Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:58:38 (13126): wrapper (7.7.26015): starting
16:58:38 (13126): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:58:38] Arguments: --nthreads 8
[2025-11-26 16:58:38] Threads: 8
[2025-11-26 16:58:38] Checking for CVMFS
[2025-11-26 16:58:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:58:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:58:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:58:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:58:38] 2.11.2.0 14339 285600 139760 153326 1 85 15208886 25165825 805 130560 18 155348763 99.890 81093676 3729 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 16:58:38] CVMFS is ok
[2025-11-26 16:58:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:58:38] Checking for apptainer binary...
[2025-11-26 16:58:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:58:38] Running /usr/bin/apptainer --version
[2025-11-26 16:58:38] apptainer version 1.3.2-1.el7
[2025-11-26 16:58:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:58:40] cg-vwn496.simple-grid.lan
[2025-11-26 16:58:40] apptainer works
[2025-11-26 16:58:40] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:58:40] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:58:40] Starting ATLAS job with PandaID=6895364461
[2025-11-26 16:58:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:38:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:38:16] 2025-11-27 12:37:28,275 | INFO     | time since job start (74311s) is within the limit (172800.0s)
[2025-11-27 13:38:16] 2025-11-27 12:37:30,136 | INFO     | monitor loop #4987: job 0:6895364461 is in state 'finished'
[2025-11-27 13:38:16] 2025-11-27 12:37:30,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:38:16] 2025-11-27 12:37:30,286 | INFO     | time since job start (74313s) is within the limit (172800.0s)
[2025-11-27 13:38:16] 2025-11-27 12:37:32,292 | INFO     | time since job start (74315s) is within the limit (172800.0s)
[2025-11-27 13:38:16] 2025-11-27 12:37:32,647 | INFO     | monitor loop #4988: job 0:6895364461 is in state 'finished'
[2025-11-27 13:38:16] 2025-11-27 12:37:32,647 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:38:16] 2025-11-27 12:37:34,303 | INFO     | time since job start (74317s) is within the limit (172800.0s)
[2025-11-27 13:38:16] 2025-11-27 12:37:35,154 | INFO     | monitor loop #4989: job 0:6895364461 is in state 'finished'
[2025-11-27 13:38:16] 2025-11-27 12:37:35,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:38:16] 2025-11-27 12:37:36,310 | INFO     | time since job start (74319s) is within the limit (172800.0s)
[2025-11-27 13:38:16] 2025-11-27 12:37:36,310 | INFO     | 74320s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 13:38:16] 2025-11-27 12:37:37,659 | INFO     | monitor loop #4990: job 0:6895364461 is in state 'finished'
[2025-11-27 13:38:16] 2025-11-27 12:37:37,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:38:16] 2025-11-27 12:37:37,903 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:38:16] 2025-11-27 12:37:37,904 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-11-27 13:38:16] 2025-11-27 12:37:37,906 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6895364461/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:38:16] 2025-11-27 12:37:37,907 | INFO     | extracted standard info from prmon json
[2025-11-27 13:38:16] 2025-11-27 12:37:37,907 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:38:16] 2025-11-27 12:37:37,907 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:38:16] 2025-11-27 12:37:37,936 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:38:16] 2025-11-27 12:37:37,938 | INFO     | sum of square deviations: 557542733299.8607
