Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:32:32 (19163): wrapper (7.7.26015): starting
23:32:32 (19163): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:32:32] Arguments: --nthreads 8
[2025-11-26 23:32:32] Threads: 8
[2025-11-26 23:32:32] Checking for CVMFS
[2025-11-26 23:32:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:32:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:32:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:32:35] 2.11.2.0 2602 80419 98044 153337 0 84 15908858 25165824 1288 130560 11 24119083 99.881 13970837 1975 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 23:32:35] CVMFS is ok
[2025-11-26 23:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:32:35] Checking for apptainer binary...
[2025-11-26 23:32:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:32:35] Running /usr/bin/apptainer --version
[2025-11-26 23:32:35] apptainer version 1.3.2-1.el7
[2025-11-26 23:32:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:32:45] cg-vwn253.simple-grid.lan
[2025-11-26 23:32:45] apptainer works
[2025-11-26 23:32:45] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:32:45] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:32:45] Starting ATLAS job with PandaID=6893857607
[2025-11-26 23:32:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:03:20]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:03:20] 2025-11-27 22:02:30,842 | INFO     | monitor loop #5681: job 0:6893857607 is in state 'finished'
[2025-11-27 23:03:20] 2025-11-27 22:02:30,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:03:20] 2025-11-27 22:02:32,557 | INFO     | time since job start (84362s) is within the limit (172800.0s)
[2025-11-27 23:03:20] 2025-11-27 22:02:33,349 | INFO     | monitor loop #5682: job 0:6893857607 is in state 'finished'
[2025-11-27 23:03:20] 2025-11-27 22:02:33,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:03:20] 2025-11-27 22:02:34,570 | INFO     | time since job start (84364s) is within the limit (172800.0s)
[2025-11-27 23:03:20] 2025-11-27 22:02:35,860 | INFO     | monitor loop #5683: job 0:6893857607 is in state 'finished'
[2025-11-27 23:03:20] 2025-11-27 22:02:35,861 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:03:20] 2025-11-27 22:02:36,577 | INFO     | time since job start (84366s) is within the limit (172800.0s)
[2025-11-27 23:03:20] 2025-11-27 22:02:38,366 | INFO     | monitor loop #5684: job 0:6893857607 is in state 'finished'
[2025-11-27 23:03:20] 2025-11-27 22:02:38,367 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:03:20] 2025-11-27 22:02:38,583 | INFO     | time since job start (84368s) is within the limit (172800.0s)
[2025-11-27 23:03:20] 2025-11-27 22:02:40,593 | INFO     | time since job start (84370s) is within the limit (172800.0s)
[2025-11-27 23:03:20] 2025-11-27 22:02:40,871 | INFO     | monitor loop #5685: job 0:6893857607 is in state 'finished'
[2025-11-27 23:03:20] 2025-11-27 22:02:40,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,005 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:03:20] 2025-11-27 22:02:42,006 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 23:03:20] 2025-11-27 22:02:42,007 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893857607/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,008 | INFO     | extracted standard info from prmon json
[2025-11-27 23:03:20] 2025-11-27 22:02:42,008 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:03:20] 2025-11-27 22:02:42,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:03:20] 2025-11-27 22:02:42,046 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:03:20] 2025-11-27 22:02:42,057 | INFO     | sum of square deviations: 804337167351.7777
[2025-11-27 23:03:20] 2025-11-27 22:02:42,132 | INFO     | sum of deviations: 2783183787361.6924
[2025-11-27 23:03:20] 2025-11-27 22:02:42,133 | INFO     | mean x: 1764238985.5749636
[2025-11-27 23:03:20] 2025-11-27 22:02:42,133 | INFO     | mean y: 2836535.7409024746
[2025-11-27 23:03:20] 2025-11-27 22:02:42,133 | INFO     | intersect: -6101819000.506617
[2025-11-27 23:03:20] 2025-11-27 22:02:42,135 | INFO     | chi2: 22.556361446895316
[2025-11-27 23:03:20] 2025-11-27 22:02:42,137 | INFO     | sum of square deviations: 795588551463.479
[2025-11-27 23:03:20] 2025-11-27 22:02:42,204 | INFO     | sum of deviations: 3233576779288.7803
[2025-11-27 23:03:20] 2025-11-27 22:02:42,204 | INFO     | mean x: 1764238833.0788896
[2025-11-27 23:03:20] 2025-11-27 22:02:42,204 | INFO     | mean y: 2844385.53907962
[2025-11-27 23:03:20] 2025-11-27 22:02:42,205 | INFO     | intersect: -7167698369.594202
[2025-11-27 23:03:20] 2025-11-27 22:02:42,206 | INFO     | chi2: 19.35372614223812
[2025-11-27 23:03:20] 2025-11-27 22:02:42,206 | INFO     | current chi2=19.35372614223812 (change=14.198368438975386 %)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,206 | INFO     | right removable region: 1368
[2025-11-27 23:03:20] 2025-11-27 22:02:42,208 | INFO     | sum of square deviations: 795587650493.4788
[2025-11-27 23:03:20] 2025-11-27 22:02:42,283 | INFO     | sum of deviations: 2208932836502.8276
[2025-11-27 23:03:20] 2025-11-27 22:02:42,284 | INFO     | mean x: 1764239138.0788896
