Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:54:49 (708164): wrapper (7.7.26015): starting
22:54:49 (708164): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 22:54:49] Arguments: --nthreads 8
[2025-11-24 22:54:49] Threads: 8
[2025-11-24 22:54:49] Checking for CVMFS
[2025-11-24 22:54:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 22:54:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 22:54:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 22:54:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 22:54:51] 2.13.2.0 8790 33885 272664 153268 1 635 29265518 40960000 10204 16776704 0 31803221 99.671 24529053 36609 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 22:54:51] CVMFS is ok
[2025-11-24 22:54:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:54:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:54:51] Further information can be found at the LHC@home message board.
[2025-11-24 22:54:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:54:51] Checking for apptainer binary...
[2025-11-24 22:54:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 22:54:51] Running /usr/bin/apptainer --version
[2025-11-24 22:54:51] apptainer version 1.4.4-1.el9
[2025-11-24 22:54:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:54:51] c-210-33-1.aglt2.org
[2025-11-24 22:54:51] apptainer works
[2025-11-24 22:54:51] Set ATHENA_PROC_NUMBER=8
[2025-11-24 22:54:51] Set ATHENA_CORE_NUMBER=8
[2025-11-24 22:54:51] Starting ATLAS job with PandaID=6895351510
[2025-11-24 22:54:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 08:29:21]  *** The last 200 lines of the pilot log: ***
[2025-11-26 08:29:21] 2025-11-26 13:28:35,659 | INFO     | time since job start (120775s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:37,663 | INFO     | monitor loop #7625: job 0:6895351510 is in state 'finished'
[2025-11-26 08:29:21] 2025-11-26 13:28:37,663 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:29:21] 2025-11-26 13:28:37,666 | INFO     | time since job start (120777s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:39,683 | INFO     | time since job start (120779s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:40,168 | INFO     | monitor loop #7626: job 0:6895351510 is in state 'finished'
[2025-11-26 08:29:21] 2025-11-26 13:28:40,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:29:21] 2025-11-26 13:28:41,690 | INFO     | time since job start (120781s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:42,673 | INFO     | monitor loop #7627: job 0:6895351510 is in state 'finished'
[2025-11-26 08:29:21] 2025-11-26 13:28:42,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:29:21] 2025-11-26 13:28:43,702 | INFO     | time since job start (120783s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:45,178 | INFO     | monitor loop #7628: job 0:6895351510 is in state 'finished'
[2025-11-26 08:29:21] 2025-11-26 13:28:45,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:29:21] 2025-11-26 13:28:45,709 | INFO     | time since job start (120785s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:47,683 | INFO     | monitor loop #7629: job 0:6895351510 is in state 'finished'
[2025-11-26 08:29:21] 2025-11-26 13:28:47,683 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 08:29:21] 2025-11-26 13:28:47,716 | INFO     | time since job start (120787s) is within the limit (172800.0s)
[2025-11-26 08:29:21] 2025-11-26 13:28:48,144 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 08:29:21] 2025-11-26 13:28:48,152 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2853.206625000001
[2025-11-26 08:29:21] 2025-11-26 13:28:48,161 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895351510/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 08:29:21] 2025-11-26 13:28:48,162 | INFO     | extracted standard info from prmon json
[2025-11-26 08:29:21] 2025-11-26 13:28:48,162 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 08:29:21] 2025-11-26 13:28:48,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 08:29:21] 2025-11-26 13:28:48,189 | INFO     | fitting pss+swap vs Time
[2025-11-26 08:29:21] 2025-11-26 13:28:48,192 | INFO     | sum of square deviations: 2399236368293.9487
[2025-11-26 08:29:21] 2025-11-26 13:28:48,253 | INFO     | sum of deviations: 9833589267448.926
[2025-11-26 08:29:21] 2025-11-26 13:28:48,253 | INFO     | mean x: 1764103356.2790697
[2025-11-26 08:29:21] 2025-11-26 13:28:48,253 | INFO     | mean y: 2860663.405965622
[2025-11-26 08:29:21] 2025-11-26 13:28:48,253 | INFO     | intersect: -7227551504.492249
[2025-11-26 08:29:21] 2025-11-26 13:28:48,255 | INFO     | chi2: 24.426477371881667
[2025-11-26 08:29:21] 2025-11-26 13:28:48,257 | INFO     | sum of square deviations: 2381087877029.043
[2025-11-26 08:29:21] 2025-11-26 13:28:48,340 | INFO     | sum of deviations: 10549203269990.467
[2025-11-26 08:29:21] 2025-11-26 13:28:48,340 | INFO     | mean x: 1764103203.7937152
[2025-11-26 08:29:21] 2025-11-26 13:28:48,340 | INFO     | mean y: 2866675.0552458186
[2025-11-26 08:29:21] 2025-11-26 13:28:48,340 | INFO     | intersect: -7812839526.129335
[2025-11-26 08:29:21] 2025-11-26 13:28:48,342 | INFO     | chi2: 20.702686278130695
[2025-11-26 08:29:21] 2025-11-26 13:28:48,342 | INFO     | current chi2=20.702686278130695 (change=15.244896089837262 %)
[2025-11-26 08:29:21] 2025-11-26 13:28:48,342 | INFO     | right removable region: 1972
[2025-11-26 08:29:21] 2025-11-26 13:28:48,345 | INFO     | sum of square deviations: 2381080904119.041
[2025-11-26 08:29:21] 2025-11-26 13:28:48,754 | INFO     | sum of deviations: 9085140077631.775
[2025-11-26 08:29:21] 2025-11-26 13:28:48,755 | INFO     | mean x: 1764103508.7937152
[2025-11-26 08:29:21] 2025-11-26 13:28:48,755 | INFO     | mean y: 2866949.933096807
[2025-11-26 08:29:21] 2025-11-26 13:28:48,755 | INFO     | intersect: -6728163256.183475
[2025-11-26 08:29:21] 2025-11-26 13:28:48,763 | INFO     | chi2: 20.6826133807405
[2025-11-26 08:29:21] 2025-11-26 13:28:48,763 | INFO     | current chi2=20.6826133807405 (change=15.327072889564034 %)
[2025-11-26 08:29:21] 2025-11-26 13:28:48,763 | INFO     | left removable region: 10
[2025-11-26 08:29:21] 2025-11-26 13:28:48,766 | INFO     | sum of square deviations: 2341469950427.2334
[2025-11-26 08:29:21] 2025-11-26 13:28:48,949 | INFO     | sum of deviations: 9266918815461.494
[2025-11-26 08:29:21] 2025-11-26 13:28:48,950 | INFO     | mean x: 1764103478.3261979
[2025-11-26 08:29:21] 2025-11-26 13:28:48,950 | INFO     | mean y: 2879539.9164118245
[2025-11-26 08:29:21] 2025-11-26 13:28:48,950 | INFO     | intersect: -6978975475.023767
[2025-11-26 08:29:21] 2025-11-26 13:28:48,954 | INFO     | chi2: 13.665131681092758
[2025-11-26 08:29:21] 2025-11-26 13:28:48,955 | INFO     | current memory leak: 3.96 B/s (using 1962 data points, chi2=13.67)
[2025-11-26 08:29:21] 2025-11-26 13:28:48,957 | INFO     | could have reported an average CPU frequency of 2859 MHz (69 samples)
[2025-11-26 08:29:21] 2025-11-26 13:28:48,957 | INFO     | ..............................
[2025-11-26 08:29:21] 2025-11-26 13:28:48,957 | INFO     | . Timing measurements:
[2025-11-26 08:29:21] 2025-11-26 13:28:48,957 | INFO     | . get job = 0 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,957 | INFO     | . initial setup = 3 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,958 | INFO     | . payload setup = 31 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,958 | INFO     | . stage-in = 0 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,958 | INFO     | . payload execution = 120669 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,958 | INFO     | . stage-out = 8 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,958 | INFO     | . log creation = 2 s
[2025-11-26 08:29:21] 2025-11-26 13:28:48,958 | INFO     | ..............................
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | 
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | job summary report
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | --------------------------------------------------
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | PanDA job id: 6895351510
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | task id: 47556137
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | errors: (none)
[2025-11-26 08:29:21] 2025-11-26 13:28:49,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | pilot state: finished 
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | transexitcode: 0
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | exeerrorcode: 0
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | exeerrordiag: 
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | exitcode: 0
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | exitmsg: OK
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | cpuconsumptiontime: 249028 s
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | nevents: 1000
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | neventsw: 0
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | pid: 727744
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | pgrp: 727744
[2025-11-26 08:29:21] 2025-11-26 13:28:49,087 | INFO     | corecount: 8
[2025-11-26 08:29:21] 2025-11-26 13:28:49,088 | INFO     | event service: False
[2025-11-26 08:29:21] 2025-11-26 13:28:49,088 | INFO     | sizes: {0: 2283482, 1: 2284338, 2: 2284366, 12: 2284366, 23: 2284394, 27: 2284684, 34: 2284840, 120705: 2366406, 120714: 2375405, 120715: 2375461, 120733: 2375707}
[2025-11-26 08:29:21] 2025-11-26 13:28:49,088 | INFO     | --------------------------------------------------
[2025-11-26 08:29:21] 2025-11-26 13:28:49,088 | INFO     | 
[2025-11-26 08:29:21] 2025-11-26 13:28:49,088 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-26 08:29:21] 2025-11-26 13:28:49,292 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,293 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,293 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,293 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,293 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,293 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,294 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,295 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 08:29:21] 2025-11-26 13:28:49,295 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,295 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 08:29:21] 2025-11-26 13:28:49,295 | INFO     | job 6895351510 has completed (purged errors)
[2025-11-26 08:29:21] 2025-11-26 13:28:49,295 | INFO     | overall cleanup function is called
[2025-11-26 08:29:21] 2025-11-26 13:28:50,327 | INFO     | --- collectZombieJob: --- 10, [727744]
[2025-11-26 08:29:21] 2025-11-26 13:28:50,327 | INFO     | zombie collector waiting for pid 727744
[2025-11-26 08:29:21] 2025-11-26 13:28:50,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 08:29:21] 2025-11-26 13:28:50,328 | INFO     | collected zombie processes
[2025-11-26 08:29:21] 2025-11-26 13:28:50,328 | INFO     | will attempt to kill all subprocesses of pid=727744
[2025-11-26 08:29:21] 2025-11-26 13:28:50,947 | INFO     | process IDs to be killed: [727744] (in reverse order)
[2025-11-26 08:29:21] 2025-11-26 13:28:51,208 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 08:29:21] 2025-11-26 13:28:51,211 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 08:29:21] 2025-11-26 13:28:51,232 | INFO     | did not find any defunct processes belonging to 727744
[2025-11-26 08:29:21] 2025-11-26 13:28:51,309 | INFO     | did not find any defunct processes belonging to 727744
[2025-11-26 08:29:21] 2025-11-26 13:28:51,375 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 08:29:21] 2025-11-26 13:28:51,376 | INFO     | ready for new job
[2025-11-26 08:29:21] 2025-11-26 13:28:51,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 08:29:21] 2025-11-26 13:28:51,404 | INFO     | ***************************************
[2025-11-26 08:29:21] 2025-11-26 13:28:51,404 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 08:29:21] 2025-11-26 13:28:51,405 | INFO     | ***************************************
[2025-11-26 08:29:21] 2025-11-26 13:28:51,405 | INFO     | 
[2025-11-26 08:29:21] 2025-11-26 13:28:51,408 | INFO     | architecture information:
[2025-11-26 08:29:21] 2025-11-26 13:28:51,423 | INFO     | executing command: cat /etc/os-release
[2025-11-26 08:29:21] 2025-11-26 13:28:51,512 | INFO     | cat /etc/os-release:
[2025-11-26 08:29:21] NAME="CentOS Linux"
[2025-11-26 08:29:21] VERSION="7 (Core)"
[2025-11-26 08:29:21] ID="centos"
[2025-11-26 08:29:21] ID_LIKE="rhel fedora"
[2025-11-26 08:29:21] VERSION_ID="7"
[2025-11-26 08:29:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 08:29:21] ANSI_COLOR="0;31"
[2025-11-26 08:29:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 08:29:21] HOME_URL="https://www.centos.org/"
[2025-11-26 08:29:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 08:29:21] 
[2025-11-26 08:29:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 08:29:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 08:29:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 08:29:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 08:29:21] 
[2025-11-26 08:29:21] 2025-11-26 13:28:51,513 | INFO     | ***************************************
[2025-11-26 08:29:21] 2025-11-26 13:28:52,016 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-26 08:29:21] 2025-11-26 13:28:52,068 | INFO     | sufficient remaining disk space (68196237312 B)
[2025-11-26 08:29:21] 2025-11-26 13:28:52,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 08:29:21] 2025-11-26 13:28:52,068 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 08:29:21] 2025-11-26 13:28:52,069 | INFO     | update_server=False
[2025-11-26 08:29:21] 2025-11-26 13:28:52,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 08:29:21] 2025-11-26 13:28:52,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:29:21] 2025-11-26 13:28:52,069 | INFO     | aborting loop
[2025-11-26 08:29:21] 2025-11-26 13:28:52,121 | INFO     | all data control threads have been joined
[2025-11-26 08:29:21] 2025-11-26 13:28:52,938 | INFO     | all payload control threads have been joined
[2025-11-26 08:29:21] 2025-11-26 13:28:53,074 | INFO     | [job] retrieve thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,075 | INFO     | [job] job monitor thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,127 | INFO     | [data] control thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,200 | INFO     | [payload] failed_post thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,243 | INFO     | all job control threads have been joined
[2025-11-26 08:29:21] 2025-11-26 13:28:53,285 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,346 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 08:29:21] 2025-11-26 13:28:53,346 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,520 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,741 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,888 | INFO     | [job] validate thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:53,944 | INFO     | [payload] control thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:54,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 08:29:21] 2025-11-26 13:28:54,248 | INFO     | [job] control thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:54,325 | INFO     | [payload] validate_post thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:54,326 | INFO     | [data] copytool_in thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:55,112 | INFO     | [job] queue monitor thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:55,137 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 08:29:21] 2025-11-26 13:28:55,353 | INFO     | [data] copytool_out thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:28:59,148 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 08:29:21] 2025-11-26 13:29:14,086 | INFO     | [monitor] cgroup control has ended
[2025-11-26 08:29:21] 2025-11-26 13:29:15,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877088102208)>', '<ExcThread(monitor, started 139876573882112)>']
[2025-11-26 08:29:21] 2025-11-26 13:29:20,608 | INFO     | all workflow threads have been joined
[2025-11-26 08:29:21] 2025-11-26 13:29:20,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 08:29:21] 2025-11-26 13:29:20,609 | INFO     | traces error code: 0
[2025-11-26 08:29:21] 2025-11-26 13:29:20,609 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 08:29:21] 2025-11-26 13:29:21,335 | INFO     | PID=713395 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-26 08:29:21] 2025-11-26 13:29:21,336 | INFO     | .. there are 13 such processes running
[2025-11-26 08:29:21] 2025-11-26 13:29:21,337 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 08:29:21] 2025-11-26 13:29:21,337 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 08:29:21] 2025-11-26 13:29:21,337 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 08:29:21] 2025-11-26 13:29:21,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 08:29:21] 2025-11-26 13:29:21,337 | INFO     | [monitor] control thread has ended
[2025-11-26 08:29:21] 2025-11-26 13:29:21,580 [wrapper] ==== pilot stdout END ====
[2025-11-26 08:29:21] 2025-11-26 13:29:21,584 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 08:29:21] 2025-11-26 13:29:21,587 [wrapper] pilotpid: 713395
[2025-11-26 08:29:21] 2025-11-26 13:29:21,590 [wrapper] Pilot exit status: 0
[2025-11-26 08:29:21] 2025-11-26 13:29:21,616 [wrapper] pandaids: 6895351510
[2025-11-26 08:29:21] 2025-11-26 13:29:21,679 [wrapper] cleanup supervisor_pilot 3795165 713396
[2025-11-26 08:29:21] 2025-11-26 13:29:21,682 [wrapper] Test setup, not cleaning
[2025-11-26 08:29:21] 2025-11-26 13:29:21,685 [wrapper] apfmon messages muted
[2025-11-26 08:29:21] 2025-11-26 13:29:21,688 [wrapper] ==== wrapper stdout END ====
[2025-11-26 08:29:21] 2025-11-26 13:29:21,691 [wrapper] ==== wrapper stderr END ====
[2025-11-26 08:29:21]  *** Error codes and diagnostics ***
[2025-11-26 08:29:21]     "exeErrorCode": 0,
[2025-11-26 08:29:21]     "exeErrorDiag": "",
[2025-11-26 08:29:21]     "pilotErrorCode": 0,
[2025-11-26 08:29:21]     "pilotErrorDiag": "",
[2025-11-26 08:29:21]  *** Listing of results directory ***
[2025-11-26 08:29:21] total 1340200
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 22 19:28 pilot3.tar.gz
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 22 19:48 queuedata.json
[2025-11-26 08:29:21] -rwx------. 1 boincer umatlas     36292 Nov 22 19:50 runpilot2-wrapper.sh
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas       100 Nov 24 22:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 08:29:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 22:54 run_atlas
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas       105 Nov 24 22:54 job.xml
[2025-11-26 08:29:21] -rw-r--r--. 2 boincer umatlas 410310148 Nov 24 22:54 EVNT.47483658._000554.pool.root.1
[2025-11-26 08:29:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:54 start_atlas.sh
[2025-11-26 08:29:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 22:54 shared
[2025-11-26 08:29:21] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 22:54 input.tar.gz
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas         0 Nov 24 22:54 boinc_lockfile
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas      2786 Nov 24 22:54 pandaJob.out
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas        57 Nov 24 22:54 setup.sh.local
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas    991801 Nov 24 22:55 agis_schedconf.cvmfs.json
[2025-11-26 08:29:21] drwx------. 5 boincer umatlas      4096 Nov 24 22:55 pilot3
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas       533 Nov 26 07:58 boinc_task_state.xml
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas 920712139 Nov 26 08:25 HITS.47556137._005497.pool.root.1
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas      6843 Nov 26 08:27 init_data.xml
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas      1060 Nov 26 08:28 memory_monitor_summary.json
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas   1516240 Nov 26 08:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas   2921268 Nov 26 08:28 log.47556137._005497.job.log.tgz.1
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas      8626 Nov 26 08:28 heartbeat.json
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas        29 Nov 26 08:29 wrapper_checkpoint.txt
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas        95 Nov 26 08:29 pilot_heartbeat.json
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas       822 Nov 26 08:29 pilotlog.txt
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 08:29 boinc_mmap_file
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas  15786549 Nov 26 08:29 log.47556137._005497.job.log.1
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas       353 Nov 26 08:29 output.list
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas       620 Nov 26 08:29 runtime_log
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas  18728960 Nov 26 08:29 result.tar.gz
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas      9354 Nov 26 08:29 runtime_log.err
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas       665 Nov 26 08:29 1gKNDmFUDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIUKKDm916fHo.diag
[2025-11-26 08:29:21] -rw-r--r--. 1 boincer umatlas     21813 Nov 26 08:29 stderr.txt
[2025-11-26 08:29:21] HITS file was successfully produced:
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas 920712139 Nov 26 08:25 shared/HITS.pool.root.1
[2025-11-26 08:29:21]  *** Contents of shared directory: ***
[2025-11-26 08:29:21] total 1318728
[2025-11-26 08:29:21] -rw-r--r--. 2 boincer umatlas 410310148 Nov 24 22:54 ATLAS.root_0
[2025-11-26 08:29:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 22:54 start_atlas.sh
[2025-11-26 08:29:21] -rw-r--r--. 2 boincer umatlas    590105 Nov 24 22:54 input.tar.gz
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas 920712139 Nov 26 08:25 HITS.pool.root.1
[2025-11-26 08:29:21] -rw-------. 1 boincer umatlas  18728960 Nov 26 08:29 result.tar.gz
08:29:43 (708164): run_atlas exited; CPU time 250647.989178
08:29:43 (708164): called boinc_finish(0)

</stderr_txt>
]]>

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