Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:18:00 (2529): wrapper (7.7.26015): starting
09:18:00 (2529): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 09:18:00] Arguments: --nthreads 8
[2025-11-26 09:18:00] Threads: 8
[2025-11-26 09:18:00] Checking for CVMFS
[2025-11-26 09:18:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:18:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:18:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:18:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:18:03] 2.11.2.0 19767 80515 91128 153315 1 20 20618462 25165824 1288 130560 12 24183811 99.855 17434688 2141 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 09:18:03] CVMFS is ok
[2025-11-26 09:18:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:18:03] Checking for apptainer binary...
[2025-11-26 09:18:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:18:03] Running /usr/bin/apptainer --version
[2025-11-26 09:18:03] apptainer version 1.3.2-1.el7
[2025-11-26 09:18:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:18:18] cg-vwn305.simple-grid.lan
[2025-11-26 09:18:18] apptainer works
[2025-11-26 09:18:18] Set ATHENA_PROC_NUMBER=8
[2025-11-26 09:18:18] Set ATHENA_CORE_NUMBER=8
[2025-11-26 09:18:18] Starting ATLAS job with PandaID=6893886112
[2025-11-26 09:18:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:38:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:38:47] 2025-11-27 07:37:57,102 | INFO     | monitor loop #5629: job 0:6893886112 is in state 'finished'
[2025-11-27 08:38:47] 2025-11-27 07:37:57,103 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:38:47] 2025-11-27 07:37:57,625 | INFO     | time since job start (83746s) is within the limit (172800.0s)
[2025-11-27 08:38:47] 2025-11-27 07:37:59,607 | INFO     | monitor loop #5630: job 0:6893886112 is in state 'finished'
[2025-11-27 08:38:47] 2025-11-27 07:37:59,608 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:38:47] 2025-11-27 07:37:59,634 | INFO     | time since job start (83748s) is within the limit (172800.0s)
[2025-11-27 08:38:47] 2025-11-27 07:38:01,648 | INFO     | time since job start (83750s) is within the limit (172800.0s)
[2025-11-27 08:38:47] 2025-11-27 07:38:02,118 | INFO     | monitor loop #5631: job 0:6893886112 is in state 'finished'
[2025-11-27 08:38:47] 2025-11-27 07:38:02,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:38:47] 2025-11-27 07:38:03,665 | INFO     | time since job start (83752s) is within the limit (172800.0s)
[2025-11-27 08:38:47] 2025-11-27 07:38:04,626 | INFO     | monitor loop #5632: job 0:6893886112 is in state 'finished'
[2025-11-27 08:38:47] 2025-11-27 07:38:04,627 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:38:47] 2025-11-27 07:38:05,672 | INFO     | time since job start (83754s) is within the limit (172800.0s)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,208 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 08:38:47] 2025-11-27 07:38:06,210 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-11-27 08:38:47] 2025-11-27 07:38:06,213 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893886112/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,213 | INFO     | extracted standard info from prmon json
[2025-11-27 08:38:47] 2025-11-27 07:38:06,213 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:38:47] 2025-11-27 07:38:06,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:38:47] 2025-11-27 07:38:06,239 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:38:47] 2025-11-27 07:38:06,242 | INFO     | sum of square deviations: 786901894360.2501
[2025-11-27 08:38:47] 2025-11-27 07:38:06,310 | INFO     | sum of deviations: 3188390763563.4517
[2025-11-27 08:38:47] 2025-11-27 07:38:06,310 | INFO     | mean x: 1764187396.5703812
[2025-11-27 08:38:47] 2025-11-27 07:38:06,310 | INFO     | mean y: 2830403.7243401757
[2025-11-27 08:38:47] 2025-11-27 07:38:06,310 | INFO     | intersect: -7145352668.05884
[2025-11-27 08:38:47] 2025-11-27 07:38:06,317 | INFO     | chi2: 24.03061238624878
[2025-11-27 08:38:47] 2025-11-27 07:38:06,319 | INFO     | sum of square deviations: 778280391949.4935
[2025-11-27 08:38:47] 2025-11-27 07:38:06,374 | INFO     | sum of deviations: 3639811029168.671
[2025-11-27 08:38:47] 2025-11-27 07:38:06,374 | INFO     | mean x: 1764187244.0743194
[2025-11-27 08:38:47] 2025-11-27 07:38:06,374 | INFO     | mean y: 2838386.9933774834
[2025-11-27 08:38:47] 2025-11-27 07:38:06,375 | INFO     | intersect: -8247797572.645575
[2025-11-27 08:38:47] 2025-11-27 07:38:06,376 | INFO     | chi2: 20.787694306071508
[2025-11-27 08:38:47] 2025-11-27 07:38:06,377 | INFO     | current chi2=20.787694306071508 (change=13.494945647048894 %)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,377 | INFO     | right removable region: 1358
[2025-11-27 08:38:47] 2025-11-27 07:38:06,379 | INFO     | sum of square deviations: 778279501349.4933
[2025-11-27 08:38:47] 2025-11-27 07:38:06,449 | INFO     | sum of deviations: 2621800485197.759
[2025-11-27 08:38:47] 2025-11-27 07:38:06,449 | INFO     | mean x: 1764187549.0743194
[2025-11-27 08:38:47] 2025-11-27 07:38:06,449 | INFO     | mean y: 2840424.1905813096
[2025-11-27 08:38:47] 2025-11-27 07:38:06,449 | INFO     | intersect: -5940201585.9391985
[2025-11-27 08:38:47] 2025-11-27 07:38:06,451 | INFO     | chi2: 19.362568270249703
[2025-11-27 08:38:47] 2025-11-27 07:38:06,451 | INFO     | current chi2=19.362568270249703 (change=19.4254063981753 %)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,451 | INFO     | left removable region: 10
[2025-11-27 08:38:47] 2025-11-27 07:38:06,453 | INFO     | sum of square deviations: 759533478913.6958
[2025-11-27 08:38:47] 2025-11-27 07:38:06,519 | INFO     | sum of deviations: 2695012001231.7715
[2025-11-27 08:38:47] 2025-11-27 07:38:06,520 | INFO     | mean x: 1764187518.583086
[2025-11-27 08:38:47] 2025-11-27 07:38:06,520 | INFO     | mean y: 2858837.3145400593
[2025-11-27 08:38:47] 2025-11-27 07:38:06,520 | INFO     | intersect: -6256913334.683372
[2025-11-27 08:38:47] 2025-11-27 07:38:06,522 | INFO     | chi2: 12.084063843316628
[2025-11-27 08:38:47] 2025-11-27 07:38:06,522 | INFO     | current memory leak: 3.55 B/s (using 1348 data points, chi2=12.08)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,523 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,523 | INFO     | ..............................
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . Timing measurements:
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . get job = 0 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . initial setup = 5 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . payload setup = 139 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . stage-in = 0 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . payload execution = 83319 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . stage-out = 5 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | . log creation = 2 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,524 | INFO     | ..............................
[2025-11-27 08:38:47] 2025-11-27 07:38:06,668 | INFO     | 
[2025-11-27 08:38:47] 2025-11-27 07:38:06,668 | INFO     | job summary report
[2025-11-27 08:38:47] 2025-11-27 07:38:06,668 | INFO     | --------------------------------------------------
[2025-11-27 08:38:47] 2025-11-27 07:38:06,668 | INFO     | PanDA job id: 6893886112
[2025-11-27 08:38:47] 2025-11-27 07:38:06,668 | INFO     | task id: 47523449
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | errors: (none)
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | pilot state: finished 
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | transexitcode: 0
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | exeerrorcode: 0
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | exeerrordiag: 
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | exitcode: 0
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | exitmsg: OK
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | cpuconsumptiontime: 313894 s
[2025-11-27 08:38:47] 2025-11-27 07:38:06,669 | INFO     | nevents: 1000
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | neventsw: 0
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | pid: 12922
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | pgrp: 12922
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | corecount: 8
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | event service: False
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 22: 2284370, 33: 2284398, 44: 2284454, 55: 2284610, 65: 2284638, 76: 2284666, 87: 2284722, 93: 2285012, 98: 2285320, 8
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | --------------------------------------------------
[2025-11-27 08:38:47] 2025-11-27 07:38:06,670 | INFO     | 
[2025-11-27 08:38:47] 2025-11-27 07:38:06,671 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-27 08:38:47] 2025-11-27 07:38:07,079 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,080 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,080 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,080 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,080 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,080 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,080 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,081 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | job 6893886112 has completed (purged errors)
[2025-11-27 08:38:47] 2025-11-27 07:38:07,082 | INFO     | overall cleanup function is called
[2025-11-27 08:38:47] 2025-11-27 07:38:08,099 | INFO     | --- collectZombieJob: --- 10, [12922]
[2025-11-27 08:38:47] 2025-11-27 07:38:08,100 | INFO     | zombie collector waiting for pid 12922
[2025-11-27 08:38:47] 2025-11-27 07:38:08,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:38:47] 2025-11-27 07:38:08,100 | INFO     | collected zombie processes
[2025-11-27 08:38:47] 2025-11-27 07:38:08,100 | INFO     | will attempt to kill all subprocesses of pid=12922
[2025-11-27 08:38:47] 2025-11-27 07:38:08,206 | INFO     | process IDs to be killed: [12922] (in reverse order)
[2025-11-27 08:38:47] 2025-11-27 07:38:08,223 [wrapper] supervise_pilot (15 min periods counter: 94)
[2025-11-27 08:38:47] 2025-11-27 07:38:08,276 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:38:47] 2025-11-27 07:38:08,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:38:47] 2025-11-27 07:38:08,280 | INFO     | did not find any defunct processes belonging to 12922
[2025-11-27 08:38:47] 2025-11-27 07:38:08,282 | INFO     | did not find any defunct processes belonging to 12922
[2025-11-27 08:38:47] 2025-11-27 07:38:08,289 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:38:47] 2025-11-27 07:38:08,289 | INFO     | ready for new job
[2025-11-27 08:38:47] 2025-11-27 07:38:08,289 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:38:47] 2025-11-27 07:38:08,294 | INFO     | ***************************************
[2025-11-27 08:38:47] 2025-11-27 07:38:08,294 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:38:47] 2025-11-27 07:38:08,294 | INFO     | ***************************************
[2025-11-27 08:38:47] 2025-11-27 07:38:08,295 | INFO     | 
[2025-11-27 08:38:47] 2025-11-27 07:38:08,295 | INFO     | pilot is running in a VM
[2025-11-27 08:38:47] 2025-11-27 07:38:08,295 | INFO     | architecture information:
[2025-11-27 08:38:47] 2025-11-27 07:38:08,304 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:38:47] 2025-11-27 07:38:08,568 | INFO     | cat /etc/os-release:
[2025-11-27 08:38:47] NAME="CentOS Linux"
[2025-11-27 08:38:47] VERSION="7 (Core)"
[2025-11-27 08:38:47] ID="centos"
[2025-11-27 08:38:47] ID_LIKE="rhel fedora"
[2025-11-27 08:38:47] VERSION_ID="7"
[2025-11-27 08:38:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:38:47] ANSI_COLOR="0;31"
[2025-11-27 08:38:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:38:47] HOME_URL="https://www.centos.org/"
[2025-11-27 08:38:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:38:47] 
[2025-11-27 08:38:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:38:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:38:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:38:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:38:47] 
[2025-11-27 08:38:47] 2025-11-27 07:38:08,568 | INFO     | ***************************************
[2025-11-27 08:38:47] 2025-11-27 07:38:09,072 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-27 08:38:47] 2025-11-27 07:38:09,248 | INFO     | sufficient remaining disk space (495730032640 B)
[2025-11-27 08:38:47] 2025-11-27 07:38:09,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:38:47] 2025-11-27 07:38:09,249 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:38:47] 2025-11-27 07:38:09,249 | INFO     | update_server=False
[2025-11-27 08:38:47] 2025-11-27 07:38:09,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:38:47] 2025-11-27 07:38:09,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:38:47] 2025-11-27 07:38:09,641 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:38:47] 2025-11-27 07:38:09,642 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:38:47] 2025-11-27 07:38:09,642 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:38:47] 2025-11-27 07:38:09,642 | INFO     | will abort loop
[2025-11-27 08:38:47] 2025-11-27 07:38:09,825 | INFO     | all data control threads have been joined
[2025-11-27 08:38:47] 2025-11-27 07:38:10,016 | INFO     | all job control threads have been joined
[2025-11-27 08:38:47] 2025-11-27 07:38:10,255 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,301 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,315 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:38:47] 2025-11-27 07:38:10,374 | INFO     | all payload control threads have been joined
[2025-11-27 08:38:47] 2025-11-27 07:38:10,437 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,568 | INFO     | [job] validate thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,648 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,784 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:10,832 | INFO     | [data] control thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,023 | INFO     | [job] control thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,255 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,267 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,281 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,381 | INFO     | [payload] control thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,449 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:11,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:38:47] 2025-11-27 07:38:12,689 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:14,349 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:38:47] 2025-11-27 07:38:37,605 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:38:47] 2025-11-27 07:38:38,831 | INFO     | PID=6364 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 08:38:47] 2025-11-27 07:38:38,831 | INFO     | .. there are 9 such processes running
[2025-11-27 08:38:47] 2025-11-27 07:38:38,831 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:38:47] 2025-11-27 07:38:38,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:38:47] 2025-11-27 07:38:38,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:38:47] 2025-11-27 07:38:39,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140168436176704)>', '<ExcThread(monitor, started 140167859922688)>']
[2025-11-27 08:38:47] 2025-11-27 07:38:39,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:38:47] 2025-11-27 07:38:39,838 | INFO     | [monitor] control thread has ended
[2025-11-27 08:38:47] 2025-11-27 07:38:44,414 | INFO     | all workflow threads have been joined
[2025-11-27 08:38:47] 2025-11-27 07:38:44,415 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:38:47] 2025-11-27 07:38:44,415 | INFO     | traces error code: 0
[2025-11-27 08:38:47] 2025-11-27 07:38:44,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:38:47] 2025-11-27 07:38:44,754 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:38:47] 2025-11-27 07:38:44,808 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:38:47] 2025-11-27 07:38:44,861 [wrapper] pilotpid: 6364
[2025-11-27 08:38:47] 2025-11-27 07:38:44,948 [wrapper] Pilot exit status: 0
[2025-11-27 08:38:47] 2025-11-27 07:38:45,181 [wrapper] pandaids: 6893886112
[2025-11-27 08:38:47] 2025-11-27 07:38:45,607 [wrapper] cleanup supervisor_pilot 18280 6365
[2025-11-27 08:38:47] 2025-11-27 07:38:45,624 [wrapper] Test setup, not cleaning
[2025-11-27 08:38:47] 2025-11-27 07:38:45,695 [wrapper] apfmon messages muted
[2025-11-27 08:38:47] 2025-11-27 07:38:45,816 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:38:47] 2025-11-27 07:38:45,882 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:38:47]  *** Error codes and diagnostics ***
[2025-11-27 08:38:47]     "exeErrorCode": 0,
[2025-11-27 08:38:47]     "exeErrorDiag": "",
[2025-11-27 08:38:47]     "pilotErrorCode": 0,
[2025-11-27 08:38:47]     "pilotErrorDiag": "",
[2025-11-27 08:38:47]  *** Listing of results directory ***
[2025-11-27 08:38:47] total 1328168
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc    576529 Nov 20 23:26 pilot3.tar.gz
[2025-11-27 08:38:47] -rwx------. 1 boinc boinc     36292 Nov 20 23:29 runpilot2-wrapper.sh
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc      5112 Nov 20 23:29 queuedata.json
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc       100 Nov 26 09:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:38:47] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 09:18 run_atlas
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc       105 Nov 26 09:18 job.xml
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc      6392 Nov 26 09:18 init_data.xml
[2025-11-27 08:38:47] -rw-r--r--. 2 boinc boinc 408947755 Nov 26 09:18 EVNT.47493127._000951.pool.root.1
[2025-11-27 08:38:47] -rw-r--r--. 2 boinc boinc     15847 Nov 26 09:18 start_atlas.sh
[2025-11-27 08:38:47] drwxrwx--x. 2 boinc boinc        68 Nov 26 09:18 shared
[2025-11-27 08:38:47] -rw-r--r--. 2 boinc boinc    590100 Nov 26 09:18 input.tar.gz
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc         0 Nov 26 09:18 boinc_lockfile
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc      2785 Nov 26 09:18 pandaJob.out
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc    991877 Nov 26 09:22 agis_schedconf.cvmfs.json
[2025-11-27 08:38:47] drwx------. 5 boinc boinc      4096 Nov 26 09:22 pilot3
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc       533 Nov 27 08:12 boinc_task_state.xml
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc 919961066 Nov 27 08:34 HITS.47523449._009507.pool.root.1
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc      1028 Nov 27 08:36 memory_monitor_summary.json
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc   1516240 Nov 27 08:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc   2456841 Nov 27 08:36 log.47523449._009507.job.log.tgz.1
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc        95 Nov 27 08:38 pilot_heartbeat.json
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc      8627 Nov 27 08:38 heartbeat.json
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc      8192 Nov 27 08:38 boinc_mmap_file
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc        29 Nov 27 08:38 wrapper_checkpoint.txt
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc      5069 Nov 27 08:38 pilotlog.txt
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc  11160889 Nov 27 08:38 log.47523449._009507.job.log.1
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc       353 Nov 27 08:38 output.list
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc       620 Nov 27 08:38 runtime_log
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc  13639680 Nov 27 08:38 result.tar.gz
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc       662 Nov 27 08:38 SLyMDmwKSg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIdIKDm6inAWm.diag
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc      8817 Nov 27 08:38 runtime_log.err
[2025-11-27 08:38:47] -rw-r--r--. 1 boinc boinc     21399 Nov 27 08:38 stderr.txt
[2025-11-27 08:38:47] HITS file was successfully produced:
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc 919961066 Nov 27 08:34 shared/HITS.pool.root.1
[2025-11-27 08:38:47]  *** Contents of shared directory: ***
[2025-11-27 08:38:47] total 1311680
[2025-11-27 08:38:47] -rw-r--r--. 2 boinc boinc 408947755 Nov 26 09:18 ATLAS.root_0
[2025-11-27 08:38:47] -rw-r--r--. 2 boinc boinc     15847 Nov 26 09:18 start_atlas.sh
[2025-11-27 08:38:47] -rw-r--r--. 2 boinc boinc    590100 Nov 26 09:18 input.tar.gz
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc 919961066 Nov 27 08:34 HITS.pool.root.1
[2025-11-27 08:38:47] -rw-------. 1 boinc boinc  13639680 Nov 27 08:38 result.tar.gz
08:38:48 (2529): run_atlas exited; CPU time 314504.533199
08:38:48 (2529): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN