Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:09:54 (32586): wrapper (7.7.26015): starting
07:09:54 (32586): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 07:09:54] Arguments: --nthreads 8
[2025-11-24 07:09:54] Threads: 8
[2025-11-24 07:09:54] Checking for CVMFS
[2025-11-24 07:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:09:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:09:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:09:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:09:55] 2.11.2.0 21766 114800 141248 153245 1 49 16253491 18432001 1765 130560 0 83162616 99.974 4779779 26956 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 07:09:55] CVMFS is ok
[2025-11-24 07:09:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:09:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 07:09:55] Further information can be found at the LHC@home message board.
[2025-11-24 07:09:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:09:55] Checking for apptainer binary...
[2025-11-24 07:09:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 07:09:55] Running /usr/bin/apptainer --version
[2025-11-24 07:09:55] apptainer version 1.3.2-1.el7
[2025-11-24 07:09:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:09:56] c-206-18.aglt2.org
[2025-11-24 07:09:56] apptainer works
[2025-11-24 07:09:56] Set ATHENA_PROC_NUMBER=8
[2025-11-24 07:09:56] Set ATHENA_CORE_NUMBER=8
[2025-11-24 07:09:56] Starting ATLAS job with PandaID=6895344029
[2025-11-24 07:09:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 02:04:04]  *** The last 200 lines of the pilot log: ***
[2025-11-25 02:04:04] 2025-11-25 07:03:11,179 | INFO     | time since job start (67985s) is within the limit (172800.0s)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,208 | INFO     | monitor loop #4860: job 0:6895344029 is in state 'finished'
[2025-11-25 02:04:04] 2025-11-25 07:03:12,208 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,244 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 02:04:04] 2025-11-25 07:03:12,250 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2500.125
[2025-11-25 02:04:04] 2025-11-25 07:03:12,255 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895344029/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,256 | INFO     | extracted standard info from prmon json
[2025-11-25 02:04:04] 2025-11-25 07:03:12,256 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 02:04:04] 2025-11-25 07:03:12,256 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 02:04:04] 2025-11-25 07:03:12,285 | INFO     | fitting pss+swap vs Time
[2025-11-25 02:04:04] 2025-11-25 07:03:12,287 | INFO     | sum of square deviations: 428679604310.7244
[2025-11-25 02:04:04] 2025-11-25 07:03:12,326 | INFO     | sum of deviations: 2109547302730.3506
[2025-11-25 02:04:04] 2025-11-25 07:03:12,327 | INFO     | mean x: 1764020176.0960503
[2025-11-25 02:04:04] 2025-11-25 07:03:12,327 | INFO     | mean y: 2870095.7163375225
[2025-11-25 02:04:04] 2025-11-25 07:03:12,327 | INFO     | intersect: -8677934792.187784
[2025-11-25 02:04:04] 2025-11-25 07:03:12,329 | INFO     | chi2: 5.224896371714484
[2025-11-25 02:04:04] 2025-11-25 07:03:12,330 | INFO     | sum of square deviations: 422933494436.43964
[2025-11-25 02:04:04] 2025-11-25 07:03:12,368 | INFO     | sum of deviations: 2449365099066.607
[2025-11-25 02:04:04] 2025-11-25 07:03:12,368 | INFO     | mean x: 1764020023.5987377
[2025-11-25 02:04:04] 2025-11-25 07:03:12,369 | INFO     | mean y: 2879112.003606853
[2025-11-25 02:04:04] 2025-11-25 07:03:12,369 | INFO     | intersect: -10213216649.375584
[2025-11-25 02:04:04] 2025-11-25 07:03:12,370 | INFO     | chi2: 2.437744954019186
[2025-11-25 02:04:04] 2025-11-25 07:03:12,370 | INFO     | current chi2=2.437744954019186 (change=53.34366883875114 %)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,372 | INFO     | sum of square deviations: 417238966924.63806
