Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:41:33 (11375): wrapper (7.7.26015): starting
18:41:33 (11375): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:41:33] Arguments: --nthreads 8
[2025-11-26 18:41:33] Threads: 8
[2025-11-26 18:41:33] Checking for CVMFS
[2025-11-26 18:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:41:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:41:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:41:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:41:36] 2.11.2.0 6410 285484 135912 153330 3 85 14901599 25165825 1288 130560 13 133947751 99.886 76710265 2973 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 18:41:36] CVMFS is ok
[2025-11-26 18:41:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:41:36] Checking for apptainer binary...
[2025-11-26 18:41:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:41:36] Running /usr/bin/apptainer --version
[2025-11-26 18:41:36] apptainer version 1.3.2-1.el7
[2025-11-26 18:41:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:41:53] cg-vwn284.simple-grid.lan
[2025-11-26 18:41:53] apptainer works
[2025-11-26 18:41:53] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:41:53] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:41:53] Starting ATLAS job with PandaID=6895352797
[2025-11-26 18:41:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:38:20]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:38:20] 2025-11-27 17:36:56,719 | INFO     | time since job start (85877s) is within the limit (172800.0s)
[2025-11-27 18:38:20] 2025-11-27 17:36:58,142 | INFO     | monitor loop #5779: job 0:6895352797 is in state 'finished'
[2025-11-27 18:38:20] 2025-11-27 17:36:58,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:38:20] 2025-11-27 17:36:58,727 | INFO     | time since job start (85879s) is within the limit (172800.0s)
[2025-11-27 18:38:20] 2025-11-27 17:37:00,658 | INFO     | monitor loop #5780: job 0:6895352797 is in state 'finished'
[2025-11-27 18:38:20] 2025-11-27 17:37:00,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:38:20] 2025-11-27 17:37:00,735 | INFO     | time since job start (85881s) is within the limit (172800.0s)
[2025-11-27 18:38:20] 2025-11-27 17:37:02,743 | INFO     | time since job start (85883s) is within the limit (172800.0s)
[2025-11-27 18:38:20] 2025-11-27 17:37:03,166 | INFO     | monitor loop #5781: job 0:6895352797 is in state 'finished'
[2025-11-27 18:38:20] 2025-11-27 17:37:03,166 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:38:20] 2025-11-27 17:37:04,750 | INFO     | time since job start (85885s) is within the limit (172800.0s)
[2025-11-27 18:38:20] 2025-11-27 17:37:05,677 | INFO     | monitor loop #5782: job 0:6895352797 is in state 'finished'
[2025-11-27 18:38:20] 2025-11-27 17:37:05,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,123 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:38:20] 2025-11-27 17:37:06,124 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 18:38:20] 2025-11-27 17:37:06,126 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6895352797/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,127 | INFO     | extracted standard info from prmon json
[2025-11-27 18:38:20] 2025-11-27 17:37:06,127 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:38:20] 2025-11-27 17:37:06,127 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:38:20] 2025-11-27 17:37:06,151 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:38:20] 2025-11-27 17:37:06,153 | INFO     | sum of square deviations: 849044701363.4247
[2025-11-27 18:38:20] 2025-11-27 17:37:06,225 | INFO     | sum of deviations: 2462794706959.0317
[2025-11-27 18:38:20] 2025-11-27 17:37:06,225 | INFO     | mean x: 1764222261.0571837
[2025-11-27 18:38:20] 2025-11-27 17:37:06,225 | INFO     | mean y: 2823669.2244460327
[2025-11-27 18:38:20] 2025-11-27 17:37:06,225 | INFO     | intersect: -5114595047.898118
[2025-11-27 18:38:20] 2025-11-27 17:37:06,227 | INFO     | chi2: 28.54858861374359
[2025-11-27 18:38:20] 2025-11-27 17:37:06,229 | INFO     | sum of square deviations: 839974219585.3177
[2025-11-27 18:38:20] 2025-11-27 17:37:06,300 | INFO     | sum of deviations: 2918004036938.173
[2025-11-27 18:38:20] 2025-11-27 17:37:06,300 | INFO     | mean x: 1764222108.5609756
[2025-11-27 18:38:20] 2025-11-27 17:37:06,300 | INFO     | mean y: 2831321.550932568
[2025-11-27 18:38:20] 2025-11-27 17:37:06,300 | INFO     | intersect: -6125936817.759335
[2025-11-27 18:38:20] 2025-11-27 17:37:06,302 | INFO     | chi2: 25.31393002976683
[2025-11-27 18:38:20] 2025-11-27 17:37:06,302 | INFO     | current chi2=25.31393002976683 (change=11.33036251893574 %)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,302 | INFO     | right removable region: 1393
[2025-11-27 18:38:20] 2025-11-27 17:37:06,304 | INFO     | sum of square deviations: 839973317395.3177
[2025-11-27 18:38:20] 2025-11-27 17:37:06,372 | INFO     | sum of deviations: 1877122331753.535
[2025-11-27 18:38:20] 2025-11-27 17:37:06,372 | INFO     | mean x: 1764222413.5609756
[2025-11-27 18:38:20] 2025-11-27 17:37:06,372 | INFO     | mean y: 2833514.693687231
[2025-11-27 18:38:20] 2025-11-27 17:37:06,372 | INFO     | intersect: -3939745638.8258476
