Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:10:09 (2634835): wrapper (7.7.26015): starting
08:10:09 (2634835): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 08:10:09] Arguments: --nthreads 8
[2025-11-24 08:10:09] Threads: 8
[2025-11-24 08:10:09] Checking for CVMFS
[2025-11-24 08:10:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 08:10:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 08:10:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 08:10:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 08:10:11] 2.13.3.0 13122 27213 365344 153246 1 519 22341732 32935936 35336 16776704 0 132240520 99.570 145539762 36182 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-24 08:10:11] CVMFS is ok
[2025-11-24 08:10:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 08:10:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 08:10:11] Further information can be found at the LHC@home message board.
[2025-11-24 08:10:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 08:10:11] Checking for apptainer binary...
[2025-11-24 08:10:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 08:10:11] Running /usr/bin/apptainer --version
[2025-11-24 08:10:11] apptainer version 1.4.4-1.el9
[2025-11-24 08:10:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 08:10:13] c6-8-25-2.aglt2.org
[2025-11-24 08:10:13] apptainer works
[2025-11-24 08:10:13] Set ATHENA_PROC_NUMBER=8
[2025-11-24 08:10:13] Set ATHENA_CORE_NUMBER=8
[2025-11-24 08:10:13] Starting ATLAS job with PandaID=6895344249
[2025-11-24 08:10:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:24:36]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:24:36] 2025-11-25 05:23:43,335 | INFO     | time since job start (58348s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:45,342 | INFO     | time since job start (58350s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:45,420 | INFO     | monitor loop #3367: job 0:6895344249 is in state 'finished'
[2025-11-25 00:24:36] 2025-11-25 05:23:45,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:24:36] 2025-11-25 05:23:47,349 | INFO     | time since job start (58352s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:47,925 | INFO     | monitor loop #3368: job 0:6895344249 is in state 'finished'
[2025-11-25 00:24:36] 2025-11-25 05:23:47,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:24:36] 2025-11-25 05:23:49,358 | INFO     | time since job start (58354s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:50,436 | INFO     | monitor loop #3369: job 0:6895344249 is in state 'finished'
[2025-11-25 00:24:36] 2025-11-25 05:23:50,437 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:24:36] 2025-11-25 05:23:51,367 | INFO     | time since job start (58356s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:52,941 | INFO     | monitor loop #3370: job 0:6895344249 is in state 'finished'
[2025-11-25 00:24:36] 2025-11-25 05:23:52,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:24:36] 2025-11-25 05:23:53,376 | INFO     | time since job start (58358s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,047 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 00:24:36] 2025-11-25 05:23:55,088 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2603.1368020833324
[2025-11-25 00:24:36] 2025-11-25 05:23:55,149 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6895344249/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,150 | INFO     | extracted standard info from prmon json
[2025-11-25 00:24:36] 2025-11-25 05:23:55,150 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:24:36] 2025-11-25 05:23:55,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:24:36] 2025-11-25 05:23:55,209 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:24:36] 2025-11-25 05:23:55,220 | INFO     | sum of square deviations: 269231259023.5942
[2025-11-25 00:24:36] 2025-11-25 05:23:55,403 | INFO     | sum of deviations: 173431785320.72806
[2025-11-25 00:24:36] 2025-11-25 05:23:55,403 | INFO     | mean x: 1764019076.9402516
[2025-11-25 00:24:36] 2025-11-25 05:23:55,404 | INFO     | mean y: 2848085.5566037735
[2025-11-25 00:24:36] 2025-11-25 05:23:55,404 | INFO     | intersect: -1133487193.5008688
[2025-11-25 00:24:36] 2025-11-25 05:23:55,409 | INFO     | chi2: 22.384876782058726
[2025-11-25 00:24:36] 2025-11-25 05:23:55,411 | INFO     | sum of square deviations: 265020592220.56274
[2025-11-25 00:24:36] 2025-11-25 05:23:55,433 | INFO     | time since job start (58360s) is within the limit (172800.0s)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,447 | INFO     | sum of deviations: 524578743500.98663
[2025-11-25 00:24:36] 2025-11-25 05:23:55,452 | INFO     | mean x: 1764018924.4467862
[2025-11-25 00:24:36] 2025-11-25 05:23:55,452 | INFO     | mean y: 2860799.2571127503
[2025-11-25 00:24:36] 2025-11-25 05:23:55,452 | INFO     | intersect: -3488818179.8922606
[2025-11-25 00:24:36] 2025-11-25 05:23:55,453 | INFO     | chi2: 18.262831918073335
[2025-11-25 00:24:36] 2025-11-25 05:23:55,454 | INFO     | current chi2=18.262831918073335 (change=18.41441837771996 %)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,454 | INFO     | right removable region: 948
[2025-11-25 00:24:36] 2025-11-25 05:23:55,455 | INFO     | sum of square deviations: 265019812150.6674
[2025-11-25 00:24:36] 2025-11-25 05:23:55,499 | INFO     | sum of deviations: -187218377688.659
[2025-11-25 00:24:36] 2025-11-25 05:23:55,500 | INFO     | mean x: 1764019229.4478397
[2025-11-25 00:24:36] 2025-11-25 05:23:55,500 | INFO     | mean y: 2861142.6533192834
[2025-11-25 00:24:36] 2025-11-25 05:23:55,500 | INFO     | intersect: 1249020120.9906347
[2025-11-25 00:24:36] 2025-11-25 05:23:55,501 | INFO     | chi2: 18.745163253392917
[2025-11-25 00:24:36] 2025-11-25 05:23:55,502 | INFO     | current chi2=18.745163253392917 (change=16.25969874260378 %)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,502 | INFO     | left removable region: 10
[2025-11-25 00:24:36] 2025-11-25 05:23:55,503 | INFO     | sum of square deviations: 255910968558.2937
[2025-11-25 00:24:36] 2025-11-25 05:23:55,539 | INFO     | monitor loop #3371: job 0:6895344249 is in state 'finished'
[2025-11-25 00:24:36] 2025-11-25 05:23:55,540 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,541 | INFO     | sum of deviations: 97003524237.87811
[2025-11-25 00:24:36] 2025-11-25 05:23:55,541 | INFO     | mean x: 1764019198.957356
[2025-11-25 00:24:36] 2025-11-25 05:23:55,542 | INFO     | mean y: 2880839.3219616204
[2025-11-25 00:24:36] 2025-11-25 05:23:55,542 | INFO     | intersect: -665773888.8678691
[2025-11-25 00:24:36] 2025-11-25 05:23:55,543 | INFO     | chi2: 13.430392532628252
[2025-11-25 00:24:36] 2025-11-25 05:23:55,543 | INFO     | current memory leak: 0.38 B/s (using 938 data points, chi2=13.43)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | could have reported an average CPU frequency of 2627 MHz (35 samples)
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | ..............................
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . Timing measurements:
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . get job = 0 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . initial setup = 4 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . payload setup = 42 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . stage-in = 0 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . payload execution = 58188 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,549 | INFO     | . stage-out = 20 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,550 | INFO     | . log creation = 3 s
[2025-11-25 00:24:36] 2025-11-25 05:23:55,550 | INFO     | ..............................
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | 
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | job summary report
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | --------------------------------------------------
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | PanDA job id: 6895344249
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | task id: 47556137
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | errors: (none)
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | pilot state: finished 
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | transexitcode: 0
[2025-11-25 00:24:36] 2025-11-25 05:23:56,151 | INFO     | exeerrorcode: 0
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | exeerrordiag: 
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | exitcode: 0
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | exitmsg: OK
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | cpuconsumptiontime: 257896 s
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | nevents: 1000
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | neventsw: 0
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | pid: 2652512
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | pgrp: 2652512
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | corecount: 8
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | event service: False
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | sizes: {0: 2284088, 1: 2284287, 12: 2284287, 24: 2284315, 31: 2284605, 35: 2284633, 58235: 2335925, 58237: 2335924, 58257: 2344974, 58261: 2345030, 58299: 2345276}
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | --------------------------------------------------
[2025-11-25 00:24:36] 2025-11-25 05:23:56,152 | INFO     | 
[2025-11-25 00:24:36] 2025-11-25 05:23:56,153 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-25 00:24:36] 2025-11-25 05:23:56,243 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,245 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:24:36] 2025-11-25 05:23:56,245 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,245 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:24:36] 2025-11-25 05:23:56,245 | INFO     | job 6895344249 has completed (purged errors)
[2025-11-25 00:24:36] 2025-11-25 05:23:56,245 | INFO     | overall cleanup function is called
[2025-11-25 00:24:36] 2025-11-25 05:23:57,295 | INFO     | --- collectZombieJob: --- 10, [2652512]
[2025-11-25 00:24:36] 2025-11-25 05:23:57,298 | INFO     | zombie collector waiting for pid 2652512
[2025-11-25 00:24:36] 2025-11-25 05:23:57,298 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:24:36] 2025-11-25 05:23:57,299 | INFO     | collected zombie processes
[2025-11-25 00:24:36] 2025-11-25 05:23:57,299 | INFO     | will attempt to kill all subprocesses of pid=2652512
[2025-11-25 00:24:36] 2025-11-25 05:23:58,479 | INFO     | process IDs to be killed: [2652512] (in reverse order)
[2025-11-25 00:24:36] 2025-11-25 05:23:58,829 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:24:36] 2025-11-25 05:23:58,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:24:36] 2025-11-25 05:23:58,861 | INFO     | did not find any defunct processes belonging to 2652512
[2025-11-25 00:24:36] 2025-11-25 05:23:58,951 | INFO     | did not find any defunct processes belonging to 2652512
[2025-11-25 00:24:36] 2025-11-25 05:23:58,957 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:24:36] 2025-11-25 05:23:58,958 | INFO     | ready for new job
[2025-11-25 00:24:36] 2025-11-25 05:23:58,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:24:36] 2025-11-25 05:23:58,992 | INFO     | ***************************************
[2025-11-25 00:24:36] 2025-11-25 05:23:58,992 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:24:36] 2025-11-25 05:23:58,992 | INFO     | ***************************************
[2025-11-25 00:24:36] 2025-11-25 05:23:58,993 | INFO     | 
[2025-11-25 00:24:36] 2025-11-25 05:23:59,034 | INFO     | architecture information:
[2025-11-25 00:24:36] 2025-11-25 05:23:59,046 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:24:36] 2025-11-25 05:23:59,138 | INFO     | cat /etc/os-release:
[2025-11-25 00:24:36] NAME="CentOS Linux"
[2025-11-25 00:24:36] VERSION="7 (Core)"
[2025-11-25 00:24:36] ID="centos"
[2025-11-25 00:24:36] ID_LIKE="rhel fedora"
[2025-11-25 00:24:36] VERSION_ID="7"
[2025-11-25 00:24:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:24:36] ANSI_COLOR="0;31"
[2025-11-25 00:24:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:24:36] HOME_URL="https://www.centos.org/"
[2025-11-25 00:24:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:24:36] 
[2025-11-25 00:24:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:24:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:24:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:24:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:24:36] 
[2025-11-25 00:24:36] 2025-11-25 05:23:59,139 | INFO     | ***************************************
[2025-11-25 00:24:36] 2025-11-25 05:23:59,643 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-25 00:24:36] 2025-11-25 05:23:59,700 | INFO     | sufficient remaining disk space (65436385280 B)
[2025-11-25 00:24:36] 2025-11-25 05:23:59,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:24:36] 2025-11-25 05:23:59,700 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:24:36] 2025-11-25 05:23:59,700 | INFO     | update_server=False
[2025-11-25 00:24:36] 2025-11-25 05:23:59,700 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:24:36] 2025-11-25 05:23:59,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:24:36] 2025-11-25 05:23:59,709 | INFO     | aborting loop
[2025-11-25 00:24:36] 2025-11-25 05:23:59,800 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:24:36] 2025-11-25 05:23:59,972 | INFO     | all data control threads have been joined
[2025-11-25 00:24:36] 2025-11-25 05:24:00,068 | INFO     | all job control threads have been joined
[2025-11-25 00:24:36] 2025-11-25 05:24:00,405 | INFO     | all payload control threads have been joined
[2025-11-25 00:24:36] 2025-11-25 05:24:00,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:24:36] 2025-11-25 05:24:00,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:24:36] 2025-11-25 05:24:00,707 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:00,733 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:00,998 | INFO     | [data] control thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,071 | INFO     | [job] validate thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,074 | INFO     | [job] control thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,099 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,110 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,173 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:24:36] 2025-11-25 05:24:01,193 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,198 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,411 | INFO     | [payload] control thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:01,544 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:02,132 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:02,209 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:02,212 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:02,596 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:04,525 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:24:36] 2025-11-25 05:24:06,315 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279602603840)>', '<ExcThread(monitor, started 140279109633792)>']
[2025-11-25 00:24:36] 2025-11-25 05:24:11,341 | INFO     | all workflow threads have been joined
[2025-11-25 00:24:36] 2025-11-25 05:24:11,342 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:24:36] 2025-11-25 05:24:11,342 | INFO     | traces error code: 0
[2025-11-25 00:24:36] 2025-11-25 05:24:11,343 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:24:36] 2025-11-25 05:24:34,512 | INFO     | PID=2642936 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 00:24:36] 2025-11-25 05:24:34,512 | INFO     | .. there are 55 such processes running
[2025-11-25 00:24:36] 2025-11-25 05:24:34,512 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:24:36] 2025-11-25 05:24:34,512 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:24:36] 2025-11-25 05:24:34,513 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:24:36] 2025-11-25 05:24:34,513 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:24:36] 2025-11-25 05:24:34,513 | INFO     | [monitor] control thread has ended
[2025-11-25 00:24:36] 2025-11-25 05:24:35,030 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:24:36] 2025-11-25 05:24:35,080 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:24:36] 2025-11-25 05:24:35,106 [wrapper] pilotpid: 2642936
[2025-11-25 00:24:36] 2025-11-25 05:24:35,148 [wrapper] Pilot exit status: 0
[2025-11-25 00:24:36] 2025-11-25 05:24:35,277 [wrapper] pandaids: 6895344249
[2025-11-25 00:24:36] 2025-11-25 05:24:35,549 [wrapper] cleanup supervisor_pilot 2538833 2642937
[2025-11-25 00:24:36] 2025-11-25 05:24:35,598 [wrapper] Test setup, not cleaning
[2025-11-25 00:24:36] 2025-11-25 05:24:35,612 [wrapper] apfmon messages muted
[2025-11-25 00:24:36] 2025-11-25 05:24:35,624 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:24:36] 2025-11-25 05:24:35,632 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:24:36]  *** Error codes and diagnostics ***
[2025-11-25 00:24:36]     "exeErrorCode": 0,
[2025-11-25 00:24:36]     "exeErrorDiag": "",
[2025-11-25 00:24:36]     "pilotErrorCode": 0,
[2025-11-25 00:24:36]     "pilotErrorDiag": "",
[2025-11-25 00:24:36]  *** Listing of results directory ***
[2025-11-25 00:24:36] total 1321440
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 11:54 pilot3.tar.gz
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 11:55 queuedata.json
[2025-11-25 00:24:36] -rwx------. 1 boincer umatlas     36292 Nov 22 11:56 runpilot2-wrapper.sh
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas       100 Nov 24 08:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:24:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 08:10 run_atlas
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas       105 Nov 24 08:10 job.xml
[2025-11-25 00:24:36] -rw-r--r--. 2 boincer umatlas 410521241 Nov 24 08:10 EVNT.47483658._000439.pool.root.1
[2025-11-25 00:24:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 08:10 start_atlas.sh
[2025-11-25 00:24:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 08:10 shared
[2025-11-25 00:24:36] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 08:10 input.tar.gz
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas         0 Nov 24 08:10 boinc_lockfile
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas      2785 Nov 24 08:10 pandaJob.out
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas        57 Nov 24 08:10 setup.sh.local
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas    988279 Nov 24 08:11 agis_schedconf.cvmfs.json
[2025-11-25 00:24:36] drwx------. 5 boincer umatlas      4096 Nov 24 08:11 pilot3
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas       533 Nov 24 23:50 boinc_task_state.xml
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas 920215974 Nov 25 00:20 HITS.47556137._004344.pool.root.1
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas      1059 Nov 25 00:22 memory_monitor_summary.json
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas      6879 Nov 25 00:22 init_data.xml
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas   1516227 Nov 25 00:23 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas   2093553 Nov 25 00:23 log.47556137._004344.job.log.tgz.1
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas        95 Nov 25 00:23 pilot_heartbeat.json
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas      8623 Nov 25 00:23 heartbeat.json
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas       823 Nov 25 00:24 pilotlog.txt
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 25 00:24 boinc_mmap_file
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas        29 Nov 25 00:24 wrapper_checkpoint.txt
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas   7156828 Nov 25 00:24 log.47556137._004344.job.log.1
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas       353 Nov 25 00:24 output.list
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas       620 Nov 25 00:24 runtime_log
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas   9267200 Nov 25 00:24 result.tar.gz
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas      9348 Nov 25 00:24 runtime_log.err
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas       661 Nov 25 00:24 oeDNDmI55g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1HKKDmzOEkKn.diag
[2025-11-25 00:24:36] -rw-r--r--. 1 boincer umatlas     21824 Nov 25 00:24 stderr.txt
[2025-11-25 00:24:36] HITS file was successfully produced:
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas 920215974 Nov 25 00:20 shared/HITS.pool.root.1
[2025-11-25 00:24:36]  *** Contents of shared directory: ***
[2025-11-25 00:24:36] total 1309208
[2025-11-25 00:24:36] -rw-r--r--. 2 boincer umatlas 410521241 Nov 24 08:10 ATLAS.root_0
[2025-11-25 00:24:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 08:10 start_atlas.sh
[2025-11-25 00:24:36] -rw-r--r--. 2 boincer umatlas    590099 Nov 24 08:10 input.tar.gz
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas 920215974 Nov 25 00:20 HITS.pool.root.1
[2025-11-25 00:24:36] -rw-------. 1 boincer umatlas   9267200 Nov 25 00:24 result.tar.gz
00:24:38 (2634835): run_atlas exited; CPU time 260465.150850
00:24:38 (2634835): called boinc_finish(0)

</stderr_txt>
]]>

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