Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:06:01 (3030): wrapper (7.7.26015): starting
07:06:01 (3030): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 07:06:01] Arguments: --nthreads 12
[2025-11-24 07:06:01] Threads: 12
[2025-11-24 07:06:01] Checking for CVMFS
[2025-11-24 07:06:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 07:06:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 07:06:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 07:06:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 07:06:02] 2.11.2.0 2991 284733 94304 153244 2 82 15520449 20275200 1 130560 1 128497653 99.962 17465970 14531 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 07:06:02] CVMFS is ok
[2025-11-24 07:06:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 07:06:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 07:06:02] Further information can be found at the LHC@home message board.
[2025-11-24 07:06:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 07:06:02] Checking for apptainer binary...
[2025-11-24 07:06:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 07:06:02] Running /usr/bin/apptainer --version
[2025-11-24 07:06:02] apptainer version 1.3.2-1.el7
[2025-11-24 07:06:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 07:06:03] c-205-32.aglt2.org
[2025-11-24 07:06:03] apptainer works
[2025-11-24 07:06:03] Set ATHENA_PROC_NUMBER=12
[2025-11-24 07:06:03] Set ATHENA_CORE_NUMBER=12
[2025-11-24 07:06:03] Starting ATLAS job with PandaID=6893846211
[2025-11-24 07:06:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 14:19:06]  *** The last 200 lines of the pilot log: ***
[2025-11-24 14:19:06] 2025-11-24 19:18:07,050 | INFO     | time since job start (25910s) is within the limit (172800.0s)
[2025-11-24 14:19:06] 2025-11-24 19:18:08,045 | INFO     | monitor loop #1943: job 0:6893846211 is in state 'finished'
[2025-11-24 14:19:06] 2025-11-24 19:18:08,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,055 | INFO     | time since job start (25912s) is within the limit (172800.0s)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,464 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 14:19:06] 2025-11-24 19:18:09,468 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-24 14:19:06] 2025-11-24 19:18:09,470 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893846211/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,471 | INFO     | extracted standard info from prmon json
[2025-11-24 14:19:06] 2025-11-24 19:18:09,471 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 14:19:06] 2025-11-24 19:18:09,471 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 14:19:06] 2025-11-24 19:18:09,479 | INFO     | fitting pss+swap vs Time
[2025-11-24 14:19:06] 2025-11-24 19:18:09,479 | INFO     | sum of square deviations: 23803530724.941105
[2025-11-24 14:19:06] 2025-11-24 19:18:09,483 | INFO     | sum of deviations: 373142261969.9298
[2025-11-24 14:19:06] 2025-11-24 19:18:09,483 | INFO     | mean x: 1763998938.2117648
[2025-11-24 14:19:06] 2025-11-24 19:18:09,484 | INFO     | mean y: 3412147.934117647
[2025-11-24 14:19:06] 2025-11-24 19:18:09,484 | INFO     | intersect: -27648895466.54987
[2025-11-24 14:19:06] 2025-11-24 19:18:09,484 | INFO     | chi2: 6.353849720897551
[2025-11-24 14:19:06] 2025-11-24 19:18:09,485 | INFO     | sum of square deviations: 22973272839.714336
[2025-11-24 14:19:06] 2025-11-24 19:18:09,488 | INFO     | sum of deviations: 541751117170.5709
[2025-11-24 14:19:06] 2025-11-24 19:18:09,489 | INFO     | mean x: 1763998785.7142856
[2025-11-24 14:19:06] 2025-11-24 19:18:09,489 | INFO     | mean y: 3443085.4714285713
[2025-11-24 14:19:06] 2025-11-24 19:18:09,489 | INFO     | intersect: -41594822843.6302
[2025-11-24 14:19:06] 2025-11-24 19:18:09,489 | INFO     | chi2: 3.1005508569400586
