Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:57:26 (1150336): wrapper (7.7.26015): starting
17:57:26 (1150336): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 17:57:26] Arguments: --nthreads 4
[2025-11-27 17:57:26] Threads: 4
[2025-11-27 17:57:26] Checking for CVMFS
[2025-11-27 17:57:26] No cvmfs_config command found, will try listing directly
[2025-11-27 17:57:26] CVMFS is ok
[2025-11-27 17:57:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 17:57:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 17:57:26] Further information can be found at the LHC@home message board.
[2025-11-27 17:57:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 17:57:26] Checking for apptainer binary...
[2025-11-27 17:57:26] which: no apptainer in ((null))
[2025-11-27 17:57:26] apptainer is not installed, using version from CVMFS
[2025-11-27 17:57:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 17:57:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-27 17:57:26] apptainer works
[2025-11-27 17:57:26] Set ATHENA_PROC_NUMBER=4
[2025-11-27 17:57:26] Set ATHENA_CORE_NUMBER=4
[2025-11-27 17:57:26] Starting ATLAS job with PandaID=6895364667
[2025-11-27 17:57:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
22:54:16 (1553477): wrapper (7.7.26015): starting
22:54:16 (1553477): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 22:54:16] Arguments: --nthreads 4
[2025-11-27 22:54:16] Threads: 4
[2025-11-27 22:54:16] This job has been restarted, cleaning up previous attempt
[2025-11-27 22:54:16] Checking for CVMFS
[2025-11-27 22:54:16] No cvmfs_config command found, will try listing directly
[2025-11-27 22:54:16] CVMFS is ok
[2025-11-27 22:54:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 22:54:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 22:54:16] Further information can be found at the LHC@home message board.
[2025-11-27 22:54:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 22:54:16] Checking for apptainer binary...
[2025-11-27 22:54:16] which: no apptainer in ((null))
[2025-11-27 22:54:16] apptainer is not installed, using version from CVMFS
[2025-11-27 22:54:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 22:54:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-27 22:54:16] apptainer works
[2025-11-27 22:54:16] Set ATHENA_PROC_NUMBER=4
[2025-11-27 22:54:16] Set ATHENA_CORE_NUMBER=4
[2025-11-27 22:54:16] Starting ATLAS job with PandaID=6895364667
[2025-11-27 22:54:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 14:44:12]  *** The last 200 lines of the pilot log: ***
[2025-11-28 14:44:12] 2025-11-28 13:42:23,009 | INFO     | monitor loop #3832: job 0:6895364667 is in state 'finished'
[2025-11-28 14:44:12] 2025-11-28 13:42:23,010 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 14:44:12] 2025-11-28 13:42:23,072 | INFO     | time since job start (56873s) is within the limit (172800.0s)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,320 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 14:44:12] 2025-11-28 13:42:24,338 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2655.3555546875
[2025-11-28 14:44:12] 2025-11-28 13:42:24,361 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6895364667/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,362 | INFO     | extracted standard info from prmon json
[2025-11-28 14:44:12] 2025-11-28 13:42:24,362 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 14:44:12] 2025-11-28 13:42:24,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 14:44:12] 2025-11-28 13:42:24,376 | INFO     | fitting pss+swap vs Time
[2025-11-28 14:44:12] 2025-11-28 13:42:24,377 | INFO     | sum of square deviations: 251030020213.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,397 | INFO     | sum of deviations: 752693262288.0002
[2025-11-28 14:44:12] 2025-11-28 13:42:24,397 | INFO     | mean x: 1764308899.5
[2025-11-28 14:44:12] 2025-11-28 13:42:24,397 | INFO     | mean y: 2272952.600858369
[2025-11-28 14:44:12] 2025-11-28 13:42:24,397 | INFO     | intersect: -5287864936.571151
[2025-11-28 14:44:12] 2025-11-28 13:42:24,398 | INFO     | chi2: 4.573503653645603
[2025-11-28 14:44:12] 2025-11-28 13:42:24,399 | INFO     | sum of square deviations: 247011470448.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,419 | INFO     | sum of deviations: 958634626688.9989