[2025-11-27 18:38:20] 2025-11-27 17:37:06,374 | INFO     | chi2: 23.846152155547816
[2025-11-27 18:38:20] 2025-11-27 17:37:06,374 | INFO     | current chi2=23.846152155547816 (change=16.471695052315024 %)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,374 | INFO     | left removable region: 10
[2025-11-27 18:38:20] 2025-11-27 17:37:06,376 | INFO     | sum of square deviations: 820245259101.3363
[2025-11-27 18:38:20] 2025-11-27 17:37:06,444 | INFO     | sum of deviations: 1920922366062.568
[2025-11-27 18:38:20] 2025-11-27 17:37:06,444 | INFO     | mean x: 1764222383.0694144
[2025-11-27 18:38:20] 2025-11-27 17:37:06,445 | INFO     | mean y: 2851736.2545191613
[2025-11-27 18:38:20] 2025-11-27 17:37:06,445 | INFO     | intersect: -4128759140.7887335
[2025-11-27 18:38:20] 2025-11-27 17:37:06,446 | INFO     | chi2: 16.255359009211944
[2025-11-27 18:38:20] 2025-11-27 17:37:06,446 | INFO     | current memory leak: 2.34 B/s (using 1383 data points, chi2=16.26)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,448 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,448 | INFO     | ..............................
[2025-11-27 18:38:20] 2025-11-27 17:37:06,448 | INFO     | . Timing measurements:
[2025-11-27 18:38:20] 2025-11-27 17:37:06,448 | INFO     | . get job = 0 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | . initial setup = 8 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | . payload setup = 154 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | . stage-in = 0 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | . payload execution = 85465 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | . stage-out = 3 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | . log creation = 0 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,449 | INFO     | ..............................
[2025-11-27 18:38:20] 2025-11-27 17:37:06,573 | INFO     | 
[2025-11-27 18:38:20] 2025-11-27 17:37:06,573 | INFO     | job summary report
[2025-11-27 18:38:20] 2025-11-27 17:37:06,573 | INFO     | --------------------------------------------------
[2025-11-27 18:38:20] 2025-11-27 17:37:06,573 | INFO     | PanDA job id: 6895352797
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | task id: 47556137
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | errors: (none)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | pilot state: finished 
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | transexitcode: 0
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | exeerrorcode: 0
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | exeerrordiag: 
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | exitcode: 0
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | exitmsg: OK
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | cpuconsumptiontime: 320925 s
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | nevents: 1000
[2025-11-27 18:38:20] 2025-11-27 17:37:06,574 | INFO     | neventsw: 0
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | pid: 22021
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | pgrp: 22021
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | corecount: 8
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | event service: False
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284321, 33: 2284349, 44: 2284405, 55: 2284561, 66: 2284589, 76: 2284617, 83: 2284935, 87: 2284991, 85624: 2346300
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | --------------------------------------------------
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | 
[2025-11-27 18:38:20] 2025-11-27 17:37:06,575 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-11-27 18:38:20] 2025-11-27 17:37:06,757 | INFO     | time since job start (85887s) is within the limit (172800.0s)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | job 6895352797 has completed (purged errors)
[2025-11-27 18:38:20] 2025-11-27 17:37:06,939 | INFO     | overall cleanup function is called
[2025-11-27 18:38:20] 2025-11-27 17:37:07,928 | INFO     | PID=15180 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 18:38:20] 2025-11-27 17:37:07,929 | INFO     | .. there are 9 such processes running
[2025-11-27 18:38:20] 2025-11-27 17:37:07,960 | INFO     | --- collectZombieJob: --- 10, [22021]
[2025-11-27 18:38:20] 2025-11-27 17:37:07,960 | INFO     | zombie collector waiting for pid 22021
[2025-11-27 18:38:20] 2025-11-27 17:37:07,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:38:20] 2025-11-27 17:37:07,961 | INFO     | collected zombie processes
[2025-11-27 18:38:20] 2025-11-27 17:37:07,961 | INFO     | will attempt to kill all subprocesses of pid=22021
[2025-11-27 18:38:20] 2025-11-27 17:37:08,076 | INFO     | process IDs to be killed: [22021] (in reverse order)
[2025-11-27 18:38:20] 2025-11-27 17:37:08,852 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:38:20] 2025-11-27 17:37:08,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:38:20] 2025-11-27 17:37:08,855 | INFO     | did not find any defunct processes belonging to 22021
[2025-11-27 18:38:20] 2025-11-27 17:37:08,857 | INFO     | did not find any defunct processes belonging to 22021