[2025-11-24 14:19:06] 2025-11-24 19:18:09,489 | INFO     | current chi2=3.1005508569400586 (change=51.20201148694981 %)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,490 | INFO     | sum of square deviations: 22162550204.481895
[2025-11-24 14:19:06] 2025-11-24 19:18:09,494 | INFO     | sum of deviations: 605136490087.1329
[2025-11-24 14:19:06] 2025-11-24 19:18:09,494 | INFO     | mean x: 1763998633.2168674
[2025-11-24 14:19:06] 2025-11-24 19:18:09,494 | INFO     | mean y: 3454966.209638554
[2025-11-24 14:19:06] 2025-11-24 19:18:09,494 | INFO     | intersect: -48161577107.016495
[2025-11-24 14:19:06] 2025-11-24 19:18:09,494 | INFO     | chi2: 2.4012549840918522
[2025-11-24 14:19:06] 2025-11-24 19:18:09,494 | INFO     | current chi2=2.4012549840918522 (change=22.553923644985563 %)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,495 | INFO     | right removable region: 414
[2025-11-24 14:19:06] 2025-11-24 19:18:09,495 | INFO     | sum of square deviations: 22973243742.14052
[2025-11-24 14:19:06] 2025-11-24 19:18:09,499 | INFO     | sum of deviations: 240164457815.3143
[2025-11-24 14:19:06] 2025-11-24 19:18:09,499 | INFO     | mean x: 1763999090.7119048
[2025-11-24 14:19:06] 2025-11-24 19:18:09,499 | INFO     | mean y: 3436489.4571428574
[2025-11-24 14:19:06] 2025-11-24 19:18:09,499 | INFO     | intersect: -18437576454.24041
[2025-11-24 14:19:06] 2025-11-24 19:18:09,500 | INFO     | chi2: 4.162474354043527
[2025-11-24 14:19:06] 2025-11-24 19:18:09,500 | INFO     | current chi2=4.162474354043527 (change=34.48893919613301 %)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,500 | INFO     | sum of square deviations: 22162492131.339783
[2025-11-24 14:19:06] 2025-11-24 19:18:09,504 | INFO     | sum of deviations: 203547021755.7664
[2025-11-24 14:19:06] 2025-11-24 19:18:09,504 | INFO     | mean x: 1763999243.2120483
[2025-11-24 14:19:06] 2025-11-24 19:18:09,504 | INFO     | mean y: 3443370.286746988
[2025-11-24 14:19:06] 2025-11-24 19:18:09,504 | INFO     | intersect: -16197658482.672255
[2025-11-24 14:19:06] 2025-11-24 19:18:09,505 | INFO     | chi2: 4.090462176690728
[2025-11-24 14:19:06] 2025-11-24 19:18:09,505 | INFO     | current chi2=4.090462176690728 (change=1.7300329378088473 %)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,505 | INFO     | left removable region: 20
[2025-11-24 14:19:06] 2025-11-24 19:18:09,505 | INFO     | sum of square deviations: 18965472643.72819
[2025-11-24 14:19:06] 2025-11-24 19:18:09,509 | INFO     | sum of deviations: 375788276596.31976
[2025-11-24 14:19:06] 2025-11-24 19:18:09,509 | INFO     | mean x: 1763999212.718274
[2025-11-24 14:19:06] 2025-11-24 19:18:09,509 | INFO     | mean y: 3499062.7055837563
[2025-11-24 14:19:06] 2025-11-24 19:18:09,509 | INFO     | intersect: -34948976760.979225
[2025-11-24 14:19:06] 2025-11-24 19:18:09,510 | INFO     | chi2: 0.05359557414365888
[2025-11-24 14:19:06] 2025-11-24 19:18:09,510 | INFO     | current memory leak: 19.81 B/s (using 394 data points, chi2=0.05)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,510 | INFO     | could have reported an average CPU frequency of 2398 MHz (18 samples)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,510 | INFO     | ..............................
[2025-11-24 14:19:06] 2025-11-24 19:18:09,510 | INFO     | . Timing measurements:
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . get job = 0 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . initial setup = 2 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . payload setup = 7 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . stage-in = 0 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . payload execution = 25871 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . stage-out = 3 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | . log creation = 0 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,511 | INFO     | ..............................
[2025-11-24 14:19:06] 2025-11-24 19:18:09,592 | INFO     | 
[2025-11-24 14:19:06] 2025-11-24 19:18:09,592 | INFO     | job summary report
[2025-11-24 14:19:06] 2025-11-24 19:18:09,592 | INFO     | --------------------------------------------------
[2025-11-24 14:19:06] 2025-11-24 19:18:09,593 | INFO     | PanDA job id: 6893846211
[2025-11-24 14:19:06] 2025-11-24 19:18:09,593 | INFO     | task id: 47523449
[2025-11-24 14:19:06] 2025-11-24 19:18:09,593 | INFO     | errors: (none)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 14:19:06] 2025-11-24 19:18:09,593 | INFO     | pilot state: finished 
[2025-11-24 14:19:06] 2025-11-24 19:18:09,593 | INFO     | transexitcode: 0
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | exeerrorcode: 0
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | exeerrordiag: 
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | exitcode: 0
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | exitmsg: OK
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | cpuconsumptiontime: 296594 s
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | nevents: 1000
[2025-11-24 14:19:06] 2025-11-24 19:18:09,594 | INFO     | neventsw: 0
[2025-11-24 14:19:06] 2025-11-24 19:18:09,595 | INFO     | pid: 14038
[2025-11-24 14:19:06] 2025-11-24 19:18:09,595 | INFO     | pgrp: 14038
[2025-11-24 14:19:06] 2025-11-24 19:18:09,595 | INFO     | corecount: 12
[2025-11-24 14:19:06] 2025-11-24 19:18:09,595 | INFO     | event service: False
[2025-11-24 14:19:06] 2025-11-24 19:18:09,595 | INFO     | sizes: {0: 2284133, 1: 2284332, 5: 2284594, 11: 2284650, 25882: 2321941, 25883: 2321940, 25887: 2331118, 25890: 2331174, 25896: 2331420}
[2025-11-24 14:19:06] 2025-11-24 19:18:09,595 | INFO     | --------------------------------------------------
[2025-11-24 14:19:06] 2025-11-24 19:18:09,596 | INFO     | 
[2025-11-24 14:19:06] 2025-11-24 19:18:09,596 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 14:19:06] 2025-11-24 19:18:09,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,619 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,621 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,621 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,621 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,621 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,621 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,621 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,622 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 14:19:06] 2025-11-24 19:18:09,622 | INFO     | job 6893846211 has completed (purged errors)
[2025-11-24 14:19:06] 2025-11-24 19:18:09,622 | INFO     | overall cleanup function is called
[2025-11-24 14:19:06] 2025-11-24 19:18:10,636 | INFO     | --- collectZombieJob: --- 10, [14038]
[2025-11-24 14:19:06] 2025-11-24 19:18:10,636 | INFO     | zombie collector waiting for pid 14038
[2025-11-24 14:19:06] 2025-11-24 19:18:10,648 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 14:19:06] 2025-11-24 19:18:10,648 | INFO     | collected zombie processes
[2025-11-24 14:19:06] 2025-11-24 19:18:10,648 | INFO     | will attempt to kill all subprocesses of pid=14038
[2025-11-24 14:19:06] 2025-11-24 19:18:10,739 | INFO     | process IDs to be killed: [14038] (in reverse order)
[2025-11-24 14:19:06] 2025-11-24 19:18:10,789 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 14:19:06] 2025-11-24 19:18:10,790 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 14:19:06] 2025-11-24 19:18:10,794 | INFO     | did not find any defunct processes belonging to 14038
[2025-11-24 14:19:06] 2025-11-24 19:18:10,797 | INFO     | did not find any defunct processes belonging to 14038
[2025-11-24 14:19:06] 2025-11-24 19:18:10,799 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 14:19:06] 2025-11-24 19:18:10,799 | INFO     | ready for new job
[2025-11-24 14:19:06] 2025-11-24 19:18:10,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 14:19:06] 2025-11-24 19:18:10,801 | INFO     | ***************************************
[2025-11-24 14:19:06] 2025-11-24 19:18:10,802 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 14:19:06] 2025-11-24 19:18:10,802 | INFO     | ***************************************
[2025-11-24 14:19:06] 2025-11-24 19:18:10,802 | INFO     | 
[2025-11-24 14:19:06] 2025-11-24 19:18:10,802 | INFO     | architecture information:
[2025-11-24 14:19:06] 2025-11-24 19:18:10,803 | INFO     | executing command: cat /etc/os-release
[2025-11-24 14:19:06] 2025-11-24 19:18:10,817 | INFO     | cat /etc/os-release:
[2025-11-24 14:19:06] NAME="CentOS Linux"
[2025-11-24 14:19:06] VERSION="7 (Core)"
[2025-11-24 14:19:06] ID="centos"
[2025-11-24 14:19:06] ID_LIKE="rhel fedora"
[2025-11-24 14:19:06] VERSION_ID="7"
[2025-11-24 14:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 14:19:06] ANSI_COLOR="0;31"
[2025-11-24 14:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 14:19:06] HOME_URL="https://www.centos.org/"
[2025-11-24 14:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 14:19:06] 
[2025-11-24 14:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 14:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 14:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 14:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 14:19:06] 
[2025-11-24 14:19:06] 2025-11-24 19:18:10,818 | INFO     | ***************************************
[2025-11-24 14:19:06] 2025-11-24 19:18:11,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 14:19:06] 2025-11-24 19:18:11,421 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-24 14:19:06] 2025-11-24 19:18:11,422 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 14:19:06] 2025-11-24 19:18:11,422 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 14:19:06] 2025-11-24 19:18:11,422 | INFO     | update_server=False
[2025-11-24 14:19:06] 2025-11-24 19:18:11,422 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 14:19:06] 2025-11-24 19:18:11,422 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:19:06] 2025-11-24 19:18:11,550 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 14:19:06] 2025-11-24 19:18:11,550 | INFO     | aborting loop
[2025-11-24 14:19:06] 2025-11-24 19:18:11,749 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 14:19:06] 2025-11-24 19:18:11,809 | INFO     | all payload control threads have been joined
[2025-11-24 14:19:06] 2025-11-24 19:18:11,914 | INFO     | all data control threads have been joined
[2025-11-24 14:19:06] 2025-11-24 19:18:12,425 | INFO     | [job] queue monitor thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,428 | INFO     | [job] retrieve thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,552 | INFO     | [job] job monitor thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,574 | INFO     | [payload] failed_post thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,575 | INFO     | all job control threads have been joined
[2025-11-24 14:19:06] 2025-11-24 19:18:12,767 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,814 | INFO     | [payload] control thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,920 | INFO     | [data] control thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,953 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:12,962 | INFO     | [job] validate thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:13,112 | INFO     | [data] copytool_in thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:13,314 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:13,496 | INFO     | [payload] validate_post thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:13,581 | INFO     | [job] control thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:13,744 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:13,754 | INFO     | [data] copytool_out thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:14,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 14:19:06] 2025-11-24 19:18:18,236 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 14:19:06] 2025-11-24 19:18:42,256 | INFO     | PID=6721 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 14:19:06] 2025-11-24 19:18:42,257 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 14:19:06] 2025-11-24 19:18:42,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 14:19:06] 2025-11-24 19:18:42,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 14:19:06] 2025-11-24 19:18:59,886 | INFO     | [monitor] cgroup control has ended
[2025-11-24 14:19:06] 2025-11-24 19:19:00,795 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140341623289664)>', '<ExcThread(monitor, started 140341193725696)>']
[2025-11-24 14:19:06] 2025-11-24 19:19:01,354 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 14:19:06] 2025-11-24 19:19:01,354 | INFO     | [monitor] control thread has ended
[2025-11-24 14:19:06] 2025-11-24 19:19:05,820 | INFO     | all workflow threads have been joined
[2025-11-24 14:19:06] 2025-11-24 19:19:05,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 14:19:06] 2025-11-24 19:19:05,821 | INFO     | traces error code: 0
[2025-11-24 14:19:06] 2025-11-24 19:19:05,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 14:19:06] 2025-11-24 19:19:05,915 [wrapper] ==== pilot stdout END ====
[2025-11-24 14:19:06] 2025-11-24 19:19:05,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 14:19:06] 2025-11-24 19:19:05,922 [wrapper] pilotpid: 6721
[2025-11-24 14:19:06] 2025-11-24 19:19:05,926 [wrapper] Pilot exit status: 0
[2025-11-24 14:19:06] 2025-11-24 19:19:05,939 [wrapper] pandaids: 6893846211
[2025-11-24 14:19:06] 2025-11-24 19:19:05,985 [wrapper] cleanup supervisor_pilot  9484 6722
[2025-11-24 14:19:06] 2025-11-24 19:19:05,989 [wrapper] Test setup, not cleaning
[2025-11-24 14:19:06] 2025-11-24 19:19:05,992 [wrapper] apfmon messages muted
[2025-11-24 14:19:06] 2025-11-24 19:19:05,996 [wrapper] ==== wrapper stdout END ====
[2025-11-24 14:19:06] 2025-11-24 19:19:06,000 [wrapper] ==== wrapper stderr END ====
[2025-11-24 14:19:06]  *** Error codes and diagnostics ***
[2025-11-24 14:19:06]     "exeErrorCode": 0,
[2025-11-24 14:19:06]     "exeErrorDiag": "",
[2025-11-24 14:19:06]     "pilotErrorCode": 0,
[2025-11-24 14:19:06]     "pilotErrorDiag": "",
[2025-11-24 14:19:06]  *** Listing of results directory ***
[2025-11-24 14:19:06] total 1311160
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-24 14:19:06] -rwx------ 1 boincer umatlas     36292 Nov 20 05:19 runpilot2-wrapper.sh
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:21 queuedata.json
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas       100 Nov 24 07:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 14:19:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 07:05 run_atlas
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas       105 Nov 24 07:05 job.xml
[2025-11-24 14:19:06] -rw-r--r-- 2 boincer umatlas 407752963 Nov 24 07:06 EVNT.47493127._000218.pool.root.1
[2025-11-24 14:19:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 07:06 start_atlas.sh
[2025-11-24 14:19:06] drwxrwx--x 2 boincer umatlas      4096 Nov 24 07:06 shared
[2025-11-24 14:19:06] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 07:06 input.tar.gz
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas         0 Nov 24 07:06 boinc_lockfile
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas      2783 Nov 24 07:06 pandaJob.out
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas        57 Nov 24 07:06 setup.sh.local
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas    989803 Nov 24 07:06 agis_schedconf.cvmfs.json
[2025-11-24 14:19:06] drwx------ 5 boincer umatlas      4096 Nov 24 07:06 pilot3
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas       532 Nov 24 14:07 boinc_task_state.xml
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 14:10 init_data.xml
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas 919261659 Nov 24 14:17 HITS.47523449._002171.pool.root.1
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas      1063 Nov 24 14:17 memory_monitor_summary.json
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas   1516227 Nov 24 14:18 agis_ddmendpoints.agis.ALL.json
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas   2201005 Nov 24 14:18 log.47523449._002171.job.log.tgz.1
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas      8677 Nov 24 14:18 heartbeat.json
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas        95 Nov 24 14:18 pilot_heartbeat.json
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 14:18 boinc_mmap_file
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas        29 Nov 24 14:18 wrapper_checkpoint.txt
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas      4745 Nov 24 14:19 pilotlog.txt
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas   3645268 Nov 24 14:19 log.47523449._002171.job.log.1
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas       353 Nov 24 14:19 output.list
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas       620 Nov 24 14:19 runtime_log
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas   5867520 Nov 24 14:19 result.tar.gz
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 14:19 runtime_log.err
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas       670 Nov 24 14:19 iPkMDmgwGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWOGKDm59AP8m.diag
[2025-11-24 14:19:06] -rw-r--r-- 1 boincer umatlas     21337 Nov 24 14:19 stderr.txt
[2025-11-24 14:19:06] HITS file was successfully produced:
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas 919261659 Nov 24 14:17 shared/HITS.pool.root.1
[2025-11-24 14:19:06]  *** Contents of shared directory: ***
[2025-11-24 14:19:06] total 1302252
[2025-11-24 14:19:06] -rw-r--r-- 2 boincer umatlas 407752963 Nov 24 07:06 ATLAS.root_0
[2025-11-24 14:19:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 07:06 start_atlas.sh
[2025-11-24 14:19:06] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 07:06 input.tar.gz
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas 919261659 Nov 24 14:17 HITS.pool.root.1
[2025-11-24 14:19:06] -rw------- 1 boincer umatlas   5867520 Nov 24 14:19 result.tar.gz
14:19:08 (3030): run_atlas exited; CPU time 289896.631490
14:19:08 (3030): called boinc_finish(0)

</stderr_txt>
]]>

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