[2025-11-25 02:04:04] 2025-11-25 07:03:12,409 | INFO     | sum of deviations: 2567660514931.2163
[2025-11-25 02:04:04] 2025-11-25 07:03:12,409 | INFO     | mean x: 1764019871.1014493
[2025-11-25 02:04:04] 2025-11-25 07:03:12,410 | INFO     | mean y: 2882276.9266304346
[2025-11-25 02:04:04] 2025-11-25 07:03:12,410 | INFO     | intersect: -10852777260.259762
[2025-11-25 02:04:04] 2025-11-25 07:03:12,411 | INFO     | chi2: 1.9697904279859484
[2025-11-25 02:04:04] 2025-11-25 07:03:12,412 | INFO     | current chi2=1.9697904279859484 (change=19.19620529874162 %)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,412 | INFO     | right removable region: 1103
[2025-11-25 02:04:04] 2025-11-25 07:03:12,413 | INFO     | sum of square deviations: 422933089396.43964
[2025-11-25 02:04:04] 2025-11-25 07:03:12,452 | INFO     | sum of deviations: 1864744349492.1785
[2025-11-25 02:04:04] 2025-11-25 07:03:12,452 | INFO     | mean x: 1764020328.5987377
[2025-11-25 02:04:04] 2025-11-25 07:03:12,452 | INFO     | mean y: 2876582.555455365
[2025-11-25 02:04:04] 2025-11-25 07:03:12,452 | INFO     | intersect: -7774824010.3164425
[2025-11-25 02:04:04] 2025-11-25 07:03:12,454 | INFO     | chi2: 3.5875445436422395
[2025-11-25 02:04:04] 2025-11-25 07:03:12,454 | INFO     | current chi2=3.5875445436422395 (change=31.337498614062813 %)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,456 | INFO     | sum of square deviations: 417238156844.6376
[2025-11-25 02:04:04] 2025-11-25 07:03:12,493 | INFO     | sum of deviations: 1779127623426.94
[2025-11-25 02:04:04] 2025-11-25 07:03:12,493 | INFO     | mean x: 1764020481.1014493
[2025-11-25 02:04:04] 2025-11-25 07:03:12,494 | INFO     | mean y: 2878874.7237318843
[2025-11-25 02:04:04] 2025-11-25 07:03:12,494 | INFO     | intersect: -7519006443.610389
[2025-11-25 02:04:04] 2025-11-25 07:03:12,495 | INFO     | chi2: 3.5069361461185613
[2025-11-25 02:04:04] 2025-11-25 07:03:12,496 | INFO     | current chi2=3.5069361461185613 (change=2.246896074545764 %)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,496 | INFO     | left removable region: 20
[2025-11-25 02:04:04] 2025-11-25 07:03:12,497 | INFO     | sum of square deviations: 393878495733.3424
[2025-11-25 02:04:04] 2025-11-25 07:03:12,533 | INFO     | sum of deviations: 2114047255708.9688
[2025-11-25 02:04:04] 2025-11-25 07:03:12,534 | INFO     | mean x: 1764020450.611265
[2025-11-25 02:04:04] 2025-11-25 07:03:12,534 | INFO     | mean y: 2894715.8716528164
[2025-11-25 02:04:04] 2025-11-25 07:03:12,534 | INFO     | intersect: -9465057033.273708
[2025-11-25 02:04:04] 2025-11-25 07:03:12,535 | INFO     | chi2: 0.18942678379052622
[2025-11-25 02:04:04] 2025-11-25 07:03:12,536 | INFO     | current memory leak: 5.37 B/s (using 1083 data points, chi2=0.19)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,537 | INFO     | could have reported an average CPU frequency of 2609 MHz (41 samples)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,537 | INFO     | ..............................
[2025-11-25 02:04:04] 2025-11-25 07:03:12,537 | INFO     | . Timing measurements:
[2025-11-25 02:04:04] 2025-11-25 07:03:12,537 | INFO     | . get job = 0 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,538 | INFO     | . initial setup = 2 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,538 | INFO     | . payload setup = 4 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,538 | INFO     | . stage-in = 0 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,538 | INFO     | . payload execution = 67951 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,538 | INFO     | . stage-out = 4 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,538 | INFO     | . log creation = 0 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,539 | INFO     | ..............................
