Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
09:12:43 (1599197): wrapper (7.7.26015): starting
09:12:43 (1599197): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 09:12:43] Arguments: --nthreads 3
[2025-11-27 09:12:43] Threads: 3
[2025-11-27 09:12:43] Checking for CVMFS
[2025-11-27 09:12:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 09:12:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 09:12:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 09:12:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 09:12:43] 2.9.2.0 3958803 12349 94408 153354 0 81 34002065 36864000 0 130560 1 4564381 99.935 607460 757 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 09:12:43] CVMFS is ok
[2025-11-27 09:12:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:12:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:12:43] Further information can be found at the LHC@home message board.
[2025-11-27 09:12:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:12:43] Checking for apptainer binary...
[2025-11-27 09:12:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 09:12:43] Running /usr/bin/apptainer --version
[2025-11-27 09:12:43] apptainer version 1.4.1-1.1
[2025-11-27 09:12:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:12:43] atlasA223b
[2025-11-27 09:12:43] apptainer works
[2025-11-27 09:12:43] Set ATHENA_PROC_NUMBER=3
[2025-11-27 09:12:43] Set ATHENA_CORE_NUMBER=3
[2025-11-27 09:12:43] Starting ATLAS job with PandaID=6894270908
[2025-11-27 09:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:31:32]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | INFO     | aborting loop
[2025-11-27 17:31:32] 2025-11-27 16:30:42,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:31:32] 2025-11-27 16:30:43,271 | INFO     | all data control threads have been joined
[2025-11-27 17:31:32] 2025-11-27 16:30:43,538 | INFO     | all payload control threads have been joined
[2025-11-27 17:31:32] 2025-11-27 16:30:43,974 | INFO     | all job control threads have been joined
[2025-11-27 17:31:32] 2025-11-27 16:30:44,002 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,002 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,002 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,080 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:31:32] 2025-11-27 16:30:44,277 | INFO     | [data] control thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,334 | INFO     | [job] validate thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,337 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,543 | INFO     | [payload] control thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,665 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,814 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,850 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:44,979 | INFO     | [job] control thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:45,015 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:45,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:31:32] 2025-11-27 16:30:46,131 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:49,252 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:30:53,759 | INFO     | job.realtimelogging is not enabled
[2025-11-27 17:31:32] 2025-11-27 16:30:54,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:31:32] 2025-11-27 16:31:25,659 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:31:32] 2025-11-27 16:31:27,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140208326084416)>', '<ExcThread(monitor, started 140207353472768)>']
[2025-11-27 17:31:32] 2025-11-27 16:31:28,221 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:31:32] 2025-11-27 16:31:28,221 | INFO     | [monitor] control thread has ended
[2025-11-27 17:31:32] 2025-11-27 16:31:32,642 | INFO     | all workflow threads have been joined
[2025-11-27 17:31:32] 2025-11-27 16:31:32,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:31:32] 2025-11-27 16:31:32,642 | INFO     | traces error code: 0
[2025-11-27 17:31:32] 2025-11-27 16:31:32,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:31:32] 2025-11-27 16:31:32,690 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:31:32] 2025-11-27 16:31:32,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:31:32] 2025-11-27 16:31:32,696 [wrapper] pilotpid: 1602922
[2025-11-27 17:31:32] 2025-11-27 16:31:32,698 [wrapper] Pilot exit status: 0
[2025-11-27 17:31:32] 2025-11-27 16:31:32,706 [wrapper] pandaids: 6894270908
[2025-11-27 17:31:32] 2025-11-27 16:31:32,727 [wrapper] cleanup supervisor_pilot 1673854 1602923
[2025-11-27 17:31:32] 2025-11-27 16:31:32,730 [wrapper] Test setup, not cleaning
[2025-11-27 17:31:32] 2025-11-27 16:31:32,732 [wrapper] apfmon messages muted
[2025-11-27 17:31:32] 2025-11-27 16:31:32,735 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:31:32] 2025-11-27 16:31:32,737 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:31:32]  *** Error codes and diagnostics ***
[2025-11-27 17:31:32]     "exeErrorCode": 0,
[2025-11-27 17:31:32]     "exeErrorDiag": "",
[2025-11-27 17:31:32]     "pilotErrorCode": 0,
[2025-11-27 17:31:32]     "pilotErrorDiag": "",
[2025-11-27 17:31:32]  *** Listing of results directory ***
[2025-11-27 17:31:32] total 1307888
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc    576529 Nov 21 08:02 pilot3.tar.gz
[2025-11-27 17:31:32] -rwx------ 1 boinc boinc     36292 Nov 21 08:05 runpilot2-wrapper.sh
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc      5112 Nov 21 08:05 queuedata.json
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc       100 Nov 27 09:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:31:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 09:12 run_atlas
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc       105 Nov 27 09:12 job.xml
[2025-11-27 17:31:32] -rw-r--r-- 2 boinc boinc 408765547 Nov 27 09:12 EVNT.47493127._002288.pool.root.1
[2025-11-27 17:31:32] -rw-r--r-- 2 boinc boinc    590094 Nov 27 09:12 input.tar.gz
[2025-11-27 17:31:32] -rw-r--r-- 2 boinc boinc     15847 Nov 27 09:12 start_atlas.sh
[2025-11-27 17:31:32] drwxrwx--x 2 boinc boinc      4096 Nov 27 09:12 shared
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc         0 Nov 27 09:12 boinc_setup_complete
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc      6450 Nov 27 09:12 init_data.xml
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc         0 Nov 27 09:12 boinc_lockfile
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc      2786 Nov 27 09:12 pandaJob.out
[2025-11-27 17:31:32] -rw------- 1 boinc boinc    991570 Nov 27 09:12 agis_schedconf.cvmfs.json
[2025-11-27 17:31:32] drwx------ 5 boinc boinc      4096 Nov 27 09:12 pilot3
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc       531 Nov 27 17:27 boinc_task_state.xml
[2025-11-27 17:31:32] -rw------- 1 boinc boinc        95 Nov 27 17:29 pilot_heartbeat.json
[2025-11-27 17:31:32] -rw------- 1 boinc boinc 915849778 Nov 27 17:30 HITS.47533967._002599.pool.root.1
[2025-11-27 17:31:32] -rw------- 1 boinc boinc      1029 Nov 27 17:30 memory_monitor_summary.json
[2025-11-27 17:31:32] -rw------- 1 boinc boinc   1516240 Nov 27 17:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:31:32] -rw------- 1 boinc boinc   1181463 Nov 27 17:30 log.47533967._002599.job.log.tgz.1
[2025-11-27 17:31:32] -rw------- 1 boinc boinc      8572 Nov 27 17:30 heartbeat.json
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc      8192 Nov 27 17:31 boinc_mmap_file
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc        28 Nov 27 17:31 wrapper_checkpoint.txt
[2025-11-27 17:31:32] -rw------- 1 boinc boinc      4628 Nov 27 17:31 pilotlog.txt
[2025-11-27 17:31:32] -rw------- 1 boinc boinc   4197534 Nov 27 17:31 log.47533967._002599.job.log.1
[2025-11-27 17:31:32] -rw------- 1 boinc boinc       353 Nov 27 17:31 output.list
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc       620 Nov 27 17:31 runtime_log
[2025-11-27 17:31:32] -rw------- 1 boinc boinc   5396480 Nov 27 17:31 result.tar.gz
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc      8918 Nov 27 17:31 runtime_log.err
[2025-11-27 17:31:32] -rw------- 1 boinc boinc       670 Nov 27 17:31 MYaKDmQOag8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPAJKDmCleJBo.diag
[2025-11-27 17:31:32] -rw-r--r-- 1 boinc boinc      7356 Nov 27 17:31 stderr.txt
[2025-11-27 17:31:32] HITS file was successfully produced:
[2025-11-27 17:31:32] -rw------- 1 boinc boinc 915849778 Nov 27 17:30 shared/HITS.pool.root.1
[2025-11-27 17:31:32]  *** Contents of shared directory: ***
[2025-11-27 17:31:32] total 1299452
[2025-11-27 17:31:32] -rw-r--r-- 2 boinc boinc 408765547 Nov 27 09:12 ATLAS.root_0
[2025-11-27 17:31:32] -rw-r--r-- 2 boinc boinc    590094 Nov 27 09:12 input.tar.gz
[2025-11-27 17:31:32] -rw-r--r-- 2 boinc boinc     15847 Nov 27 09:12 start_atlas.sh
[2025-11-27 17:31:32] -rw------- 1 boinc boinc 915849778 Nov 27 17:30 HITS.pool.root.1
[2025-11-27 17:31:32] -rw------- 1 boinc boinc   5396480 Nov 27 17:31 result.tar.gz
17:31:34 (1599197): run_atlas exited; CPU time 88348.269971
17:31:34 (1599197): called boinc_finish(0)

</stderr_txt>
]]>

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