[2025-11-28 14:44:12] 2025-11-28 13:42:24,419 | INFO     | mean x: 1764308747.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,419 | INFO     | mean y: 2280763.932038835
[2025-11-28 14:44:12] 2025-11-28 13:42:24,419 | INFO     | intersect: -6844880843.490288
[2025-11-28 14:44:12] 2025-11-28 13:42:24,420 | INFO     | chi2: 2.0767052022989736
[2025-11-28 14:44:12] 2025-11-28 13:42:24,420 | INFO     | current chi2=2.0767052022989736 (change=54.592685180351765 %)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,421 | INFO     | sum of square deviations: 243036037770.5
[2025-11-28 14:44:12] 2025-11-28 13:42:24,440 | INFO     | sum of deviations: 944336530957.0005
[2025-11-28 14:44:12] 2025-11-28 13:42:24,441 | INFO     | mean x: 1764308594.5
[2025-11-28 14:44:12] 2025-11-28 13:42:24,441 | INFO     | mean y: 2280215.464208243
[2025-11-28 14:44:12] 2025-11-28 13:42:24,441 | INFO     | intersect: -6853086062.523988
[2025-11-28 14:44:12] 2025-11-28 13:42:24,442 | INFO     | chi2: 2.0767592922420817
[2025-11-28 14:44:12] 2025-11-28 13:42:24,442 | INFO     | current chi2=2.0767592922420817 (change=-0.0026046038237970354 %)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,442 | INFO     | right removable region: 921
[2025-11-28 14:44:12] 2025-11-28 13:42:24,443 | INFO     | sum of square deviations: 247011470448.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,461 | INFO     | sum of deviations: 573522713090.0001
[2025-11-28 14:44:12] 2025-11-28 13:42:24,462 | INFO     | mean x: 1764309052.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,462 | INFO     | mean y: 2279740.498381877
[2025-11-28 14:44:12] 2025-11-28 13:42:24,462 | INFO     | intersect: -4094175020.8820286
[2025-11-28 14:44:12] 2025-11-28 13:42:24,463 | INFO     | chi2: 2.609997450728189
[2025-11-28 14:44:12] 2025-11-28 13:42:24,463 | INFO     | current chi2=2.609997450728189 (change=42.932210218139346 %)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,464 | INFO     | sum of square deviations: 243036037770.5
[2025-11-28 14:44:12] 2025-11-28 13:42:24,482 | INFO     | sum of deviations: 544315302266.5
[2025-11-28 14:44:12] 2025-11-28 13:42:24,482 | INFO     | mean x: 1764309204.5
[2025-11-28 14:44:12] 2025-11-28 13:42:24,482 | INFO     | mean y: 2280860.3177874186
[2025-11-28 14:44:12] 2025-11-28 13:42:24,483 | INFO     | intersect: -3949151638.124437
[2025-11-28 14:44:12] 2025-11-28 13:42:24,484 | INFO     | chi2: 2.5913653851484364
[2025-11-28 14:44:12] 2025-11-28 13:42:24,484 | INFO     | current chi2=2.5913653851484364 (change=0.7138729416978609 %)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,484 | INFO     | left removable region: 20
[2025-11-28 14:44:12] 2025-11-28 13:42:24,485 | INFO     | sum of square deviations: 226804810650.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,502 | INFO     | sum of deviations: 687939064929.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,503 | INFO     | mean x: 1764309174.0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,503 | INFO     | mean y: 2290002.306326304
[2025-11-28 14:44:12] 2025-11-28 13:42:24,503 | INFO     | intersect: -5349171458.889168
[2025-11-28 14:44:12] 2025-11-28 13:42:24,504 | INFO     | chi2: 0.06527206926162837
[2025-11-28 14:44:12] 2025-11-28 13:42:24,504 | INFO     | current memory leak: 3.03 B/s (using 901 data points, chi2=0.07)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,505 | INFO     | could have reported an average CPU frequency of 2683 MHz (35 samples)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,505 | INFO     | ..............................
[2025-11-28 14:44:12] 2025-11-28 13:42:24,505 | INFO     | . Timing measurements:
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . get job = 0 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . initial setup = 1 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . payload setup = 8 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . stage-in = 0 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . payload execution = 56833 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . stage-out = 2 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | . log creation = 0 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,506 | INFO     | ..............................
[2025-11-28 14:44:12] 2025-11-28 13:42:24,590 | INFO     | 
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | job summary report
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | --------------------------------------------------
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | PanDA job id: 6895364667
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | task id: 47556137
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | errors: (none)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | pilot state: finished 
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | transexitcode: 0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,591 | INFO     | exeerrorcode: 0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | exeerrordiag: 
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | exitcode: 0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | exitmsg: OK
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | cpuconsumptiontime: 225281 s
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | nevents: 1000
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | neventsw: 0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | pid: 1565048
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | pgrp: 1565048
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | corecount: 4
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | event service: False
[2025-11-28 14:44:12] 2025-11-28 13:42:24,592 | INFO     | sizes: {0: 2284276, 7: 2284538, 11: 2284566, 56846: 2338686, 56849: 2347760, 56857: 2347950}
[2025-11-28 14:44:12] 2025-11-28 13:42:24,593 | INFO     | --------------------------------------------------
[2025-11-28 14:44:12] 2025-11-28 13:42:24,593 | INFO     | 
[2025-11-28 14:44:12] 2025-11-28 13:42:24,593 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-28 14:44:12] 2025-11-28 13:42:24,624 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,624 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,626 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 14:44:12] 2025-11-28 13:42:24,627 | INFO     | job 6895364667 has completed (purged errors)
[2025-11-28 14:44:12] 2025-11-28 13:42:24,627 | INFO     | overall cleanup function is called
[2025-11-28 14:44:12] 2025-11-28 13:42:25,645 | INFO     | --- collectZombieJob: --- 10, [1565048]
[2025-11-28 14:44:12] 2025-11-28 13:42:25,645 | INFO     | zombie collector waiting for pid 1565048
[2025-11-28 14:44:12] 2025-11-28 13:42:25,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 14:44:12] 2025-11-28 13:42:25,645 | INFO     | collected zombie processes
[2025-11-28 14:44:12] 2025-11-28 13:42:25,645 | INFO     | will attempt to kill all subprocesses of pid=1565048
[2025-11-28 14:44:12] 2025-11-28 13:42:26,407 | INFO     | process IDs to be killed: [1565048] (in reverse order)
[2025-11-28 14:44:12] 2025-11-28 13:42:26,644 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 14:44:12] 2025-11-28 13:42:26,644 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 14:44:12] 2025-11-28 13:42:26,677 | INFO     | did not find any defunct processes belonging to 1565048
[2025-11-28 14:44:12] 2025-11-28 13:42:26,709 | INFO     | did not find any defunct processes belonging to 1565048
[2025-11-28 14:44:12] 2025-11-28 13:42:26,711 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 14:44:12] 2025-11-28 13:42:26,711 | INFO     | ready for new job
[2025-11-28 14:44:12] 2025-11-28 13:42:26,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 14:44:12] 2025-11-28 13:42:26,718 | INFO     | ***************************************
[2025-11-28 14:44:12] 2025-11-28 13:42:26,718 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 14:44:12] 2025-11-28 13:42:26,718 | INFO     | ***************************************
[2025-11-28 14:44:12] 2025-11-28 13:42:26,718 | INFO     | 
[2025-11-28 14:44:12] 2025-11-28 13:42:26,727 | INFO     | architecture information:
[2025-11-28 14:44:12] 2025-11-28 13:42:26,727 | INFO     | executing command: cat /etc/os-release
[2025-11-28 14:44:12] 2025-11-28 13:42:26,753 | INFO     | cat /etc/os-release:
[2025-11-28 14:44:12] NAME="CentOS Linux"
[2025-11-28 14:44:12] VERSION="7 (Core)"
[2025-11-28 14:44:12] ID="centos"
[2025-11-28 14:44:12] ID_LIKE="rhel fedora"
[2025-11-28 14:44:12] VERSION_ID="7"
[2025-11-28 14:44:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 14:44:12] ANSI_COLOR="0;31"
[2025-11-28 14:44:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 14:44:12] HOME_URL="https://www.centos.org/"
[2025-11-28 14:44:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 14:44:12] 
[2025-11-28 14:44:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 14:44:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 14:44:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 14:44:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 14:44:12] 
[2025-11-28 14:44:12] 2025-11-28 13:42:26,753 | INFO     | ***************************************
[2025-11-28 14:44:12] 2025-11-28 13:42:27,257 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-28 14:44:12] 2025-11-28 13:42:27,282 | INFO     | sufficient remaining disk space (3294114086912 B)
[2025-11-28 14:44:12] 2025-11-28 13:42:27,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 14:44:12] 2025-11-28 13:42:27,283 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 14:44:12] 2025-11-28 13:42:27,283 | INFO     | update_server=False
[2025-11-28 14:44:12] 2025-11-28 13:42:27,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 14:44:12] 2025-11-28 13:42:27,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:44:12] 2025-11-28 13:42:27,284 | INFO     | aborting loop
[2025-11-28 14:44:12] 2025-11-28 13:42:27,284 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 14:44:12] 2025-11-28 13:42:27,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 14:44:12] 2025-11-28 13:42:27,547 | INFO     | all data control threads have been joined
[2025-11-28 14:44:12] 2025-11-28 13:42:27,718 | INFO     | all payload control threads have been joined
[2025-11-28 14:44:12] 2025-11-28 13:42:28,284 | INFO     | [job] retrieve thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:28,285 | INFO     | [job] job monitor thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:28,553 | INFO     | [data] control thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:28,723 | INFO     | [payload] control thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:28,772 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:28,925 | INFO     | all job control threads have been joined
[2025-11-28 14:44:12] 2025-11-28 13:42:29,289 | INFO     | [data] copytool_out thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,343 | INFO     | [data] copytool_in thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,372 | INFO     | [payload] failed_post thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,480 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,551 | INFO     | [payload] validate_post thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,593 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 14:44:12] 2025-11-28 13:42:29,661 | INFO     | [job] validate thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,700 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:29,931 | INFO     | [job] control thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:30,602 | INFO     | [job] queue monitor thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:31,324 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 14:44:12] 2025-11-28 13:42:57,108 | INFO     | PID=1557526 has CPU usage=14.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-28 14:44:12] 2025-11-28 13:42:57,108 | INFO     | .. there are 6 such processes running
[2025-11-28 14:44:12] 2025-11-28 13:42:57,108 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 14:44:12] 2025-11-28 13:42:57,109 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 14:44:12] 2025-11-28 13:42:57,109 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 14:44:12] 2025-11-28 13:43:01,485 | INFO     | [monitor] cgroup control has ended
[2025-11-28 14:44:12] 2025-11-28 13:43:03,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22737920476992)>', '<ExcThread(monitor, started 22737602959104)>']
[2025-11-28 14:44:12] 2025-11-28 13:43:04,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 14:44:12] 2025-11-28 13:43:04,144 | INFO     | [monitor] control thread has ended
[2025-11-28 14:44:12] 2025-11-28 13:43:08,409 | INFO     | all workflow threads have been joined
[2025-11-28 14:44:12] 2025-11-28 13:43:08,412 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 14:44:12] 2025-11-28 13:43:08,413 | INFO     | traces error code: 0
[2025-11-28 14:44:12] 2025-11-28 13:43:08,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 14:44:12] 2025-11-28 13:43:08,589 [wrapper] ==== pilot stdout END ====
[2025-11-28 14:44:12] 2025-11-28 13:43:08,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 14:44:12] 2025-11-28 13:43:08,597 [wrapper] pilotpid: 1557526
[2025-11-28 14:44:12] 2025-11-28 13:43:08,600 [wrapper] Pilot exit status: 0
[2025-11-28 14:44:12] 2025-11-28 13:43:08,614 [wrapper] pandaids: 6895364667 6895364667
[2025-11-28 14:44:12] 2025-11-28 13:43:08,797 [wrapper] cleanup supervisor_pilot 2808315 1557527
[2025-11-28 14:44:12] 2025-11-28 13:43:08,801 [wrapper] Test setup, not cleaning
[2025-11-28 14:44:12] 2025-11-28 13:43:08,805 [wrapper] apfmon messages muted
[2025-11-28 14:44:12] 2025-11-28 13:43:08,808 [wrapper] ==== wrapper stdout END ====
[2025-11-28 14:44:12] 2025-11-28 13:43:08,812 [wrapper] ==== wrapper stderr END ====
[2025-11-28 14:44:12]  *** Error codes and diagnostics ***
[2025-11-28 14:44:12]     "exeErrorCode": 0,
[2025-11-28 14:44:12]     "exeErrorDiag": "",
[2025-11-28 14:44:12]     "pilotErrorCode": 0,
[2025-11-28 14:44:12]     "pilotErrorDiag": "",
[2025-11-28 14:44:12]  *** Listing of results directory ***
[2025-11-28 14:44:12] total 1724436
[2025-11-28 14:44:12] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc    576529 Nov 23 17:03 pilot3.tar.gz
[2025-11-28 14:44:12] -rwx------ 1 boinc boinc     36292 Nov 23 17:10 runpilot2-wrapper.sh
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc      5112 Nov 23 17:10 queuedata.json
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc       100 Nov 27 17:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 14:44:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 17:57 run_atlas
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc       105 Nov 27 17:57 job.xml
[2025-11-28 14:44:12] -rw-r--r-- 3 boinc boinc 409514147 Nov 27 17:57 EVNT.47483658._000814.pool.root.1
[2025-11-28 14:44:12] -rw-r--r-- 3 boinc boinc 409514147 Nov 27 17:57 ATLAS.root_0
[2025-11-28 14:44:12] -rw-r--r-- 2 boinc boinc     15847 Nov 27 17:57 start_atlas.sh
[2025-11-28 14:44:12] drwxrwx--x 2 boinc boinc      4096 Nov 27 17:57 shared
[2025-11-28 14:44:12] -rw-r--r-- 2 boinc boinc    590103 Nov 27 17:57 input.tar.gz
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc         0 Nov 27 17:57 boinc_lockfile
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc      2785 Nov 27 22:54 pandaJob.out
[2025-11-28 14:44:12] -rw------- 1 boinc boinc    991540 Nov 27 22:54 agis_schedconf.cvmfs.json
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc      6694 Nov 27 22:59 init_data.xml
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc       532 Nov 28 14:37 boinc_task_state.xml
[2025-11-28 14:44:12] -rw------- 1 boinc boinc 923812471 Nov 28 14:41 HITS.47556137._008003.pool.root.1
[2025-11-28 14:44:12] -rw------- 1 boinc boinc        96 Nov 28 14:42 pilot_heartbeat.json
[2025-11-28 14:44:12] -rw------- 1 boinc boinc      1041 Nov 28 14:42 memory_monitor_summary.json
[2025-11-28 14:44:12] -rw------- 1 boinc boinc   1516240 Nov 28 14:42 agis_ddmendpoints.agis.ALL.json
[2025-11-28 14:44:12] -rw------- 1 boinc boinc   1679720 Nov 28 14:42 log.47556137._008003.job.log.tgz.1
[2025-11-28 14:44:12] -rw------- 1 boinc boinc      8592 Nov 28 14:42 heartbeat.json
[2025-11-28 14:44:12] -rw------- 1 boinc boinc      4836 Nov 28 14:43 pilotlog.txt
[2025-11-28 14:44:12] -rw------- 1 boinc boinc   7845541 Nov 28 14:43 log.47556137._008003.job.log.1
[2025-11-28 14:44:12] -rw------- 1 boinc boinc       353 Nov 28 14:43 output.list
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc       620 Nov 28 14:43 runtime_log
[2025-11-28 14:44:12] -rw------- 1 boinc boinc   9543680 Nov 28 14:43 result.tar.gz
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc      9300 Nov 28 14:43 runtime_log.err
[2025-11-28 14:44:12] -rw------- 1 boinc boinc       795 Nov 28 14:43 dA6LDmIqRh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmS2KKDmepXXYm.diag
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc        28 Nov 28 14:44 wrapper_checkpoint.txt
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc      8192 Nov 28 14:44 boinc_mmap_file
[2025-11-28 14:44:12] -rw-r--r-- 1 boinc boinc     22958 Nov 28 14:44 stderr.txt
[2025-11-28 14:44:12] HITS file was successfully produced:
[2025-11-28 14:44:12] -rw------- 1 boinc boinc 923812471 Nov 28 14:41 shared/HITS.pool.root.1
[2025-11-28 14:44:12]  *** Contents of shared directory: ***
[2025-11-28 14:44:12] total 1312008
[2025-11-28 14:44:12] -rw-r--r-- 3 boinc boinc 409514147 Nov 27 17:57 ATLAS.root_0
[2025-11-28 14:44:12] -rw-r--r-- 2 boinc boinc     15847 Nov 27 17:57 start_atlas.sh
[2025-11-28 14:44:12] -rw-r--r-- 2 boinc boinc    590103 Nov 27 17:57 input.tar.gz
[2025-11-28 14:44:12] -rw------- 1 boinc boinc 923812471 Nov 28 14:41 HITS.pool.root.1
[2025-11-28 14:44:12] -rw------- 1 boinc boinc   9543680 Nov 28 14:43 result.tar.gz
14:44:13 (1553477): run_atlas exited; CPU time 228233.382832
14:44:13 (1553477): called boinc_finish(0)

</stderr_txt>
]]>

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