[2025-11-27 23:03:20] 2025-11-27 22:02:42,284 | INFO     | mean y: 2846544.1219868516
[2025-11-27 23:03:20] 2025-11-27 22:02:42,284 | INFO     | intersect: -4895527332.255634
[2025-11-27 23:03:20] 2025-11-27 22:02:42,286 | INFO     | chi2: 17.91237083605661
[2025-11-27 23:03:20] 2025-11-27 22:02:42,286 | INFO     | current chi2=17.91237083605661 (change=20.588385328777886 %)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,286 | INFO     | left removable region: 10
[2025-11-27 23:03:20] 2025-11-27 22:02:42,288 | INFO     | sum of square deviations: 776563605277.0731
[2025-11-27 23:03:20] 2025-11-27 22:02:42,359 | INFO     | sum of deviations: 2288821282817.5493
[2025-11-27 23:03:20] 2025-11-27 22:02:42,360 | INFO     | mean x: 1764239107.5876288
[2025-11-27 23:03:20] 2025-11-27 22:02:42,360 | INFO     | mean y: 2864485.6634756997
[2025-11-27 23:03:20] 2025-11-27 22:02:42,360 | INFO     | intersect: -5197003226.376494
[2025-11-27 23:03:20] 2025-11-27 22:02:42,362 | INFO     | chi2: 10.937209385412835
[2025-11-27 23:03:20] 2025-11-27 22:02:42,362 | INFO     | current memory leak: 2.95 B/s (using 1358 data points, chi2=10.94)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | ..............................
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . Timing measurements:
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . get job = 0 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . initial setup = 8 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . payload setup = 165 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . stage-in = 0 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . payload execution = 83913 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,364 | INFO     | . stage-out = 5 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,365 | INFO     | . log creation = 2 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,365 | INFO     | ..............................
[2025-11-27 23:03:20] 2025-11-27 22:02:42,578 | INFO     | 
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | job summary report
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | --------------------------------------------------
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | PanDA job id: 6893857607
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | task id: 47523449
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | errors: (none)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | pilot state: finished 
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | transexitcode: 0
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | exeerrorcode: 0
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | exeerrordiag: 
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | exitcode: 0
[2025-11-27 23:03:20] 2025-11-27 22:02:42,579 | INFO     | exitmsg: OK
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | cpuconsumptiontime: 317047 s
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | nevents: 1000
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | neventsw: 0
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | pid: 29561
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | pgrp: 29561
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | corecount: 8
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | event service: False
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | sizes: {0: 2283486, 1: 2284171, 2: 2284370, 12: 2284370, 23: 2284398, 34: 2284426, 45: 2284582, 55: 2284610, 66: 2284638, 77: 2284666, 88: 2284722, 93: 2285292, 98
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | --------------------------------------------------
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | 
[2025-11-27 23:03:20] 2025-11-27 22:02:42,580 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 23:03:20] 2025-11-27 22:02:42,600 | INFO     | time since job start (84372s) is within the limit (172800.0s)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,968 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,969 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,970 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:03:20] 2025-11-27 22:02:42,970 | INFO     | job 6893857607 has completed (purged errors)
[2025-11-27 23:03:20] 2025-11-27 22:02:42,970 | INFO     | overall cleanup function is called
[2025-11-27 23:03:20] 2025-11-27 22:02:43,992 | INFO     | --- collectZombieJob: --- 10, [29561]
[2025-11-27 23:03:20] 2025-11-27 22:02:43,993 | INFO     | zombie collector waiting for pid 29561
[2025-11-27 23:03:20] 2025-11-27 22:02:43,993 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:03:20] 2025-11-27 22:02:43,993 | INFO     | collected zombie processes
[2025-11-27 23:03:20] 2025-11-27 22:02:43,993 | INFO     | will attempt to kill all subprocesses of pid=29561
[2025-11-27 23:03:20] 2025-11-27 22:02:44,131 | INFO     | process IDs to be killed: [29561] (in reverse order)
[2025-11-27 23:03:20] 2025-11-27 22:02:44,938 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:03:20] 2025-11-27 22:02:44,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:03:20] 2025-11-27 22:02:44,941 | INFO     | did not find any defunct processes belonging to 29561
