Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:31:55 (3357816): wrapper (7.7.26015): starting
17:31:55 (3357816): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 17:31:55] Arguments: --nthreads 8
[2025-11-24 17:31:55] Threads: 8
[2025-11-24 17:31:55] Checking for CVMFS
[2025-11-24 17:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 17:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 17:31:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 17:31:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 17:31:56] 2.13.3.0 5308 6159 218072 153261 0 232 23652965 32935937 17674 16776704 0 14941422 99.423 27338729 41391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 17:31:56] CVMFS is ok
[2025-11-24 17:31:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 17:31:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 17:31:56] Further information can be found at the LHC@home message board.
[2025-11-24 17:31:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 17:31:56] Checking for apptainer binary...
[2025-11-24 17:31:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 17:31:56] Running /usr/bin/apptainer --version
[2025-11-24 17:31:56] apptainer version 1.4.4-1.el9
[2025-11-24 17:31:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 17:31:56] c6-1-24-1.aglt2.org
[2025-11-24 17:31:56] apptainer works
[2025-11-24 17:31:56] Set ATHENA_PROC_NUMBER=8
[2025-11-24 17:31:56] Set ATHENA_CORE_NUMBER=8
[2025-11-24 17:31:56] Starting ATLAS job with PandaID=6895364250
[2025-11-24 17:31:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 10:46:25]  *** The last 200 lines of the pilot log: ***
[2025-11-25 10:46:25] 2025-11-25 15:45:37,552 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895364250/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 10:46:25] 2025-11-25 15:45:37,553 | INFO     | extracted standard info from prmon json
[2025-11-25 10:46:25] 2025-11-25 15:45:37,553 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 10:46:25] 2025-11-25 15:45:37,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 10:46:25] 2025-11-25 15:45:37,583 | INFO     | fitting pss+swap vs Time
[2025-11-25 10:46:25] 2025-11-25 15:45:37,584 | INFO     | sum of square deviations: 324269221247.0047
[2025-11-25 10:46:25] 2025-11-25 15:45:37,622 | INFO     | sum of deviations: 1926619317114.416
[2025-11-25 10:46:25] 2025-11-25 15:45:37,622 | INFO     | mean x: 1764054539.5270936
[2025-11-25 10:46:25] 2025-11-25 15:45:37,622 | INFO     | mean y: 2970920.075862069
[2025-11-25 10:46:25] 2025-11-25 15:45:37,622 | INFO     | intersect: -10478016264.666601
[2025-11-25 10:46:25] 2025-11-25 15:45:37,623 | INFO     | chi2: 9.571719723077653
[2025-11-25 10:46:25] 2025-11-25 15:45:37,624 | INFO     | sum of square deviations: 319501427837.78705
[2025-11-25 10:46:25] 2025-11-25 15:45:37,661 | INFO     | sum of deviations: 2278408535394.8184
[2025-11-25 10:46:25] 2025-11-25 15:45:37,662 | INFO     | mean x: 1764054387.0346534
[2025-11-25 10:46:25] 2025-11-25 15:45:37,662 | INFO     | mean y: 2982170.4336633664
[2025-11-25 10:46:25] 2025-11-25 15:45:37,662 | INFO     | intersect: -12576731790.534992
[2025-11-25 10:46:25] 2025-11-25 15:45:37,663 | INFO     | chi2: 6.347485306052136
[2025-11-25 10:46:25] 2025-11-25 15:45:37,663 | INFO     | current chi2=6.347485306052136 (change=33.685006564199824 %)
[2025-11-25 10:46:25] 2025-11-25 15:45:37,664 | INFO     | sum of square deviations: 314780612053.45245
[2025-11-25 10:46:25] 2025-11-25 15:45:37,701 | INFO     | sum of deviations: 2591767948052.252
[2025-11-25 10:46:25] 2025-11-25 15:45:37,701 | INFO     | mean x: 1764054234.5422885
[2025-11-25 10:46:25] 2025-11-25 15:45:37,701 | INFO     | mean y: 2992284.794029851
[2025-11-25 10:46:25] 2025-11-25 15:45:37,701 | INFO     | intersect: -14521470304.840256
[2025-11-25 10:46:25] 2025-11-25 15:45:37,702 | INFO     | chi2: 3.5844495149091418
[2025-11-25 10:46:25] 2025-11-25 15:45:37,702 | INFO     | current chi2=3.5844495149091418 (change=43.52961303444882 %)
[2025-11-25 10:46:25] 2025-11-25 15:45:37,703 | INFO     | sum of square deviations: 310106296363.88385
[2025-11-25 10:46:25] 2025-11-25 15:45:37,743 | INFO     | sum of deviations: 2706231503852.6943
[2025-11-25 10:46:25] 2025-11-25 15:45:37,743 | INFO     | mean x: 1764054082.046
[2025-11-25 10:46:25] 2025-11-25 15:45:37,743 | INFO     | mean y: 2996015.137
[2025-11-25 10:46:25] 2025-11-25 15:45:37,744 | INFO     | intersect: -15391527692.730616
[2025-11-25 10:46:25] 2025-11-25 15:45:37,745 | INFO     | chi2: 3.0594556474654775
[2025-11-25 10:46:25] 2025-11-25 15:45:37,746 | INFO     | current chi2=3.0594556474654775 (change=14.646429396201768 %)
[2025-11-25 10:46:25] 2025-11-25 15:45:37,746 | INFO     | right removable region: 999
[2025-11-25 10:46:25] 2025-11-25 15:45:37,751 | INFO     | sum of square deviations: 319500544010.85565
[2025-11-25 10:46:25] 2025-11-25 15:45:37,790 | INFO     | sum of deviations: 1631302036968.9612
[2025-11-25 10:46:25] 2025-11-25 15:45:37,790 | INFO     | mean x: 1764054692.0336633
[2025-11-25 10:46:25] 2025-11-25 15:45:37,791 | INFO     | mean y: 2980353.530693069
[2025-11-25 10:46:25] 2025-11-25 15:45:37,791 | INFO     | intersect: -9003908887.763973
[2025-11-25 10:46:25] 2025-11-25 15:45:37,851 | INFO     | chi2: 7.266415064276375
[2025-11-25 10:46:25] 2025-11-25 15:45:37,851 | INFO     | current chi2=7.266415064276375 (change=24.084539931138305 %)
[2025-11-25 10:46:25] 2025-11-25 15:45:37,851 | INFO     | left removable region: 10
[2025-11-25 10:46:25] 2025-11-25 15:45:37,852 | INFO     | sum of square deviations: 299984910264.13574
[2025-11-25 10:46:25] 2025-11-25 15:45:38,014 | INFO     | time since job start (61991s) is within the limit (172800.0s)
[2025-11-25 10:46:25] 2025-11-25 15:45:38,029 | INFO     | sum of deviations: 2331732223221.9634
[2025-11-25 10:46:25] 2025-11-25 15:45:38,032 | INFO     | mean x: 1764054356.5561173
[2025-11-25 10:46:25] 2025-11-25 15:45:38,032 | INFO     | mean y: 3008452.865520728
[2025-11-25 10:46:25] 2025-11-25 15:45:38,032 | INFO     | intersect: -13708689189.109991
[2025-11-25 10:46:25] 2025-11-25 15:45:38,033 | INFO     | chi2: 0.6551395704709754
[2025-11-25 10:46:25] 2025-11-25 15:45:38,033 | INFO     | current memory leak: 7.77 B/s (using 989 data points, chi2=0.66)
[2025-11-25 10:46:25] 2025-11-25 15:45:38,034 | INFO     | could have reported an average CPU frequency of 2913 MHz (37 samples)
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | ..............................
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . Timing measurements:
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . get job = 0 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . initial setup = 3 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . payload setup = 16 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . stage-in = 0 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . payload execution = 61902 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . stage-out = 4 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | . log creation = 0 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,043 | INFO     | ..............................
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | 
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | job summary report
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | --------------------------------------------------
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | PanDA job id: 6895364250
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | task id: 47556137
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | errors: (none)
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | pilot state: finished 
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | transexitcode: 0
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | exeerrorcode: 0
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | exeerrordiag: 
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | exitcode: 0
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | exitmsg: OK
[2025-11-25 10:46:25] 2025-11-25 15:45:38,295 | INFO     | cpuconsumptiontime: 245416 s
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | nevents: 1000
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | neventsw: 0
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | pid: 3376573
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | pgrp: 3376573
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | corecount: 8
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | event service: False
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | sizes: {0: 2284083, 1: 2284338, 2: 2284338, 13: 2284366, 15: 2284684, 23: 2284712, 61922: 2338010, 61927: 2347009, 61928: 2347065, 61956: 2347311}
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | --------------------------------------------------
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | 
[2025-11-25 10:46:25] 2025-11-25 15:45:38,296 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-25 10:46:25] 2025-11-25 15:45:38,439 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,439 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 10:46:25] 2025-11-25 15:45:38,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 10:46:25] 2025-11-25 15:45:38,442 | INFO     | job 6895364250 has completed (purged errors)
[2025-11-25 10:46:25] 2025-11-25 15:45:38,442 | INFO     | overall cleanup function is called
[2025-11-25 10:46:25] 2025-11-25 15:45:39,579 | INFO     | --- collectZombieJob: --- 10, [3376573]
[2025-11-25 10:46:25] 2025-11-25 15:45:39,579 | INFO     | zombie collector waiting for pid 3376573
[2025-11-25 10:46:25] 2025-11-25 15:45:39,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 10:46:25] 2025-11-25 15:45:39,579 | INFO     | collected zombie processes
[2025-11-25 10:46:25] 2025-11-25 15:45:39,579 | INFO     | will attempt to kill all subprocesses of pid=3376573
[2025-11-25 10:46:25] 2025-11-25 15:45:40,436 | INFO     | PID=3368631 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 10:46:25] 2025-11-25 15:45:40,436 | INFO     | .. there are 33 such processes running
[2025-11-25 10:46:25] 2025-11-25 15:45:40,596 | INFO     | process IDs to be killed: [3376573] (in reverse order)
[2025-11-25 10:46:25] 2025-11-25 15:45:40,943 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 10:46:25] 2025-11-25 15:45:40,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 10:46:25] 2025-11-25 15:45:40,993 | INFO     | did not find any defunct processes belonging to 3376573
[2025-11-25 10:46:25] 2025-11-25 15:45:41,012 | INFO     | did not find any defunct processes belonging to 3376573
[2025-11-25 10:46:25] 2025-11-25 15:45:41,017 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 10:46:25] 2025-11-25 15:45:41,017 | INFO     | ready for new job
[2025-11-25 10:46:25] 2025-11-25 15:45:41,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 10:46:25] 2025-11-25 15:45:41,026 | INFO     | ***************************************
[2025-11-25 10:46:25] 2025-11-25 15:45:41,026 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 10:46:25] 2025-11-25 15:45:41,026 | INFO     | ***************************************
[2025-11-25 10:46:25] 2025-11-25 15:45:41,026 | INFO     | 
[2025-11-25 10:46:25] 2025-11-25 15:45:41,034 | INFO     | architecture information:
[2025-11-25 10:46:25] 2025-11-25 15:45:41,038 | INFO     | executing command: cat /etc/os-release
[2025-11-25 10:46:25] 2025-11-25 15:45:41,145 | INFO     | cat /etc/os-release:
[2025-11-25 10:46:25] NAME="CentOS Linux"
[2025-11-25 10:46:25] VERSION="7 (Core)"
[2025-11-25 10:46:25] ID="centos"
[2025-11-25 10:46:25] ID_LIKE="rhel fedora"
[2025-11-25 10:46:25] VERSION_ID="7"
[2025-11-25 10:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 10:46:25] ANSI_COLOR="0;31"
[2025-11-25 10:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 10:46:25] HOME_URL="https://www.centos.org/"
[2025-11-25 10:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 10:46:25] 
[2025-11-25 10:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 10:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 10:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 10:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 10:46:25] 
[2025-11-25 10:46:25] 2025-11-25 15:45:41,145 | INFO     | ***************************************
[2025-11-25 10:46:25] 2025-11-25 15:45:41,648 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-25 10:46:25] 2025-11-25 15:45:41,733 | INFO     | sufficient remaining disk space (69545754624 B)
[2025-11-25 10:46:25] 2025-11-25 15:45:41,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 10:46:25] 2025-11-25 15:45:41,734 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 10:46:25] 2025-11-25 15:45:41,734 | INFO     | update_server=False
[2025-11-25 10:46:25] 2025-11-25 15:45:41,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 10:46:25] 2025-11-25 15:45:41,933 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 10:46:25] 2025-11-25 15:45:41,933 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 10:46:25] 2025-11-25 15:45:41,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:46:25] 2025-11-25 15:45:41,933 | INFO     | will abort loop
[2025-11-25 10:46:25] 2025-11-25 15:45:42,272 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 10:46:25] 2025-11-25 15:45:42,611 | INFO     | all data control threads have been joined
[2025-11-25 10:46:25] 2025-11-25 15:45:42,706 | INFO     | all job control threads have been joined
[2025-11-25 10:46:25] 2025-11-25 15:45:42,740 | INFO     | [job] retrieve thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:42,891 | INFO     | all payload control threads have been joined
[2025-11-25 10:46:25] 2025-11-25 15:45:42,938 | INFO     | [payload] failed_post thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:42,938 | INFO     | [job] job monitor thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,064 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,309 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 10:46:25] 2025-11-25 15:45:43,495 | INFO     | [job] validate thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,512 | INFO     | [data] copytool_in thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,562 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,617 | INFO     | [data] control thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,714 | INFO     | [job] control thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,722 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 10:46:25] 2025-11-25 15:45:43,897 | INFO     | [payload] control thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:43,923 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:44,217 | INFO     | [payload] validate_post thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:44,288 | INFO     | [data] copytool_out thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:44,356 | INFO     | [job] queue monitor thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:45:47,730 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 10:46:25] 2025-11-25 15:46:13,121 | INFO     | PID=3368631 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 10:46:25] 2025-11-25 15:46:13,122 | INFO     | .. there are 33 such processes running
[2025-11-25 10:46:25] 2025-11-25 15:46:13,122 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 10:46:25] 2025-11-25 15:46:13,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 10:46:25] 2025-11-25 15:46:13,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 10:46:25] 2025-11-25 15:46:18,011 | INFO     | [monitor] cgroup control has ended
[2025-11-25 10:46:25] 2025-11-25 15:46:18,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163133011776)>', '<ExcThread(monitor, started 140162491213568)>']
[2025-11-25 10:46:25] 2025-11-25 15:46:19,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 10:46:25] 2025-11-25 15:46:19,168 | INFO     | [monitor] control thread has ended
[2025-11-25 10:46:25] 2025-11-25 15:46:23,630 | INFO     | all workflow threads have been joined
[2025-11-25 10:46:25] 2025-11-25 15:46:23,630 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 10:46:25] 2025-11-25 15:46:23,630 | INFO     | traces error code: 0
[2025-11-25 10:46:25] 2025-11-25 15:46:23,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 10:46:25] 2025-11-25 15:46:24,420 [wrapper] ==== pilot stdout END ====
[2025-11-25 10:46:25] 2025-11-25 15:46:24,441 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 10:46:25] 2025-11-25 15:46:24,466 [wrapper] pilotpid: 3368631
[2025-11-25 10:46:25] 2025-11-25 15:46:24,497 [wrapper] Pilot exit status: 0
[2025-11-25 10:46:25] 2025-11-25 15:46:24,721 [wrapper] pandaids: 6895364250
[2025-11-25 10:46:25] 2025-11-25 15:46:24,982 [wrapper] cleanup supervisor_pilot 2516410 3368632
[2025-11-25 10:46:25] 2025-11-25 15:46:24,986 [wrapper] Test setup, not cleaning
[2025-11-25 10:46:25] 2025-11-25 15:46:24,989 [wrapper] apfmon messages muted
[2025-11-25 10:46:25] 2025-11-25 15:46:24,991 [wrapper] ==== wrapper stdout END ====
[2025-11-25 10:46:25] 2025-11-25 15:46:24,994 [wrapper] ==== wrapper stderr END ====
[2025-11-25 10:46:25]  *** Error codes and diagnostics ***
[2025-11-25 10:46:25]     "exeErrorCode": 0,
[2025-11-25 10:46:25]     "exeErrorDiag": "",
[2025-11-25 10:46:25]     "pilotErrorCode": 0,
[2025-11-25 10:46:25]     "pilotErrorDiag": "",
[2025-11-25 10:46:25]  *** Listing of results directory ***
[2025-11-25 10:46:25] total 1328080
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 10:18 pilot3.tar.gz
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 10:53 queuedata.json
[2025-11-25 10:46:25] -rwx------. 1 boincer umatlas     36292 Nov 23 10:54 runpilot2-wrapper.sh
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas       100 Nov 24 17:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 10:46:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 17:31 run_atlas
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas       105 Nov 24 17:31 job.xml
[2025-11-25 10:46:25] -rw-r--r--. 2 boincer umatlas 411438865 Nov 24 17:31 EVNT.47483658._000805.pool.root.1
[2025-11-25 10:46:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:31 start_atlas.sh
[2025-11-25 10:46:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 17:31 shared
[2025-11-25 10:46:25] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 17:31 input.tar.gz
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas         0 Nov 24 17:31 boinc_lockfile
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 17:31 pandaJob.out
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas        57 Nov 24 17:31 setup.sh.local
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas    991801 Nov 24 17:32 agis_schedconf.cvmfs.json
[2025-11-25 10:46:25] drwx------. 5 boincer umatlas      4096 Nov 24 17:32 pilot3
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas       533 Nov 25 10:26 boinc_task_state.xml
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas 924321137 Nov 25 10:44 HITS.47556137._007913.pool.root.1
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas      1057 Nov 25 10:45 memory_monitor_summary.json
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas   1516240 Nov 25 10:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas   2159768 Nov 25 10:45 log.47556137._007913.job.log.tgz.1
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas        95 Nov 25 10:45 pilot_heartbeat.json
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas      8621 Nov 25 10:45 heartbeat.json
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas      6843 Nov 25 10:45 init_data.xml
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 10:46 boinc_mmap_file
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas      5010 Nov 25 10:46 pilotlog.txt
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas        29 Nov 25 10:46 wrapper_checkpoint.txt
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas   7974683 Nov 25 10:46 log.47556137._007913.job.log.1
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas       353 Nov 25 10:46 output.list
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas       620 Nov 25 10:46 runtime_log
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas  10158080 Nov 25 10:46 result.tar.gz
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 10:46 runtime_log.err
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas       661 Nov 25 10:46 aQEODmjaRh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEdIKDmReZE3m.diag
[2025-11-25 10:46:25] -rw-r--r--. 1 boincer umatlas     21423 Nov 25 10:46 stderr.txt
[2025-11-25 10:46:25] HITS file was successfully produced:
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas 924321137 Nov 25 10:44 shared/HITS.pool.root.1
[2025-11-25 10:46:25]  *** Contents of shared directory: ***
[2025-11-25 10:46:25] total 1314980
[2025-11-25 10:46:25] -rw-r--r--. 2 boincer umatlas 411438865 Nov 24 17:31 ATLAS.root_0
[2025-11-25 10:46:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 17:31 start_atlas.sh
[2025-11-25 10:46:25] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 17:31 input.tar.gz
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas 924321137 Nov 25 10:44 HITS.pool.root.1
[2025-11-25 10:46:25] -rw-------. 1 boincer umatlas  10158080 Nov 25 10:46 result.tar.gz
10:46:26 (3357816): run_atlas exited; CPU time 246833.076466
10:46:26 (3357816): called boinc_finish(0)

</stderr_txt>
]]>

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