Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:58:55 (3667): wrapper (7.7.26015): starting
00:58:55 (3667): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 00:58:55] Arguments: --nthreads 8
[2025-11-26 00:58:55] Threads: 8
[2025-11-26 00:58:55] Checking for CVMFS
[2025-11-26 00:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:58:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:58:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:58:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:58:57] 2.11.2.0 21973 81839 93796 153302 0 61 14453486 25165824 4632 130560 11 25700384 99.875 14565966 1995 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 00:58:57] CVMFS is ok
[2025-11-26 00:58:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:58:57] Checking for apptainer binary...
[2025-11-26 00:58:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:58:57] Running /usr/bin/apptainer --version
[2025-11-26 00:58:57] apptainer version 1.3.2-1.el7
[2025-11-26 00:58:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:59:09] cg-vwn333.simple-grid.lan
[2025-11-26 00:59:09] apptainer works
[2025-11-26 00:59:09] Set ATHENA_PROC_NUMBER=8
[2025-11-26 00:59:09] Set ATHENA_CORE_NUMBER=8
[2025-11-26 00:59:10] Starting ATLAS job with PandaID=6895355112
[2025-11-26 00:59:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:59:50]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:59:50] 2025-11-26 23:59:02,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:59:50] 2025-11-26 23:59:03,421 | INFO     | time since job start (86152s) is within the limit (172800.0s)
[2025-11-27 00:59:50] 2025-11-26 23:59:03,421 | INFO     | 86167s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 00:59:50] 2025-11-26 23:59:05,431 | INFO     | time since job start (86154s) is within the limit (172800.0s)
[2025-11-27 00:59:50] 2025-11-26 23:59:05,465 | INFO     | monitor loop #5811: job 0:6895355112 is in state 'finished'
[2025-11-27 00:59:50] 2025-11-26 23:59:05,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:59:50] 2025-11-26 23:59:06,640 | INFO     | PID=7492 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 00:59:50] 2025-11-26 23:59:06,640 | INFO     | .. there are 9 such processes running
[2025-11-27 00:59:50] 2025-11-26 23:59:07,641 | INFO     | time since job start (86156s) is within the limit (172800.0s)
[2025-11-27 00:59:50] 2025-11-26 23:59:07,975 | INFO     | monitor loop #5812: job 0:6895355112 is in state 'finished'
[2025-11-27 00:59:50] 2025-11-26 23:59:07,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:59:50] 2025-11-26 23:59:09,648 | INFO     | time since job start (86158s) is within the limit (172800.0s)
[2025-11-27 00:59:50] 2025-11-26 23:59:10,480 | INFO     | monitor loop #5813: job 0:6895355112 is in state 'finished'
[2025-11-27 00:59:50] 2025-11-26 23:59:10,480 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:59:50] 2025-11-26 23:59:11,660 | INFO     | time since job start (86160s) is within the limit (172800.0s)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,449 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:59:50] 2025-11-26 23:59:12,450 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 00:59:50] 2025-11-26 23:59:12,452 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895355112/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,452 | INFO     | extracted standard info from prmon json
[2025-11-27 00:59:50] 2025-11-26 23:59:12,452 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:59:50] 2025-11-26 23:59:12,452 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:59:50] 2025-11-26 23:59:12,488 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:59:50] 2025-11-26 23:59:12,491 | INFO     | sum of square deviations: 856350697758.7675
[2025-11-27 00:59:50] 2025-11-26 23:59:12,575 | INFO     | sum of deviations: 3367008623558.4443
[2025-11-27 00:59:50] 2025-11-26 23:59:12,575 | INFO     | mean x: 1764158682.0933714
[2025-11-27 00:59:50] 2025-11-26 23:59:12,575 | INFO     | mean y: 2833796.950819672
[2025-11-27 00:59:50] 2025-11-26 23:59:12,575 | INFO     | intersect: -6933503747.328443
[2025-11-27 00:59:50] 2025-11-26 23:59:12,577 | INFO     | chi2: 25.517011050139516
[2025-11-27 00:59:50] 2025-11-26 23:59:12,579 | INFO     | sum of square deviations: 847228194570.27
[2025-11-27 00:59:50] 2025-11-26 23:59:12,647 | INFO     | sum of deviations: 3825899381098.5825
[2025-11-27 00:59:50] 2025-11-26 23:59:12,647 | INFO     | mean x: 1764158529.597282
[2025-11-27 00:59:50] 2025-11-26 23:59:12,647 | INFO     | mean y: 2841467.0472103003
[2025-11-27 00:59:50] 2025-11-26 23:59:12,648 | INFO     | intersect: -7963717093.919349
[2025-11-27 00:59:50] 2025-11-26 23:59:12,649 | INFO     | chi2: 22.357740983164515
[2025-11-27 00:59:50] 2025-11-26 23:59:12,649 | INFO     | current chi2=22.357740983164515 (change=12.381034991783363 %)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,649 | INFO     | right removable region: 1397
[2025-11-27 00:59:50] 2025-11-26 23:59:12,651 | INFO     | sum of square deviations: 847227258830.2689
[2025-11-27 00:59:50] 2025-11-26 23:59:12,715 | INFO     | sum of deviations: 2765575194126.3145
[2025-11-27 00:59:50] 2025-11-26 23:59:12,715 | INFO     | mean x: 1764158834.597282
[2025-11-27 00:59:50] 2025-11-26 23:59:12,715 | INFO     | mean y: 2843850.137339056
[2025-11-27 00:59:50] 2025-11-26 23:59:12,716 | INFO     | intersect: -5755839974.787207
[2025-11-27 00:59:50] 2025-11-26 23:59:12,717 | INFO     | chi2: 20.528621202761386
[2025-11-27 00:59:50] 2025-11-26 23:59:12,717 | INFO     | current chi2=20.528621202761386 (change=19.549271807643223 %)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,717 | INFO     | left removable region: 10
[2025-11-27 00:59:50] 2025-11-26 23:59:12,719 | INFO     | sum of square deviations: 827385374779.4203
[2025-11-27 00:59:50] 2025-11-26 23:59:12,791 | INFO     | sum of deviations: 2800551380539.05
[2025-11-27 00:59:50] 2025-11-26 23:59:12,792 | INFO     | mean x: 1764158804.1059842
[2025-11-27 00:59:50] 2025-11-26 23:59:12,792 | INFO     | mean y: 2862199.1629416007
[2025-11-27 00:59:50] 2025-11-26 23:59:12,792 | INFO     | intersect: -5968499544.626999
[2025-11-27 00:59:50] 2025-11-26 23:59:12,794 | INFO     | chi2: 12.88612756721109
[2025-11-27 00:59:50] 2025-11-26 23:59:12,794 | INFO     | current memory leak: 3.38 B/s (using 1387 data points, chi2=12.89)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | ..............................
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | . Timing measurements:
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | . get job = 0 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | . initial setup = 14 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | . payload setup = 167 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,795 | INFO     | . stage-in = 0 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,796 | INFO     | . payload execution = 85690 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,796 | INFO     | . stage-out = 7 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,796 | INFO     | . log creation = 2 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,796 | INFO     | ..............................
[2025-11-27 00:59:50] 2025-11-26 23:59:12,937 | INFO     | 
[2025-11-27 00:59:50] 2025-11-26 23:59:12,937 | INFO     | job summary report
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | --------------------------------------------------
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | PanDA job id: 6895355112
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | task id: 47556149
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | errors: (none)
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | pilot state: finished 
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | transexitcode: 0
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | exeerrorcode: 0
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | exeerrordiag: 
[2025-11-27 00:59:50] 2025-11-26 23:59:12,938 | INFO     | exitcode: 0
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | exitmsg: OK
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | cpuconsumptiontime: 317549 s
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | nevents: 1000
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | neventsw: 0
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | pid: 14074
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | pgrp: 14074
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | corecount: 8
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | event service: False
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | sizes: {0: 2284037, 1: 2284292, 2: 2284292, 12: 2284320, 23: 2284348, 34: 2284376, 45: 2284532, 55: 2284560, 66: 2284588, 77: 2284616, 88: 2284672, 98: 2284980, 10
[2025-11-27 00:59:50] 2025-11-26 23:59:12,939 | INFO     | --------------------------------------------------
[2025-11-27 00:59:50] 2025-11-26 23:59:12,940 | INFO     | 
[2025-11-27 00:59:50] 2025-11-26 23:59:12,940 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:59:50] 2025-11-26 23:59:13,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,487 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:59:50] 2025-11-26 23:59:13,487 | INFO     | job 6895355112 has completed (purged errors)
[2025-11-27 00:59:50] 2025-11-26 23:59:13,487 | INFO     | overall cleanup function is called
[2025-11-27 00:59:50] 2025-11-26 23:59:14,502 | INFO     | --- collectZombieJob: --- 10, [14074]
[2025-11-27 00:59:50] 2025-11-26 23:59:14,502 | INFO     | zombie collector waiting for pid 14074
[2025-11-27 00:59:50] 2025-11-26 23:59:14,502 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:59:50] 2025-11-26 23:59:14,503 | INFO     | collected zombie processes
[2025-11-27 00:59:50] 2025-11-26 23:59:14,503 | INFO     | will attempt to kill all subprocesses of pid=14074
[2025-11-27 00:59:50] 2025-11-26 23:59:14,634 | INFO     | process IDs to be killed: [14074] (in reverse order)
[2025-11-27 00:59:50] 2025-11-26 23:59:15,261 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:59:50] 2025-11-26 23:59:15,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:59:50] 2025-11-26 23:59:15,264 | INFO     | did not find any defunct processes belonging to 14074
[2025-11-27 00:59:50] 2025-11-26 23:59:15,267 | INFO     | did not find any defunct processes belonging to 14074
[2025-11-27 00:59:50] 2025-11-26 23:59:15,321 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:59:50] 2025-11-26 23:59:15,322 | INFO     | ready for new job
[2025-11-27 00:59:50] 2025-11-26 23:59:15,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:59:50] 2025-11-26 23:59:15,327 | INFO     | ***************************************
[2025-11-27 00:59:50] 2025-11-26 23:59:15,327 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:59:50] 2025-11-26 23:59:15,327 | INFO     | ***************************************
[2025-11-27 00:59:50] 2025-11-26 23:59:15,327 | INFO     | 
[2025-11-27 00:59:50] 2025-11-26 23:59:15,328 | INFO     | pilot is running in a VM
[2025-11-27 00:59:50] 2025-11-26 23:59:15,328 | INFO     | architecture information:
[2025-11-27 00:59:50] 2025-11-26 23:59:15,336 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:59:50] 2025-11-26 23:59:15,633 | INFO     | cat /etc/os-release:
[2025-11-27 00:59:50] NAME="CentOS Linux"
[2025-11-27 00:59:50] VERSION="7 (Core)"
[2025-11-27 00:59:50] ID="centos"
[2025-11-27 00:59:50] ID_LIKE="rhel fedora"
[2025-11-27 00:59:50] VERSION_ID="7"
[2025-11-27 00:59:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:59:50] ANSI_COLOR="0;31"
[2025-11-27 00:59:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:59:50] HOME_URL="https://www.centos.org/"
[2025-11-27 00:59:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:59:50] 
[2025-11-27 00:59:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:59:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:59:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:59:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:59:50] 
[2025-11-27 00:59:50] 2025-11-26 23:59:15,634 | INFO     | ***************************************
[2025-11-27 00:59:50] 2025-11-26 23:59:16,137 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 00:59:50] 2025-11-26 23:59:16,325 | INFO     | sufficient remaining disk space (495592669184 B)
[2025-11-27 00:59:50] 2025-11-26 23:59:16,325 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:59:50] 2025-11-26 23:59:16,325 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:59:50] 2025-11-26 23:59:16,325 | INFO     | update_server=False
[2025-11-27 00:59:50] 2025-11-26 23:59:16,325 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:59:50] 2025-11-26 23:59:16,326 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:59:50] 2025-11-26 23:59:16,454 | INFO     | all data control threads have been joined
[2025-11-27 00:59:50] 2025-11-26 23:59:16,551 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:59:50] 2025-11-26 23:59:16,551 | INFO     | aborting loop
[2025-11-27 00:59:50] 2025-11-26 23:59:17,288 | INFO     | all job control threads have been joined
[2025-11-27 00:59:50] 2025-11-26 23:59:17,331 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,403 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,460 | INFO     | [data] control thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,487 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,557 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,588 | INFO     | all payload control threads have been joined
[2025-11-27 00:59:50] 2025-11-26 23:59:17,635 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,751 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,840 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:17,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:59:50] 2025-11-26 23:59:18,084 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:18,294 | INFO     | [job] control thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:18,332 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:18,593 | INFO     | [payload] control thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:18,778 | INFO     | [job] validate thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:18,960 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:19,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:59:50] 2025-11-26 23:59:23,766 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:27,030 | INFO     | job.realtimelogging is not enabled
[2025-11-27 00:59:50] 2025-11-26 23:59:28,036 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:59:50] 2025-11-26 23:59:40,458 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:59:50] 2025-11-26 23:59:41,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140654497146688)>', '<ExcThread(monitor, started 140653904246528)>']
[2025-11-27 00:59:50] 2025-11-26 23:59:44,807 | INFO     | PID=7492 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 00:59:50] 2025-11-26 23:59:44,807 | INFO     | .. there are 9 such processes running
[2025-11-27 00:59:50] 2025-11-26 23:59:44,808 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:59:50] 2025-11-26 23:59:44,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:59:50] 2025-11-26 23:59:44,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:59:50] 2025-11-26 23:59:44,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:59:50] 2025-11-26 23:59:44,808 | INFO     | [monitor] control thread has ended
[2025-11-27 00:59:50] 2025-11-26 23:59:46,105 | INFO     | all workflow threads have been joined
[2025-11-27 00:59:50] 2025-11-26 23:59:46,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:59:50] 2025-11-26 23:59:46,106 | INFO     | traces error code: 0
[2025-11-27 00:59:50] 2025-11-26 23:59:46,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:59:50] 2025-11-26 23:59:46,395 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:59:50] 2025-11-26 23:59:46,505 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:59:50] 2025-11-26 23:59:46,607 [wrapper] pilotpid: 7492
[2025-11-27 00:59:50] 2025-11-26 23:59:46,666 [wrapper] Pilot exit status: 0
[2025-11-27 00:59:50] 2025-11-26 23:59:47,030 [wrapper] pandaids: 6895355112
[2025-11-27 00:59:50] 2025-11-26 23:59:47,941 [wrapper] cleanup supervisor_pilot 28234 7493
[2025-11-27 00:59:50] 2025-11-26 23:59:48,031 [wrapper] Test setup, not cleaning
[2025-11-27 00:59:50] 2025-11-26 23:59:48,133 [wrapper] apfmon messages muted
[2025-11-27 00:59:50] 2025-11-26 23:59:48,237 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:59:50] 2025-11-26 23:59:48,340 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:59:50]  *** Error codes and diagnostics ***
[2025-11-27 00:59:50]     "exeErrorCode": 0,
[2025-11-27 00:59:50]     "exeErrorDiag": "",
[2025-11-27 00:59:50]     "pilotErrorCode": 0,
[2025-11-27 00:59:50]     "pilotErrorDiag": "",
[2025-11-27 00:59:50]  *** Listing of results directory ***
[2025-11-27 00:59:50] total 1316464
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc    576529 Nov 23 06:47 pilot3.tar.gz
[2025-11-27 00:59:50] -rwx------. 1 boinc boinc     36292 Nov 23 06:58 runpilot2-wrapper.sh
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc      5112 Nov 23 06:58 queuedata.json
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc       100 Nov 26 00:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:59:50] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 00:58 run_atlas
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc       105 Nov 26 00:58 job.xml
[2025-11-27 00:59:50] -rw-r--r--. 2 boinc boinc 407263094 Nov 26 00:58 EVNT.47483658._001143.pool.root.1
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc      6390 Nov 26 00:58 init_data.xml
[2025-11-27 00:59:50] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:58 start_atlas.sh
[2025-11-27 00:59:50] drwxrwx--x. 2 boinc boinc        68 Nov 26 00:58 shared
[2025-11-27 00:59:50] -rw-r--r--. 2 boinc boinc    590102 Nov 26 00:58 input.tar.gz
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc         0 Nov 26 00:58 boinc_lockfile
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc      2785 Nov 26 00:59 pandaJob.out
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc    991877 Nov 26 01:02 agis_schedconf.cvmfs.json
[2025-11-27 00:59:50] drwx------. 5 boinc boinc      4096 Nov 26 01:03 pilot3
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc       533 Nov 27 00:33 boinc_task_state.xml
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc 908892388 Nov 27 00:56 HITS.47556149._001297.pool.root.1
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc      1032 Nov 27 00:57 memory_monitor_summary.json
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc   1516240 Nov 27 00:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc   2494590 Nov 27 00:57 log.47556149._001297.job.log.tgz.1
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc        95 Nov 27 00:58 pilot_heartbeat.json
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc      7961 Nov 27 00:59 heartbeat.json
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc      8192 Nov 27 00:59 boinc_mmap_file
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc        29 Nov 27 00:59 wrapper_checkpoint.txt
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc      4955 Nov 27 00:59 pilotlog.txt
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc  11504919 Nov 27 00:59 log.47556149._001297.job.log.1
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc       353 Nov 27 00:59 output.list
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc       620 Nov 27 00:59 runtime_log
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc  14018560 Nov 27 00:59 result.tar.gz
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc      8817 Nov 27 00:59 runtime_log.err
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc       662 Nov 27 00:59 3mRNDmNIIh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm5gKKDmy8m8rn.diag
[2025-11-27 00:59:50] -rw-r--r--. 1 boinc boinc     21429 Nov 27 00:59 stderr.txt
[2025-11-27 00:59:50] HITS file was successfully produced:
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc 908892388 Nov 27 00:56 shared/HITS.pool.root.1
[2025-11-27 00:59:50]  *** Contents of shared directory: ***
[2025-11-27 00:59:50] total 1299600
[2025-11-27 00:59:50] -rw-r--r--. 2 boinc boinc 407263094 Nov 26 00:58 ATLAS.root_0
[2025-11-27 00:59:50] -rw-r--r--. 2 boinc boinc     15847 Nov 26 00:58 start_atlas.sh
[2025-11-27 00:59:50] -rw-r--r--. 2 boinc boinc    590102 Nov 26 00:58 input.tar.gz
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc 908892388 Nov 27 00:56 HITS.pool.root.1
[2025-11-27 00:59:50] -rw-------. 1 boinc boinc  14018560 Nov 27 00:59 result.tar.gz
00:59:52 (3667): run_atlas exited; CPU time 318195.325753
00:59:52 (3667): called boinc_finish(0)

</stderr_txt>
]]>

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