[2025-11-27 18:38:20] 2025-11-27 17:37:08,905 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:38:20] 2025-11-27 17:37:08,905 | INFO     | ready for new job
[2025-11-27 18:38:20] 2025-11-27 17:37:08,906 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:38:20] 2025-11-27 17:37:08,910 | INFO     | ***************************************
[2025-11-27 18:38:20] 2025-11-27 17:37:08,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:38:20] 2025-11-27 17:37:08,911 | INFO     | ***************************************
[2025-11-27 18:38:20] 2025-11-27 17:37:08,911 | INFO     | 
[2025-11-27 18:38:20] 2025-11-27 17:37:08,911 | INFO     | pilot is running in a VM
[2025-11-27 18:38:20] 2025-11-27 17:37:08,912 | INFO     | architecture information:
[2025-11-27 18:38:20] 2025-11-27 17:37:08,926 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:38:20] 2025-11-27 17:37:09,092 | INFO     | cat /etc/os-release:
[2025-11-27 18:38:20] NAME="CentOS Linux"
[2025-11-27 18:38:20] VERSION="7 (Core)"
[2025-11-27 18:38:20] ID="centos"
[2025-11-27 18:38:20] ID_LIKE="rhel fedora"
[2025-11-27 18:38:20] VERSION_ID="7"
[2025-11-27 18:38:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:38:20] ANSI_COLOR="0;31"
[2025-11-27 18:38:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:38:20] HOME_URL="https://www.centos.org/"
[2025-11-27 18:38:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:38:20] 
[2025-11-27 18:38:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:38:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:38:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:38:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:38:20] 
[2025-11-27 18:38:20] 2025-11-27 17:37:09,092 | INFO     | ***************************************
[2025-11-27 18:38:20] 2025-11-27 17:37:09,595 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-11-27 18:38:20] 2025-11-27 17:37:09,867 | INFO     | sufficient remaining disk space (495464742912 B)
[2025-11-27 18:38:20] 2025-11-27 17:37:09,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:38:20] 2025-11-27 17:37:09,867 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:38:20] 2025-11-27 17:37:09,867 | INFO     | update_server=False
[2025-11-27 18:38:20] 2025-11-27 17:37:09,867 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:38:20] 2025-11-27 17:37:09,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:38:20] 2025-11-27 17:37:09,868 | INFO     | aborting loop
[2025-11-27 18:38:20] 2025-11-27 17:37:10,174 | INFO     | all payload control threads have been joined
[2025-11-27 18:38:20] 2025-11-27 17:37:10,233 | INFO     | all data control threads have been joined
[2025-11-27 18:38:20] 2025-11-27 17:37:10,692 | INFO     | all job control threads have been joined
[2025-11-27 18:38:20] 2025-11-27 17:37:10,873 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:10,874 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:10,909 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,080 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,088 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:38:20] 2025-11-27 17:37:11,181 | INFO     | [payload] control thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,233 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:38:20] 2025-11-27 17:37:11,239 | INFO     | [data] control thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,562 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:38:20] 2025-11-27 17:37:11,698 | INFO     | [job] control thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,774 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:11,998 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:12,109 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:12,291 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:12,328 | INFO     | [job] validate thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:12,594 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:13,240 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:15,096 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:38:20] 2025-11-27 17:37:40,109 | INFO     | PID=15180 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 18:38:20] 2025-11-27 17:37:40,109 | INFO     | .. there are 9 such processes running
[2025-11-27 18:38:20] 2025-11-27 17:37:40,110 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:38:20] 2025-11-27 17:37:40,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:38:20] 2025-11-27 17:37:40,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:38:20] 2025-11-27 17:38:08,341 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:38:20] 2025-11-27 17:38:10,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140548188051264)>', '<ExcThread(monitor, started 140547738023680)>']
[2025-11-27 18:38:20] 2025-11-27 17:38:11,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:38:20] 2025-11-27 17:38:11,295 | INFO     | [monitor] control thread has ended
[2025-11-27 18:38:20] 2025-11-27 17:38:15,451 | INFO     | all workflow threads have been joined
[2025-11-27 18:38:20] 2025-11-27 17:38:15,451 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:38:20] 2025-11-27 17:38:15,452 | INFO     | traces error code: 0
[2025-11-27 18:38:20] 2025-11-27 17:38:15,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:38:20] 2025-11-27 17:38:15,791 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:38:20] 2025-11-27 17:38:15,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:38:20] 2025-11-27 17:38:16,005 [wrapper] pilotpid: 15180
[2025-11-27 18:38:20] 2025-11-27 17:38:16,085 [wrapper] Pilot exit status: 0
[2025-11-27 18:38:20] 2025-11-27 17:38:16,541 [wrapper] pandaids: 6895352797
[2025-11-27 18:38:20] 2025-11-27 17:38:17,390 [wrapper] cleanup supervisor_pilot 27694 15181
[2025-11-27 18:38:20] 2025-11-27 17:38:17,497 [wrapper] Test setup, not cleaning
[2025-11-27 18:38:20] 2025-11-27 17:38:17,580 [wrapper] apfmon messages muted
[2025-11-27 18:38:20] 2025-11-27 17:38:17,687 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:38:20] 2025-11-27 17:38:17,767 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:38:20]  *** Error codes and diagnostics ***
[2025-11-27 18:38:20]     "exeErrorCode": 0,
[2025-11-27 18:38:20]     "exeErrorDiag": "",
[2025-11-27 18:38:20]     "pilotErrorCode": 0,
[2025-11-27 18:38:20]     "pilotErrorDiag": "",
[2025-11-27 18:38:20]  *** Listing of results directory ***
[2025-11-27 18:38:20] total 1340412
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc    576529 Nov 23 04:47 pilot3.tar.gz
[2025-11-27 18:38:20] -rwx------. 1 boinc boinc     36292 Nov 23 04:51 runpilot2-wrapper.sh
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc      5112 Nov 23 04:51 queuedata.json
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc       100 Nov 26 18:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:38:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 18:41 run_atlas
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc       105 Nov 26 18:41 job.xml
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc      6392 Nov 26 18:41 init_data.xml
[2025-11-27 18:38:20] -rw-r--r--. 2 boinc boinc 410422169 Nov 26 18:41 EVNT.47483658._000603.pool.root.1
[2025-11-27 18:38:20] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:41 start_atlas.sh
[2025-11-27 18:38:20] drwxrwx--x. 2 boinc boinc        68 Nov 26 18:41 shared
[2025-11-27 18:38:20] -rw-r--r--. 2 boinc boinc    590098 Nov 26 18:41 input.tar.gz
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc         0 Nov 26 18:41 boinc_lockfile
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc      2785 Nov 26 18:41 pandaJob.out
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc    991530 Nov 26 18:45 agis_schedconf.cvmfs.json
[2025-11-27 18:38:20] drwx------. 5 boinc boinc      4096 Nov 26 18:45 pilot3
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc       533 Nov 27 18:02 boinc_task_state.xml
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc 930373015 Nov 27 18:34 HITS.47556137._005983.pool.root.1
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc      1028 Nov 27 18:35 memory_monitor_summary.json
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc   1516240 Nov 27 18:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc   2474052 Nov 27 18:35 log.47556137._005983.job.log.tgz.1
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc      8629 Nov 27 18:37 heartbeat.json
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc        95 Nov 27 18:37 pilot_heartbeat.json
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc        29 Nov 27 18:38 wrapper_checkpoint.txt
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc      8192 Nov 27 18:38 boinc_mmap_file
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc      4885 Nov 27 18:38 pilotlog.txt
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc  11466918 Nov 27 18:38 log.47556137._005983.job.log.1
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc       353 Nov 27 18:38 output.list
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc       620 Nov 27 18:38 runtime_log
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc  13957120 Nov 27 18:38 result.tar.gz
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc      8833 Nov 27 18:38 runtime_log.err
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc       662 Nov 27 18:38 86ZLDmWJGh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPQIKDmW6Cl2m.diag
[2025-11-27 18:38:20] -rw-r--r--. 1 boinc boinc     21508 Nov 27 18:38 stderr.txt
[2025-11-27 18:38:20] HITS file was successfully produced:
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc 930373015 Nov 27 18:34 shared/HITS.pool.root.1
[2025-11-27 18:38:20]  *** Contents of shared directory: ***
[2025-11-27 18:38:20] total 1323600
[2025-11-27 18:38:20] -rw-r--r--. 2 boinc boinc 410422169 Nov 26 18:41 ATLAS.root_0
[2025-11-27 18:38:20] -rw-r--r--. 2 boinc boinc     15847 Nov 26 18:41 start_atlas.sh
[2025-11-27 18:38:20] -rw-r--r--. 2 boinc boinc    590098 Nov 26 18:41 input.tar.gz
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc 930373015 Nov 27 18:34 HITS.pool.root.1
[2025-11-27 18:38:20] -rw-------. 1 boinc boinc  13957120 Nov 27 18:38 result.tar.gz
18:38:21 (11375): run_atlas exited; CPU time 321512.599271
18:38:21 (11375): called boinc_finish(0)

</stderr_txt>
]]>

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