecount: 8
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | event service: False
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 23: 2284315, 27: 2284605, 34: 2284633, 65019: 2337785, 65021: 2337784, 65047: 2346867, 65049: 2346923, 65075: 2347169}
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | --------------------------------------------------
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | 
[2025-11-25 07:10:05] 2025-11-25 12:09:16,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 07:10:05] 2025-11-25 12:09:16,633 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 07:10:05] 2025-11-25 12:09:16,634 | INFO     | job 6895344261 has completed (purged errors)
[2025-11-25 07:10:05] 2025-11-25 12:09:16,634 | INFO     | overall cleanup function is called
[2025-11-25 07:10:05] 2025-11-25 12:09:17,949 | INFO     | --- collectZombieJob: --- 10, [2459138]
[2025-11-25 07:10:05] 2025-11-25 12:09:17,949 | INFO     | zombie collector waiting for pid 2459138
[2025-11-25 07:10:05] 2025-11-25 12:09:17,950 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 07:10:05] 2025-11-25 12:09:17,950 | INFO     | collected zombie processes
[2025-11-25 07:10:05] 2025-11-25 12:09:17,950 | INFO     | will attempt to kill all subprocesses of pid=2459138
[2025-11-25 07:10:05] 2025-11-25 12:09:21,869 | INFO     | process IDs to be killed: [2459138] (in reverse order)
[2025-11-25 07:10:05] 2025-11-25 12:09:22,377 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 07:10:05] 2025-11-25 12:09:22,378 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 07:10:05] 2025-11-25 12:09:22,497 | INFO     | did not find any defunct processes belonging to 2459138
[2025-11-25 07:10:05] 2025-11-25 12:09:22,544 | INFO     | did not find any defunct processes belonging to 2459138
[2025-11-25 07:10:05] 2025-11-25 12:09:22,705 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 07:10:05] 2025-11-25 12:09:22,706 | INFO     | ready for new job
[2025-11-25 07:10:05] 2025-11-25 12:09:22,706 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 07:10:05] 2025-11-25 12:09:22,780 | INFO     | ***************************************
[2025-11-25 07:10:05] 2025-11-25 12:09:22,780 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 07:10:05] 2025-11-25 12:09:22,780 | INFO     | ***************************************
[2025-11-25 07:10:05] 2025-11-25 12:09:22,780 | INFO     | 
[2025-11-25 07:10:05] 2025-11-25 12:09:22,876 | INFO     | architecture information:
[2025-11-25 07:10:05] 2025-11-25 12:09:22,908 | INFO     | executing command: cat /etc/os-release
[2025-11-25 07:10:05] 2025-11-25 12:09:23,032 | INFO     | cat /etc/os-release:
[2025-11-25 07:10:05] NAME="CentOS Linux"
[2025-11-25 07:10:05] VERSION="7 (Core)"
[2025-11-25 07:10:05] ID="centos"
[2025-11-25 07:10:05] ID_LIKE="rhel fedora"
[2025-11-25 07:10:05] VERSION_ID="7"
[2025-11-25 07:10:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 07:10:05] ANSI_COLOR="0;31"
[2025-11-25 07:10:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 07:10:05] HOME_URL="https://www.centos.org/"
[2025-11-25 07:10:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 07:10:05] 
[2025-11-25 07:10:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 07:10:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 07:10:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 07:10:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 07:10:05] 
[2025-11-25 07:10:05] 2025-11-25 12:09:23,034 | INFO     | ***************************************
[2025-11-25 07:10:05] 2025-11-25 12:09:23,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 07:10:05] 2025-11-25 12:09:23,741 | INFO     | sufficient remaining disk space (88094015488 B)
[2025-11-25 07:10:05] 2025-11-25 12:09:23,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 07:10:05] 2025-11-25 12:09:23,741 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 07:10:05] 2025-11-25 12:09:23,742 | INFO     | update_server=False
[2025-11-25 07:10:05] 2025-11-25 12:09:23,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 07:10:05] 2025-11-25 12:09:23,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:10:05] 2025-11-25 12:09:23,742 | INFO     | aborting loop
[2025-11-25 07:10:05] 2025-11-25 12:09:23,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 07:10:05] 2025-11-25 12:09:23,967 | INFO     | all payload control threads have been joined
[2025-11-25 07:10:05] 2025-11-25 12:09:24,103 | INFO     | all job control threads have been joined
[2025-11-25 07:10:05] 2025-11-25 12:09:24,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 07:10:05] 2025-11-25 12:09:24,711 | INFO     | all data control threads have been joined
[2025-11-25 07:10:05] 2025-11-25 12:09:24,747 | INFO     | [job] retrieve thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:24,748 | INFO     | [job] job monitor thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:24,973 | INFO     | [payload] control thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:24,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 07:10:05] 2025-11-25 12:09:25,109 | INFO     | [job] control thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:25,294 | INFO     | [payload] validate_post thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:25,717 | INFO     | [data] control thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,004 | INFO     | [job] queue monitor thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,050 | INFO     | [payload] failed_post thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,134 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,158 | INFO     | [job] validate thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,166 | INFO     | [data] copytool_in thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,181 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,290 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,305 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:26,390 | INFO     | [data] copytool_out thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:27,792 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 07:10:05] 2025-11-25 12:09:39,923 | INFO     | [monitor] cgroup control has ended
[2025-11-25 07:10:05] 2025-11-25 12:09:41,164 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430228330304)>', '<ExcThread(monitor, started 140429500598016)>']
[2025-11-25 07:10:05] 2025-11-25 12:09:46,190 | INFO     | all workflow threads have been joined
[2025-11-25 07:10:05] 2025-11-25 12:09:46,191 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 07:10:05] 2025-11-25 12:09:46,191 | INFO     | traces error code: 0
[2025-11-25 07:10:05] 2025-11-25 12:09:46,191 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 07:10:05] 2025-11-25 12:09:57,091 | INFO     | PID=2450127 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 07:10:05] 2025-11-25 12:09:57,108 | INFO     | .. there are 38 such processes running
[2025-11-25 07:10:05] 2025-11-25 12:09:57,109 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 07:10:05] 2025-11-25 12:09:57,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 07:10:05] 2025-11-25 12:09:57,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 07:10:05] 2025-11-25 12:09:57,109 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 07:10:05] 2025-11-25 12:09:57,110 | INFO     | [monitor] control thread has ended
[2025-11-25 07:10:05] 2025-11-25 12:10:04,536 [wrapper] ==== pilot stdout END ====
[2025-11-25 07:10:05] 2025-11-25 12:10:04,555 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 07:10:05] 2025-11-25 12:10:04,594 [wrapper] pilotpid: 2450127
[2025-11-25 07:10:05] 2025-11-25 12:10:04,654 [wrapper] Pilot exit status: 0
[2025-11-25 07:10:05] 2025-11-25 12:10:04,753 [wrapper] pandaids: 6895344261
[2025-11-25 07:10:05] 2025-11-25 12:10:04,857 [wrapper] cleanup supervisor_pilot 2129857 2450128
[2025-11-25 07:10:05] 2025-11-25 12:10:04,861 [wrapper] Test setup, not cleaning
[2025-11-25 07:10:05] 2025-11-25 12:10:04,864 [wrapper] apfmon messages muted
[2025-11-25 07:10:05] 2025-11-25 12:10:04,866 [wrapper] ==== wrapper stdout END ====
[2025-11-25 07:10:05] 2025-11-25 12:10:04,868 [wrapper] ==== wrapper stderr END ====
[2025-11-25 07:10:05]  *** Error codes and diagnostics ***
[2025-11-25 07:10:05]     "exeErrorCode": 0,
[2025-11-25 07:10:05]     "exeErrorDiag": "",
[2025-11-25 07:10:05]     "pilotErrorCode": 0,
[2025-11-25 07:10:05]     "pilotErrorDiag": "",
[2025-11-25 07:10:05]  *** Listing of results directory ***
[2025-11-25 07:10:05] total 1306372
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 11:53 queuedata.json
[2025-11-25 07:10:05] -rwx------. 1 boincer umatlas     36292 Nov 22 11:54 runpilot2-wrapper.sh
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas       100 Nov 24 13:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 07:10:05] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 13:02 run_atlas
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas       105 Nov 24 13:02 job.xml
[2025-11-25 07:10:05] -rw-r--r--. 2 boincer umatlas 408453436 Nov 24 13:02 EVNT.47483658._000440.pool.root.1
[2025-11-25 07:10:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 13:02 start_atlas.sh
[2025-11-25 07:10:05] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 13:02 shared
[2025-11-25 07:10:05] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 13:02 input.tar.gz
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas         0 Nov 24 13:02 boinc_lockfile
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 13:02 pandaJob.out
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas        57 Nov 24 13:02 setup.sh.local
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas    991801 Nov 24 13:03 agis_schedconf.cvmfs.json
[2025-11-25 07:10:05] drwx------. 5 boincer umatlas      4096 Nov 24 13:03 pilot3
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas       533 Nov 25 06:55 boinc_task_state.xml
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas      6878 Nov 25 07:03 init_data.xml
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas 906633749 Nov 25 07:07 HITS.47556137._004356.pool.root.1
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas      1072 Nov 25 07:08 memory_monitor_summary.json
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas   1516240 Nov 25 07:08 agis_ddmendpoints.agis.ALL.json
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas   2120692 Nov 25 07:08 log.47556137._004356.job.log.tgz.1
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas      8665 Nov 25 07:09 heartbeat.json
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas        95 Nov 25 07:09 pilot_heartbeat.json
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas       823 Nov 25 07:09 pilotlog.txt
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas        29 Nov 25 07:10 wrapper_checkpoint.txt
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas   7236078 Nov 25 07:10 log.47556137._004356.job.log.1
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas       353 Nov 25 07:10 output.list
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas       620 Nov 25 07:10 runtime_log
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 07:10 boinc_mmap_file
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas   9379840 Nov 25 07:10 result.tar.gz
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 07:10 runtime_log.err
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas       666 Nov 25 07:10 MlFKDm435g8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYCIKDm8YAyjm.diag
[2025-11-25 07:10:05] -rw-r--r--. 1 boincer umatlas     21417 Nov 25 07:10 stderr.txt
[2025-11-25 07:10:05] HITS file was successfully produced:
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas 906633749 Nov 25 07:07 shared/HITS.pool.root.1
[2025-11-25 07:10:05]  *** Contents of shared directory: ***
[2025-11-25 07:10:05] total 1294036
[2025-11-25 07:10:05] -rw-r--r--. 2 boincer umatlas 408453436 Nov 24 13:02 ATLAS.root_0
[2025-11-25 07:10:05] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 13:02 start_atlas.sh
[2025-11-25 07:10:05] -rw-r--r--. 2 boincer umatlas    590101 Nov 24 13:02 input.tar.gz
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas 906633749 Nov 25 07:07 HITS.pool.root.1
[2025-11-25 07:10:05] -rw-------. 1 boincer umatlas   9379840 Nov 25 07:10 result.tar.gz
07:10:06 (2444799): run_atlas exited; CPU time 259240.852667
07:10:06 (2444799): called boinc_finish(0)

</stderr_txt>
]]>

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