[2025-11-27 13:38:16] 2025-11-27 12:37:37,989 | INFO     | sum of deviations: 1477056092990.9358
[2025-11-27 13:38:16] 2025-11-27 12:37:37,989 | INFO     | mean x: 1764209835.5419407
[2025-11-27 13:38:16] 2025-11-27 12:37:37,990 | INFO     | mean y: 2851593.814967105
[2025-11-27 13:38:16] 2025-11-27 12:37:37,990 | INFO     | intersect: -4670937034.868092
[2025-11-27 13:38:16] 2025-11-27 12:37:37,991 | INFO     | chi2: 15.418648897207778
[2025-11-27 13:38:16] 2025-11-27 12:37:37,993 | INFO     | sum of square deviations: 550693763399.4114
[2025-11-27 13:38:16] 2025-11-27 12:37:38,044 | INFO     | sum of deviations: 1879118284111.1628
[2025-11-27 13:38:16] 2025-11-27 12:37:38,044 | INFO     | mean x: 1764209683.0462427
[2025-11-27 13:38:16] 2025-11-27 12:37:38,044 | INFO     | mean y: 2860546.9256812553
[2025-11-27 13:38:16] 2025-11-27 12:37:38,044 | INFO     | intersect: -6017107160.632522
[2025-11-27 13:38:16] 2025-11-27 12:37:38,049 | INFO     | chi2: 12.184460281619058
[2025-11-27 13:38:16] 2025-11-27 12:37:38,049 | INFO     | current chi2=12.184460281619058 (change=20.975823738838823 %)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,049 | INFO     | right removable region: 1210
[2025-11-27 13:38:16] 2025-11-27 12:37:38,051 | INFO     | sum of square deviations: 550693064462.5012
[2025-11-27 13:38:16] 2025-11-27 12:37:38,124 | INFO     | sum of deviations: 1136994576347.4648
[2025-11-27 13:38:16] 2025-11-27 12:37:38,124 | INFO     | mean x: 1764209988.045417
[2025-11-27 13:38:16] 2025-11-27 12:37:38,124 | INFO     | mean y: 2859157.2097440134
[2025-11-27 13:38:16] 2025-11-27 12:37:38,124 | INFO     | intersect: -3639636667.399019
[2025-11-27 13:38:16] 2025-11-27 12:37:38,126 | INFO     | chi2: 13.067702715878763
[2025-11-27 13:38:16] 2025-11-27 12:37:38,126 | INFO     | current chi2=13.067702715878763 (change=15.247420166333486 %)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,126 | INFO     | left removable region: 10
[2025-11-27 13:38:16] 2025-11-27 12:37:38,128 | INFO     | sum of square deviations: 535822867228.8992
[2025-11-27 13:38:16] 2025-11-27 12:37:38,180 | INFO     | sum of deviations: 1555849749994.7375
[2025-11-27 13:38:16] 2025-11-27 12:37:38,180 | INFO     | mean x: 1764209957.5508332
[2025-11-27 13:38:16] 2025-11-27 12:37:38,180 | INFO     | mean y: 2871977.0125
[2025-11-27 13:38:16] 2025-11-27 12:37:38,181 | INFO     | intersect: -5119801557.973297
[2025-11-27 13:38:16] 2025-11-27 12:37:38,188 | INFO     | chi2: 8.93939212521789
[2025-11-27 13:38:16] 2025-11-27 12:37:38,188 | INFO     | current memory leak: 2.90 B/s (using 1200 data points, chi2=8.94)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,190 | INFO     | could have reported an average CPU frequency of 2249 MHz (41 samples)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,190 | INFO     | ..............................
[2025-11-27 13:38:16] 2025-11-27 12:37:38,190 | INFO     | . Timing measurements:
[2025-11-27 13:38:16] 2025-11-27 12:37:38,190 | INFO     | . get job = 0 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,190 | INFO     | . initial setup = 1 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,191 | INFO     | . payload setup = 9 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,191 | INFO     | . stage-in = 0 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,191 | INFO     | . payload execution = 74186 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,191 | INFO     | . stage-out = 5 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,191 | INFO     | . log creation = 1 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,191 | INFO     | ..............................