[2025-11-25 02:04:04] 2025-11-25 07:03:12,881 | INFO     | 
[2025-11-25 02:04:04] 2025-11-25 07:03:12,881 | INFO     | job summary report
[2025-11-25 02:04:04] 2025-11-25 07:03:12,881 | INFO     | --------------------------------------------------
[2025-11-25 02:04:04] 2025-11-25 07:03:12,881 | INFO     | PanDA job id: 6895344029
[2025-11-25 02:04:04] 2025-11-25 07:03:12,882 | INFO     | task id: 47556137
[2025-11-25 02:04:04] 2025-11-25 07:03:12,882 | INFO     | errors: (none)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 02:04:04] 2025-11-25 07:03:12,882 | INFO     | pilot state: finished 
[2025-11-25 02:04:04] 2025-11-25 07:03:12,882 | INFO     | transexitcode: 0
[2025-11-25 02:04:04] 2025-11-25 07:03:12,883 | INFO     | exeerrorcode: 0
[2025-11-25 02:04:04] 2025-11-25 07:03:12,883 | INFO     | exeerrordiag: 
[2025-11-25 02:04:04] 2025-11-25 07:03:12,883 | INFO     | exitcode: 0
[2025-11-25 02:04:04] 2025-11-25 07:03:12,883 | INFO     | exitmsg: OK
[2025-11-25 02:04:04] 2025-11-25 07:03:12,883 | INFO     | cpuconsumptiontime: 531430 s
[2025-11-25 02:04:04] 2025-11-25 07:03:12,883 | INFO     | nevents: 1000
[2025-11-25 02:04:04] 2025-11-25 07:03:12,884 | INFO     | neventsw: 0
[2025-11-25 02:04:04] 2025-11-25 07:03:12,884 | INFO     | pid: 14038
[2025-11-25 02:04:04] 2025-11-25 07:03:12,884 | INFO     | pgrp: 14038
[2025-11-25 02:04:04] 2025-11-25 07:03:12,884 | INFO     | corecount: 8
[2025-11-25 02:04:04] 2025-11-25 07:03:12,884 | INFO     | event service: False
[2025-11-25 02:04:04] 2025-11-25 07:03:12,884 | INFO     | sizes: {0: 2283431, 1: 2284287, 4: 2284549, 12: 2284577, 67959: 2340661, 67964: 2349655, 67967: 2349839, 67972: 2349959}
[2025-11-25 02:04:04] 2025-11-25 07:03:12,885 | INFO     | --------------------------------------------------
[2025-11-25 02:04:04] 2025-11-25 07:03:12,885 | INFO     | 
[2025-11-25 02:04:04] 2025-11-25 07:03:12,885 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-25 02:04:04] 2025-11-25 07:03:12,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,906 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,906 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,906 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,907 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,907 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,907 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,907 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,907 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,908 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,908 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,908 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,908 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,908 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,908 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,909 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,912 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,912 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 02:04:04] 2025-11-25 07:03:12,913 | INFO     | job 6895344029 has completed (purged errors)
[2025-11-25 02:04:04] 2025-11-25 07:03:12,913 | INFO     | overall cleanup function is called
[2025-11-25 02:04:04] 2025-11-25 07:03:13,929 | INFO     | --- collectZombieJob: --- 10, [14038]
[2025-11-25 02:04:04] 2025-11-25 07:03:13,929 | INFO     | zombie collector waiting for pid 14038
[2025-11-25 02:04:04] 2025-11-25 07:03:13,929 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 02:04:04] 2025-11-25 07:03:13,929 | INFO     | collected zombie processes
[2025-11-25 02:04:04] 2025-11-25 07:03:13,930 | INFO     | will attempt to kill all subprocesses of pid=14038
[2025-11-25 02:04:04] 2025-11-25 07:03:14,124 | INFO     | process IDs to be killed: [14038] (in reverse order)
[2025-11-25 02:04:04] 2025-11-25 07:03:14,259 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 02:04:04] 2025-11-25 07:03:14,259 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 02:04:04] 2025-11-25 07:03:14,265 | INFO     | did not find any defunct processes belonging to 14038
[2025-11-25 02:04:04] 2025-11-25 07:03:14,270 | INFO     | did not find any defunct processes belonging to 14038
[2025-11-25 02:04:04] 2025-11-25 07:03:14,272 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 02:04:04] 2025-11-25 07:03:14,272 | INFO     | ready for new job
[2025-11-25 02:04:04] 2025-11-25 07:03:14,273 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 02:04:04] 2025-11-25 07:03:14,278 | INFO     | ***************************************
[2025-11-25 02:04:04] 2025-11-25 07:03:14,278 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 02:04:04] 2025-11-25 07:03:14,278 | INFO     | ***************************************
[2025-11-25 02:04:04] 2025-11-25 07:03:14,278 | INFO     | 
[2025-11-25 02:04:04] 2025-11-25 07:03:14,280 | INFO     | architecture information:
[2025-11-25 02:04:04] 2025-11-25 07:03:14,280 | INFO     | executing command: cat /etc/os-release
[2025-11-25 02:04:04] 2025-11-25 07:03:14,316 | INFO     | cat /etc/os-release:
[2025-11-25 02:04:04] NAME="CentOS Linux"
[2025-11-25 02:04:04] VERSION="7 (Core)"
[2025-11-25 02:04:04] ID="centos"
[2025-11-25 02:04:04] ID_LIKE="rhel fedora"
[2025-11-25 02:04:04] VERSION_ID="7"
[2025-11-25 02:04:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 02:04:04] ANSI_COLOR="0;31"
[2025-11-25 02:04:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 02:04:04] HOME_URL="https://www.centos.org/"
[2025-11-25 02:04:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 02:04:04] 
[2025-11-25 02:04:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 02:04:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 02:04:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 02:04:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 02:04:04] 
[2025-11-25 02:04:04] 2025-11-25 07:03:14,316 | INFO     | ***************************************
[2025-11-25 02:04:04] 2025-11-25 07:03:14,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-25 02:04:04] 2025-11-25 07:03:14,838 | INFO     | sufficient remaining disk space (25740443648 B)
[2025-11-25 02:04:04] 2025-11-25 07:03:14,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 02:04:04] 2025-11-25 07:03:14,839 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 02:04:04] 2025-11-25 07:03:14,839 | INFO     | update_server=False
[2025-11-25 02:04:04] 2025-11-25 07:03:14,839 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 02:04:04] 2025-11-25 07:03:14,840 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 02:04:04] 2025-11-25 07:03:15,255 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 02:04:04] 2025-11-25 07:03:15,431 | INFO     | all data control threads have been joined
[2025-11-25 02:04:04] 2025-11-25 07:03:15,553 | INFO     | all job control threads have been joined
[2025-11-25 02:04:04] 2025-11-25 07:03:15,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:04:04] 2025-11-25 07:03:15,716 | INFO     | aborting loop
[2025-11-25 02:04:04] 2025-11-25 07:03:15,845 | INFO     | [job] retrieve thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:15,886 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,239 | INFO     | all payload control threads have been joined
[2025-11-25 02:04:04] 2025-11-25 07:03:16,407 | INFO     | [data] copytool_in thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,410 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,431 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,437 | INFO     | [data] control thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,559 | INFO     | [job] control thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,561 | INFO     | [job] validate thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,722 | INFO     | [job] job monitor thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,877 | INFO     | [payload] failed_post thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:16,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:17,245 | INFO     | [payload] control thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:17,260 | INFO     | [data] copytool_out thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:17,445 | INFO     | [payload] validate_post thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:17,640 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 02:04:04] 2025-11-25 07:03:18,645 | INFO     | [job] queue monitor thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:18,849 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 02:04:04] 2025-11-25 07:03:44,390 | INFO     | PID=4232 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-25 02:04:04] 2025-11-25 07:03:44,390 | INFO     | .. there are 3 such processes running
[2025-11-25 02:04:04] 2025-11-25 07:03:44,391 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 02:04:04] 2025-11-25 07:03:44,391 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 02:04:04] 2025-11-25 07:03:44,391 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 02:04:04] 2025-11-25 07:03:58,960 | INFO     | [monitor] cgroup control has ended
[2025-11-25 02:04:04] 2025-11-25 07:03:59,489 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140227839014720)>', '<ExcThread(monitor, started 140227175765760)>']
[2025-11-25 02:04:04] 2025-11-25 07:04:00,475 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 02:04:04] 2025-11-25 07:04:00,475 | INFO     | [monitor] control thread has ended
[2025-11-25 02:04:04] 2025-11-25 07:04:04,514 | INFO     | all workflow threads have been joined
[2025-11-25 02:04:04] 2025-11-25 07:04:04,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 02:04:04] 2025-11-25 07:04:04,514 | INFO     | traces error code: 0
[2025-11-25 02:04:04] 2025-11-25 07:04:04,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 02:04:04] 2025-11-25 07:04:04,626 [wrapper] ==== pilot stdout END ====
[2025-11-25 02:04:04] 2025-11-25 07:04:04,629 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 02:04:04] 2025-11-25 07:04:04,631 [wrapper] pilotpid: 4232