[2025-11-27 23:03:20] 2025-11-27 22:02:44,944 | INFO     | did not find any defunct processes belonging to 29561
[2025-11-27 23:03:20] 2025-11-27 22:02:44,993 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:03:20] 2025-11-27 22:02:44,994 | INFO     | ready for new job
[2025-11-27 23:03:20] 2025-11-27 22:02:44,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:03:20] 2025-11-27 22:02:44,999 | INFO     | ***************************************
[2025-11-27 23:03:20] 2025-11-27 22:02:44,999 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:03:20] 2025-11-27 22:02:44,999 | INFO     | ***************************************
[2025-11-27 23:03:20] 2025-11-27 22:02:44,999 | INFO     | 
[2025-11-27 23:03:20] 2025-11-27 22:02:45,000 | INFO     | pilot is running in a VM
[2025-11-27 23:03:20] 2025-11-27 22:02:45,000 | INFO     | architecture information:
[2025-11-27 23:03:20] 2025-11-27 22:02:45,010 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:03:20] 2025-11-27 22:02:45,300 | INFO     | cat /etc/os-release:
[2025-11-27 23:03:20] NAME="CentOS Linux"
[2025-11-27 23:03:20] VERSION="7 (Core)"
[2025-11-27 23:03:20] ID="centos"
[2025-11-27 23:03:20] ID_LIKE="rhel fedora"
[2025-11-27 23:03:20] VERSION_ID="7"
[2025-11-27 23:03:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:03:20] ANSI_COLOR="0;31"
[2025-11-27 23:03:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:03:20] HOME_URL="https://www.centos.org/"
[2025-11-27 23:03:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:03:20] 
[2025-11-27 23:03:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:03:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:03:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:03:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:03:20] 
[2025-11-27 23:03:20] 2025-11-27 22:02:45,300 | INFO     | ***************************************
[2025-11-27 23:03:20] 2025-11-27 22:02:45,803 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 23:03:20] 2025-11-27 22:02:46,015 | INFO     | sufficient remaining disk space (495375613952 B)
[2025-11-27 23:03:20] 2025-11-27 22:02:46,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:03:20] 2025-11-27 22:02:46,016 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:03:20] 2025-11-27 22:02:46,016 | INFO     | update_server=False
[2025-11-27 23:03:20] 2025-11-27 22:02:46,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:03:20] 2025-11-27 22:02:46,168 | INFO     | all payload control threads have been joined
[2025-11-27 23:03:20] 2025-11-27 22:02:46,245 | INFO     | all data control threads have been joined
[2025-11-27 23:03:20] 2025-11-27 22:02:46,901 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:03:20] 2025-11-27 22:02:46,902 | INFO     | aborting loop
[2025-11-27 23:03:20] 2025-11-27 22:02:46,920 | INFO     | all job control threads have been joined
[2025-11-27 23:03:20] 2025-11-27 22:02:47,022 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,174 | INFO     | [payload] control thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,251 | INFO     | [data] control thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:03:20] 2025-11-27 22:02:47,308 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:03:20] 2025-11-27 22:02:47,508 | INFO     | [job] validate thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,694 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,799 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:03:20] 2025-11-27 22:02:47,907 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:47,926 | INFO     | [job] control thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:48,003 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:48,207 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:48,400 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:48,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:48,489 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:48,504 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:49,296 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:51,808 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:03:20] 2025-11-27 22:02:56,987 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:03:20] 2025-11-27 22:02:57,460 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140273801144128)>', '<ExcThread(monitor, started 140273086621440)>']
[2025-11-27 23:03:20] 2025-11-27 22:03:02,486 | INFO     | all workflow threads have been joined
[2025-11-27 23:03:20] 2025-11-27 22:03:02,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:03:20] 2025-11-27 22:03:02,487 | INFO     | traces error code: 0
[2025-11-27 23:03:20] 2025-11-27 22:03:02,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:03:20] 2025-11-27 22:03:15,766 | INFO     | PID=22989 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:03:20] 2025-11-27 22:03:15,766 | INFO     | .. there are 9 such processes running
[2025-11-27 23:03:20] 2025-11-27 22:03:15,767 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:03:20] 2025-11-27 22:03:15,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:03:20] 2025-11-27 22:03:15,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:03:20] 2025-11-27 22:03:15,767 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:03:20] 2025-11-27 22:03:15,767 | INFO     | [monitor] control thread has ended
[2025-11-27 23:03:20] 2025-11-27 22:03:16,243 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:03:20] 2025-11-27 22:03:16,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:03:20] 2025-11-27 22:03:16,422 [wrapper] pilotpid: 22989
[2025-11-27 23:03:20] 2025-11-27 22:03:16,530 [wrapper] Pilot exit status: 0
[2025-11-27 23:03:20] 2025-11-27 22:03:16,769 [wrapper] pandaids: 6893857607
[2025-11-27 23:03:20] 2025-11-27 22:03:17,873 [wrapper] cleanup supervisor_pilot 32630 22990
[2025-11-27 23:03:20] 2025-11-27 22:03:17,954 [wrapper] Test setup, not cleaning
[2025-11-27 23:03:20] 2025-11-27 22:03:17,982 [wrapper] apfmon messages muted
[2025-11-27 23:03:20] 2025-11-27 22:03:18,070 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:03:20] 2025-11-27 22:03:18,187 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:03:20]  *** Error codes and diagnostics ***
[2025-11-27 23:03:20]     "exeErrorCode": 0,
[2025-11-27 23:03:20]     "exeErrorDiag": "",
[2025-11-27 23:03:20]     "pilotErrorCode": 0,
[2025-11-27 23:03:20]     "pilotErrorDiag": "",
[2025-11-27 23:03:20]  *** Listing of results directory ***
[2025-11-27 23:03:20] total 1328376
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc      5112 Nov 20 14:05 queuedata.json
[2025-11-27 23:03:20] -rwx------. 1 boinc boinc     36292 Nov 20 14:06 runpilot2-wrapper.sh
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc       100 Nov 26 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:03:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 23:32 run_atlas
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc       105 Nov 26 23:32 job.xml
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc      6389 Nov 26 23:32 init_data.xml
[2025-11-27 23:03:20] -rw-r--r--. 2 boinc boinc 409850275 Nov 26 23:32 EVNT.47493127._000495.pool.root.1
[2025-11-27 23:03:20] -rw-r--r--. 2 boinc boinc     15847 Nov 26 23:32 start_atlas.sh
[2025-11-27 23:03:20] drwxrwx--x. 2 boinc boinc        68 Nov 26 23:32 shared
[2025-11-27 23:03:20] -rw-r--r--. 2 boinc boinc    590103 Nov 26 23:32 input.tar.gz
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc         0 Nov 26 23:32 boinc_lockfile
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc      2785 Nov 26 23:32 pandaJob.out
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc    991546 Nov 26 23:36 agis_schedconf.cvmfs.json
[2025-11-27 23:03:20] drwx------. 5 boinc boinc      4096 Nov 26 23:36 pilot3
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc       533 Nov 27 22:35 boinc_task_state.xml
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc 919123401 Nov 27 23:00 HITS.47523449._004944.pool.root.1
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc      1028 Nov 27 23:01 memory_monitor_summary.json
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc   1516240 Nov 27 23:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc   2452589 Nov 27 23:01 log.47523449._004944.job.log.tgz.1
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc      8641 Nov 27 23:02 heartbeat.json
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc      8192 Nov 27 23:03 boinc_mmap_file
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc        29 Nov 27 23:03 wrapper_checkpoint.txt
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc        95 Nov 27 23:03 pilot_heartbeat.json
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc       820 Nov 27 23:03 pilotlog.txt
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc  11236102 Nov 27 23:03 log.47523449._004944.job.log.1
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc       353 Nov 27 23:03 output.list
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc       620 Nov 27 23:03 runtime_log
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc  13711360 Nov 27 23:03 result.tar.gz
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc       662 Nov 27 23:03 yLdMDmZXJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmagGKDmbYS5jm.diag
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc      8817 Nov 27 23:03 runtime_log.err
[2025-11-27 23:03:20] -rw-r--r--. 1 boinc boinc     21439 Nov 27 23:03 stderr.txt
[2025-11-27 23:03:20] HITS file was successfully produced:
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc 919123401 Nov 27 23:00 shared/HITS.pool.root.1
[2025-11-27 23:03:20]  *** Contents of shared directory: ***
[2025-11-27 23:03:20] total 1311820
[2025-11-27 23:03:20] -rw-r--r--. 2 boinc boinc 409850275 Nov 26 23:32 ATLAS.root_0
[2025-11-27 23:03:20] -rw-r--r--. 2 boinc boinc     15847 Nov 26 23:32 start_atlas.sh
[2025-11-27 23:03:20] -rw-r--r--. 2 boinc boinc    590103 Nov 26 23:32 input.tar.gz
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc 919123401 Nov 27 23:00 HITS.pool.root.1
[2025-11-27 23:03:20] -rw-------. 1 boinc boinc  13711360 Nov 27 23:03 result.tar.gz
23:03:21 (19163): run_atlas exited; CPU time 317626.383090
23:03:21 (19163): called boinc_finish(0)

</stderr_txt>
]]>

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