[2025-11-27 13:38:16] 2025-11-27 12:37:38,327 | INFO     | time since job start (74321s) is within the limit (172800.0s)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,334 | INFO     | 
[2025-11-27 13:38:16] 2025-11-27 12:37:38,334 | INFO     | job summary report
[2025-11-27 13:38:16] 2025-11-27 12:37:38,334 | INFO     | --------------------------------------------------
[2025-11-27 13:38:16] 2025-11-27 12:37:38,334 | INFO     | PanDA job id: 6895364461
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | task id: 47556137
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | errors: (none)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | pilot state: finished 
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | transexitcode: 0
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | exeerrorcode: 0
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | exeerrordiag: 
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | exitcode: 0
[2025-11-27 13:38:16] 2025-11-27 12:37:38,335 | INFO     | exitmsg: OK
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | cpuconsumptiontime: 281693 s
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | nevents: 1000
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | neventsw: 0
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | pid: 23327
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | pgrp: 23327
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | corecount: 8
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | event service: False
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | sizes: {0: 2284316, 7: 2284578, 11: 2284606, 74200: 2340955, 74206: 2349951, 74208: 2350007, 74303: 2350477}
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | --------------------------------------------------
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | 
[2025-11-27 13:38:16] 2025-11-27 12:37:38,336 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-27 13:38:16] 2025-11-27 12:37:38,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,880 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | job 6895364461 has completed (purged errors)
[2025-11-27 13:38:16] 2025-11-27 12:37:38,881 | INFO     | overall cleanup function is called
[2025-11-27 13:38:16] 2025-11-27 12:37:39,907 | INFO     | --- collectZombieJob: --- 10, [23327]
[2025-11-27 13:38:16] 2025-11-27 12:37:39,907 | INFO     | zombie collector waiting for pid 23327
[2025-11-27 13:38:16] 2025-11-27 12:37:39,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:38:16] 2025-11-27 12:37:39,907 | INFO     | collected zombie processes
[2025-11-27 13:38:16] 2025-11-27 12:37:39,907 | INFO     | will attempt to kill all subprocesses of pid=23327
[2025-11-27 13:38:16] 2025-11-27 12:37:40,022 | INFO     | process IDs to be killed: [23327] (in reverse order)
[2025-11-27 13:38:16] 2025-11-27 12:37:40,937 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:38:16] 2025-11-27 12:37:40,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:38:16] 2025-11-27 12:37:40,940 | INFO     | did not find any defunct processes belonging to 23327
[2025-11-27 13:38:16] 2025-11-27 12:37:40,948 | INFO     | did not find any defunct processes belonging to 23327
[2025-11-27 13:38:16] 2025-11-27 12:37:40,972 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:38:16] 2025-11-27 12:37:40,972 | INFO     | ready for new job
[2025-11-27 13:38:16] 2025-11-27 12:37:40,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:38:16] 2025-11-27 12:37:40,977 | INFO     | ***************************************
[2025-11-27 13:38:16] 2025-11-27 12:37:40,977 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:38:16] 2025-11-27 12:37:40,977 | INFO     | ***************************************
[2025-11-27 13:38:16] 2025-11-27 12:37:40,977 | INFO     | 
[2025-11-27 13:38:16] 2025-11-27 12:37:40,977 | INFO     | pilot is running in a VM
[2025-11-27 13:38:16] 2025-11-27 12:37:40,977 | INFO     | architecture information:
[2025-11-27 13:38:16] 2025-11-27 12:37:40,978 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:38:16] 2025-11-27 12:37:41,149 | INFO     | cat /etc/os-release:
[2025-11-27 13:38:16] NAME="CentOS Linux"
[2025-11-27 13:38:16] VERSION="7 (Core)"
[2025-11-27 13:38:16] ID="centos"
[2025-11-27 13:38:16] ID_LIKE="rhel fedora"
[2025-11-27 13:38:16] VERSION_ID="7"
[2025-11-27 13:38:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:38:16] ANSI_COLOR="0;31"
[2025-11-27 13:38:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:38:16] HOME_URL="https://www.centos.org/"
[2025-11-27 13:38:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:38:16] 
[2025-11-27 13:38:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:38:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:38:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:38:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:38:16] 
[2025-11-27 13:38:16] 2025-11-27 12:37:41,150 | INFO     | ***************************************
[2025-11-27 13:38:16] 2025-11-27 12:37:41,653 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-27 13:38:16] 2025-11-27 12:37:41,789 | INFO     | sufficient remaining disk space (496456695808 B)
[2025-11-27 13:38:16] 2025-11-27 12:37:41,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:38:16] 2025-11-27 12:37:41,790 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:38:16] 2025-11-27 12:37:41,790 | INFO     | update_server=False
[2025-11-27 13:38:16] 2025-11-27 12:37:41,790 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:38:16] 2025-11-27 12:37:41,790 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:38:16] 2025-11-27 12:37:41,791 | INFO     | aborting loop
[2025-11-27 13:38:16] 2025-11-27 12:37:42,068 | INFO     | all data control threads have been joined
[2025-11-27 13:38:16] 2025-11-27 12:37:42,368 | INFO     | all job control threads have been joined
[2025-11-27 13:38:16] 2025-11-27 12:37:42,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:38:16] 2025-11-27 12:37:42,611 | INFO     | all payload control threads have been joined
[2025-11-27 13:38:16] 2025-11-27 12:37:42,795 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:42,798 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:42,968 | INFO     | [job] validate thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:43,061 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:43,074 | INFO     | [data] control thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:43,229 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:43,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:38:16] 2025-11-27 12:37:43,374 | INFO     | [job] control thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:43,617 | INFO     | [payload] control thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:43,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:38:16] 2025-11-27 12:37:43,781 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:44,000 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:44,204 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:44,224 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:44,355 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:44,388 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:47,765 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:37:52,270 | INFO     | job.realtimelogging is not enabled
[2025-11-27 13:38:16] 2025-11-27 12:37:53,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:38:16] 2025-11-27 12:38:07,158 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:38:16] 2025-11-27 12:38:08,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140676068521792)>', '<ExcThread(monitor, started 140675270043392)>']
[2025-11-27 13:38:16] 2025-11-27 12:38:11,502 | INFO     | PID=16867 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 13:38:16] 2025-11-27 12:38:11,503 | INFO     | .. there are 9 such processes running
[2025-11-27 13:38:16] 2025-11-27 12:38:11,504 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:38:16] 2025-11-27 12:38:11,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:38:16] 2025-11-27 12:38:11,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:38:16] 2025-11-27 12:38:11,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:38:16] 2025-11-27 12:38:11,504 | INFO     | [monitor] control thread has ended
[2025-11-27 13:38:16] 2025-11-27 12:38:13,067 | INFO     | all workflow threads have been joined
[2025-11-27 13:38:16] 2025-11-27 12:38:13,067 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:38:16] 2025-11-27 12:38:13,067 | INFO     | traces error code: 0
[2025-11-27 13:38:16] 2025-11-27 12:38:13,067 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:38:16] 2025-11-27 12:38:13,414 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:38:16] 2025-11-27 12:38:13,456 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:38:16] 2025-11-27 12:38:13,559 [wrapper] pilotpid: 16867
[2025-11-27 13:38:16] 2025-11-27 12:38:13,639 [wrapper] Pilot exit status: 0
[2025-11-27 13:38:16] 2025-11-27 12:38:14,060 [wrapper] pandaids: 6895364461
[2025-11-27 13:38:16] 2025-11-27 12:38:14,305 [wrapper] cleanup supervisor_pilot 25508 16868
[2025-11-27 13:38:16] 2025-11-27 12:38:14,314 [wrapper] Test setup, not cleaning
[2025-11-27 13:38:16] 2025-11-27 12:38:14,346 [wrapper] apfmon messages muted
[2025-11-27 13:38:16] 2025-11-27 12:38:14,355 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:38:16] 2025-11-27 12:38:14,447 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:38:16]  *** Error codes and diagnostics ***
[2025-11-27 13:38:16]     "exeErrorCode": 0,
[2025-11-27 13:38:16]     "exeErrorDiag": "",
[2025-11-27 13:38:16]     "pilotErrorCode": 0,
[2025-11-27 13:38:16]     "pilotErrorDiag": "",
[2025-11-27 13:38:16]  *** Listing of results directory ***
[2025-11-27 13:38:16] total 1326112
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc    576529 Nov 23 16:18 pilot3.tar.gz
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc      5112 Nov 23 16:59 queuedata.json
[2025-11-27 13:38:16] -rwx------. 1 boinc boinc     36292 Nov 23 17:00 runpilot2-wrapper.sh
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc       100 Nov 26 16:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:38:16] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 16:58 run_atlas
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc       105 Nov 26 16:58 job.xml
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc      6393 Nov 26 16:58 init_data.xml
[2025-11-27 13:38:16] -rw-r--r--. 2 boinc boinc 410508429 Nov 26 16:58 EVNT.47483658._000807.pool.root.1
[2025-11-27 13:38:16] -rw-r--r--. 2 boinc boinc     15847 Nov 26 16:58 start_atlas.sh
[2025-11-27 13:38:16] drwxrwx--x. 2 boinc boinc        68 Nov 26 16:58 shared
[2025-11-27 13:38:16] -rw-r--r--. 2 boinc boinc    590105 Nov 26 16:58 input.tar.gz
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc         0 Nov 26 16:58 boinc_lockfile
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc      2786 Nov 26 16:58 pandaJob.out
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc    991855 Nov 26 16:58 agis_schedconf.cvmfs.json
[2025-11-27 13:38:16] drwx------. 5 boinc boinc      4096 Nov 26 16:58 pilot3
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc       533 Nov 27 13:11 boinc_task_state.xml
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc 919038289 Nov 27 13:34 HITS.47556137._007934.pool.root.1
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc      1029 Nov 27 13:35 memory_monitor_summary.json
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc   1516240 Nov 27 13:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc   2322373 Nov 27 13:36 log.47556137._007934.job.log.tgz.1
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc      8618 Nov 27 13:37 heartbeat.json
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc      8192 Nov 27 13:37 boinc_mmap_file
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc        29 Nov 27 13:37 wrapper_checkpoint.txt
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc        95 Nov 27 13:38 pilot_heartbeat.json
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc      4957 Nov 27 13:38 pilotlog.txt
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc   9921918 Nov 27 13:38 log.47556137._007934.job.log.1
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc       353 Nov 27 13:38 output.list
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc       620 Nov 27 13:38 runtime_log
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc  12267520 Nov 27 13:38 result.tar.gz
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc       661 Nov 27 13:38 sHJNDmpgRh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTdIKDm4yKgFo.diag
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc      8833 Nov 27 13:38 runtime_log.err
[2025-11-27 13:38:16] -rw-r--r--. 1 boinc boinc     21359 Nov 27 13:38 stderr.txt
[2025-11-27 13:38:16] HITS file was successfully produced:
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc 919038289 Nov 27 13:34 shared/HITS.pool.root.1
[2025-11-27 13:38:16]  *** Contents of shared directory: ***
[2025-11-27 13:38:16] total 1310964
[2025-11-27 13:38:16] -rw-r--r--. 2 boinc boinc 410508429 Nov 26 16:58 ATLAS.root_0
[2025-11-27 13:38:16] -rw-r--r--. 2 boinc boinc     15847 Nov 26 16:58 start_atlas.sh
[2025-11-27 13:38:16] -rw-r--r--. 2 boinc boinc    590105 Nov 26 16:58 input.tar.gz
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc 919038289 Nov 27 13:34 HITS.pool.root.1
[2025-11-27 13:38:16] -rw-------. 1 boinc boinc  12267520 Nov 27 13:38 result.tar.gz
13:38:18 (13126): run_atlas exited; CPU time 282110.380603
13:38:18 (13126): called boinc_finish(0)

</stderr_txt>
]]>

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