[2025-11-25 02:04:04] 2025-11-25 07:04:04,633 [wrapper] Pilot exit status: 0
[2025-11-25 02:04:04] 2025-11-25 07:04:04,641 [wrapper] pandaids: 6895344029
[2025-11-25 02:04:04] 2025-11-25 07:04:04,670 [wrapper] cleanup supervisor_pilot 18680 4233
[2025-11-25 02:04:04] 2025-11-25 07:04:04,672 [wrapper] Test setup, not cleaning
[2025-11-25 02:04:04] 2025-11-25 07:04:04,674 [wrapper] apfmon messages muted
[2025-11-25 02:04:04] 2025-11-25 07:04:04,676 [wrapper] ==== wrapper stdout END ====
[2025-11-25 02:04:04] 2025-11-25 07:04:04,678 [wrapper] ==== wrapper stderr END ====
[2025-11-25 02:04:04]  *** Error codes and diagnostics ***
[2025-11-25 02:04:04]     "exeErrorCode": 0,
[2025-11-25 02:04:04]     "exeErrorDiag": "",
[2025-11-25 02:04:04]     "pilotErrorCode": 0,
[2025-11-25 02:04:04]     "pilotErrorDiag": "",
[2025-11-25 02:04:04]  *** Listing of results directory ***
[2025-11-25 02:04:04] total 1328276
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 11:22 pilot3.tar.gz
[2025-11-25 02:04:04] -rwx------ 1 boincer umatlas     36292 Nov 22 11:32 runpilot2-wrapper.sh
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 11:32 queuedata.json
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas       100 Nov 24 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 02:04:04] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 07:09 run_atlas
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas       105 Nov 24 07:09 job.xml
[2025-11-25 02:04:04] -rw-r--r-- 2 boincer umatlas 409670125 Nov 24 07:09 EVNT.47483658._000430.pool.root.1
[2025-11-25 02:04:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 07:09 start_atlas.sh
[2025-11-25 02:04:04] drwxrwx--x 2 boincer umatlas      4096 Nov 24 07:09 shared
[2025-11-25 02:04:04] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 07:09 input.tar.gz
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas         0 Nov 24 07:09 boinc_lockfile
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 07:09 pandaJob.out
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas        57 Nov 24 07:09 setup.sh.local
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas    989803 Nov 24 07:10 agis_schedconf.cvmfs.json
[2025-11-25 02:04:04] drwx------ 5 boincer umatlas      4096 Nov 24 07:10 pilot3
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas       533 Nov 25 01:50 boinc_task_state.xml
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas      5954 Nov 25 01:57 init_data.xml
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas 923136546 Nov 25 02:02 HITS.47556137._004256.pool.root.1
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas      1067 Nov 25 02:02 memory_monitor_summary.json
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas   1516227 Nov 25 02:03 agis_ddmendpoints.agis.ALL.json
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas   2293642 Nov 25 02:03 log.47556137._004256.job.log.tgz.1
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas      8660 Nov 25 02:03 heartbeat.json
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas        95 Nov 25 02:03 pilot_heartbeat.json
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 02:03 boinc_mmap_file
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas        29 Nov 25 02:03 wrapper_checkpoint.txt
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas      4820 Nov 25 02:04 pilotlog.txt
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas   9421872 Nov 25 02:04 log.47556137._004256.job.log.1
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas       353 Nov 25 02:04 output.list
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas       620 Nov 25 02:04 runtime_log
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas  11735040 Nov 25 02:04 result.tar.gz
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 02:04 runtime_log.err
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas       668 Nov 25 02:04 ILQNDmvh5g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPGKKDmi5bGJo.diag
[2025-11-25 02:04:04] -rw-r--r-- 1 boincer umatlas     21304 Nov 25 02:04 stderr.txt
[2025-11-25 02:04:04] HITS file was successfully produced:
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas 923136546 Nov 25 02:02 shared/HITS.pool.root.1
[2025-11-25 02:04:04]  *** Contents of shared directory: ***
[2025-11-25 02:04:04] total 1313636
[2025-11-25 02:04:04] -rw-r--r-- 2 boincer umatlas 409670125 Nov 24 07:09 ATLAS.root_0
[2025-11-25 02:04:04] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 07:09 start_atlas.sh
[2025-11-25 02:04:04] -rw-r--r-- 2 boincer umatlas    590098 Nov 24 07:09 input.tar.gz
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas 923136546 Nov 25 02:02 HITS.pool.root.1
[2025-11-25 02:04:04] -rw------- 1 boincer umatlas  11735040 Nov 25 02:04 result.tar.gz
02:04:05 (32586): run_atlas exited; CPU time 531044.844204
02:04:05 (32586): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN