Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:45:32 (26828): wrapper (7.7.26015): starting
00:45:32 (26828): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:45:32] Arguments: --nthreads 8
[2025-11-27 00:45:32] Threads: 8
[2025-11-27 00:45:32] Checking for CVMFS
[2025-11-27 00:45:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:45:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:45:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:45:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:45:35] 2.11.2.0 31060 223144 141396 153340 2 85 22532041 25165824 1288 130560 11 115938782 99.901 46177558 2642 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 00:45:35] CVMFS is ok
[2025-11-27 00:45:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:45:35] Checking for apptainer binary...
[2025-11-27 00:45:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:45:35] Running /usr/bin/apptainer --version
[2025-11-27 00:45:35] apptainer version 1.3.2-1.el7
[2025-11-27 00:45:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:46:00] cg-vwn357.simple-grid.lan
[2025-11-27 00:46:00] apptainer works
[2025-11-27 00:46:00] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:46:00] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:46:00] Starting ATLAS job with PandaID=6894238034
[2025-11-27 00:46:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:30:49]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:30:49] 2025-11-27 23:30:02,805 | INFO     | monitor loop #5733: job 0:6894238034 is in state 'finished'
[2025-11-28 00:30:49] 2025-11-27 23:30:02,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:30:49] 2025-11-27 23:30:03,665 | INFO     | time since job start (85202s) is within the limit (172800.0s)
[2025-11-28 00:30:49] 2025-11-27 23:30:05,315 | INFO     | monitor loop #5734: job 0:6894238034 is in state 'finished'
[2025-11-28 00:30:49] 2025-11-27 23:30:05,316 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:30:49] 2025-11-27 23:30:05,672 | INFO     | time since job start (85204s) is within the limit (172800.0s)
[2025-11-28 00:30:49] 2025-11-27 23:30:07,679 | INFO     | time since job start (85206s) is within the limit (172800.0s)
[2025-11-28 00:30:49] 2025-11-27 23:30:07,824 | INFO     | monitor loop #5735: job 0:6894238034 is in state 'finished'
[2025-11-28 00:30:49] 2025-11-27 23:30:07,825 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:30:49] 2025-11-27 23:30:09,686 | INFO     | time since job start (85208s) is within the limit (172800.0s)
[2025-11-28 00:30:49] 2025-11-27 23:30:10,329 | INFO     | monitor loop #5736: job 0:6894238034 is in state 'finished'
[2025-11-28 00:30:49] 2025-11-27 23:30:10,330 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:30:49] 2025-11-27 23:30:11,693 | INFO     | time since job start (85210s) is within the limit (172800.0s)
[2025-11-28 00:30:49] 2025-11-27 23:30:12,843 | INFO     | monitor loop #5737: job 0:6894238034 is in state 'finished'
[2025-11-28 00:30:49] 2025-11-27 23:30:12,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:30:49] 2025-11-27 23:30:13,700 | INFO     | time since job start (85212s) is within the limit (172800.0s)
[2025-11-28 00:30:49] 2025-11-27 23:30:14,552 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 00:30:49] 2025-11-27 23:30:14,553 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 00:30:49] 2025-11-27 23:30:14,554 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6894238034/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:30:49] 2025-11-27 23:30:14,555 | INFO     | extracted standard info from prmon json
[2025-11-28 00:30:49] 2025-11-27 23:30:14,555 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:30:49] 2025-11-27 23:30:14,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:30:49] 2025-11-27 23:30:14,580 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:30:49] 2025-11-27 23:30:14,582 | INFO     | sum of square deviations: 827384245164.5535
[2025-11-28 00:30:49] 2025-11-27 23:30:14,722 | INFO     | sum of deviations: 3029940239143.264
[2025-11-28 00:30:49] 2025-11-27 23:30:14,722 | INFO     | mean x: 1764243787.0908434
[2025-11-28 00:30:49] 2025-11-27 23:30:14,722 | INFO     | mean y: 2848465.8788752705
[2025-11-28 00:30:49] 2025-11-27 23:30:14,722 | INFO     | intersect: -6457938373.374878
[2025-11-28 00:30:49] 2025-11-27 23:30:14,724 | INFO     | chi2: 22.325797612579038
[2025-11-28 00:30:49] 2025-11-27 23:30:14,726 | INFO     | sum of square deviations: 818468995271.0828
[2025-11-28 00:30:49] 2025-11-27 23:30:14,850 | INFO     | sum of deviations: 3497602867958.714
[2025-11-28 00:30:49] 2025-11-27 23:30:14,851 | INFO     | mean x: 1764243634.5947902
[2025-11-28 00:30:49] 2025-11-27 23:30:14,851 | INFO     | mean y: 2856464.7655571634
[2025-11-28 00:30:49] 2025-11-27 23:30:14,851 | INFO     | intersect: -7536370594.278859
[2025-11-28 00:30:49] 2025-11-27 23:30:14,852 | INFO     | chi2: 18.99255362743341
[2025-11-28 00:30:49] 2025-11-27 23:30:14,853 | INFO     | current chi2=18.99255362743341 (change=14.930010757006848 %)
[2025-11-28 00:30:49] 2025-11-27 23:30:14,853 | INFO     | right removable region: 1381
[2025-11-28 00:30:49] 2025-11-27 23:30:14,855 | INFO     | sum of square deviations: 818468072341.0823
[2025-11-28 00:30:49] 2025-11-27 23:30:14,910 | INFO     | sum of deviations: 2459321560155.127
[2025-11-28 00:30:49] 2025-11-27 23:30:14,911 | INFO     | mean x: 1764243939.5947902
[2025-11-28 00:30:49] 2025-11-27 23:30:14,911 | INFO     | mean y: 2858224.7127351663
[2025-11-28 00:30:49] 2025-11-27 23:30:14,911 | INFO     | intersect: -5298317599.54147
[2025-11-28 00:30:49] 2025-11-27 23:30:14,913 | INFO     | chi2: 17.85340430444256
[2025-11-28 00:30:49] 2025-11-27 23:30:14,913 | INFO     | current chi2=17.85340430444256 (change=20.03240101763081 %)
[2025-11-28 00:30:49] 2025-11-27 23:30:14,913 | INFO     | left removable region: 10
[2025-11-28 00:30:49] 2025-11-27 23:30:14,915 | INFO     | sum of square deviations: 799079538765.2927
[2025-11-28 00:30:49] 2025-11-27 23:30:14,970 | INFO     | sum of deviations: 2537286818239.507
[2025-11-28 00:30:49] 2025-11-27 23:30:14,970 | INFO     | mean x: 1764243909.103574
[2025-11-28 00:30:49] 2025-11-27 23:30:14,970 | INFO     | mean y: 2876595.65134938
[2025-11-28 00:30:49] 2025-11-27 23:30:14,970 | INFO     | intersect: -5599059879.464243
[2025-11-28 00:30:49] 2025-11-27 23:30:14,972 | INFO     | chi2: 10.491452103365564
[2025-11-28 00:30:49] 2025-11-27 23:30:14,972 | INFO     | current memory leak: 3.18 B/s (using 1371 data points, chi2=10.49)
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | ..............................
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | . Timing measurements:
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | . get job = 0 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | . initial setup = 7 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | . payload setup = 151 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | . stage-in = 0 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,974 | INFO     | . payload execution = 84764 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,975 | INFO     | . stage-out = 5 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,975 | INFO     | . log creation = 1 s
[2025-11-28 00:30:49] 2025-11-27 23:30:14,975 | INFO     | ..............................
[2025-11-28 00:30:49] 2025-11-27 23:30:15,304 | INFO     | 
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | job summary report
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | --------------------------------------------------
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | PanDA job id: 6894238034
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | task id: 47533967
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | errors: (none)
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | pilot state: finished 
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | transexitcode: 0
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | exeerrorcode: 0
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | exeerrordiag: 
[2025-11-28 00:30:49] 2025-11-27 23:30:15,305 | INFO     | exitcode: 0
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | exitmsg: OK
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | cpuconsumptiontime: 320755 s
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | nevents: 1000
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | neventsw: 0
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | pid: 5076
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | pgrp: 5076
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | corecount: 8
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | event service: False
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | sizes: {0: 2284143, 1: 2284342, 12: 2284342, 22: 2284370, 33: 2284398, 44: 2284454, 55: 2284610, 65: 2284638, 76: 2284666, 87: 2284722, 91: 2285012, 97: 2285320, 8
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | --------------------------------------------------
[2025-11-28 00:30:49] 2025-11-27 23:30:15,306 | INFO     | 
[2025-11-28 00:30:49] 2025-11-27 23:30:15,307 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-28 00:30:49] 2025-11-27 23:30:15,552 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,552 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,552 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,552 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,552 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,552 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,554 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:30:49] 2025-11-27 23:30:15,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:30:49] 2025-11-27 23:30:15,554 | INFO     | job 6894238034 has completed (purged errors)
[2025-11-28 00:30:49] 2025-11-27 23:30:15,554 | INFO     | overall cleanup function is called
[2025-11-28 00:30:49] 2025-11-27 23:30:16,572 | INFO     | --- collectZombieJob: --- 10, [5076]
[2025-11-28 00:30:49] 2025-11-27 23:30:16,573 | INFO     | zombie collector waiting for pid 5076
[2025-11-28 00:30:49] 2025-11-27 23:30:16,573 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:30:49] 2025-11-27 23:30:16,573 | INFO     | collected zombie processes
[2025-11-28 00:30:49] 2025-11-27 23:30:16,573 | INFO     | will attempt to kill all subprocesses of pid=5076
[2025-11-28 00:30:49] 2025-11-27 23:30:16,703 | INFO     | process IDs to be killed: [5076] (in reverse order)
[2025-11-28 00:30:49] 2025-11-27 23:30:17,462 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:30:49] 2025-11-27 23:30:17,462 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:30:49] 2025-11-27 23:30:17,466 | INFO     | did not find any defunct processes belonging to 5076
[2025-11-28 00:30:49] 2025-11-27 23:30:17,468 | INFO     | did not find any defunct processes belonging to 5076
[2025-11-28 00:30:49] 2025-11-27 23:30:17,555 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:30:49] 2025-11-27 23:30:17,555 | INFO     | ready for new job
[2025-11-28 00:30:49] 2025-11-27 23:30:17,555 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:30:49] 2025-11-27 23:30:17,560 | INFO     | ***************************************
[2025-11-28 00:30:49] 2025-11-27 23:30:17,560 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:30:49] 2025-11-27 23:30:17,560 | INFO     | ***************************************
[2025-11-28 00:30:49] 2025-11-27 23:30:17,561 | INFO     | 
[2025-11-28 00:30:49] 2025-11-27 23:30:17,561 | INFO     | pilot is running in a VM
[2025-11-28 00:30:49] 2025-11-27 23:30:17,561 | INFO     | architecture information:
[2025-11-28 00:30:49] 2025-11-27 23:30:17,577 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:30:49] 2025-11-27 23:30:17,808 | INFO     | cat /etc/os-release:
[2025-11-28 00:30:49] NAME="CentOS Linux"
[2025-11-28 00:30:49] VERSION="7 (Core)"
[2025-11-28 00:30:49] ID="centos"
[2025-11-28 00:30:49] ID_LIKE="rhel fedora"
[2025-11-28 00:30:49] VERSION_ID="7"
[2025-11-28 00:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:30:49] ANSI_COLOR="0;31"
[2025-11-28 00:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:30:49] HOME_URL="https://www.centos.org/"
[2025-11-28 00:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:30:49] 
[2025-11-28 00:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:30:49] 
[2025-11-28 00:30:49] 2025-11-27 23:30:17,808 | INFO     | ***************************************
[2025-11-28 00:30:49] 2025-11-27 23:30:18,312 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-28 00:30:49] 2025-11-27 23:30:18,473 | INFO     | sufficient remaining disk space (494673068032 B)
[2025-11-28 00:30:49] 2025-11-27 23:30:18,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:30:49] 2025-11-27 23:30:18,474 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:30:49] 2025-11-27 23:30:18,474 | INFO     | update_server=False
[2025-11-28 00:30:49] 2025-11-27 23:30:18,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:30:49] 2025-11-27 23:30:18,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:30:49] 2025-11-27 23:30:18,863 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:30:49] 2025-11-27 23:30:18,864 | INFO     | aborting loop
[2025-11-28 00:30:49] 2025-11-27 23:30:18,982 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:30:49] 2025-11-27 23:30:19,098 | INFO     | all data control threads have been joined
[2025-11-28 00:30:49] 2025-11-27 23:30:19,184 | INFO     | all job control threads have been joined
[2025-11-28 00:30:49] 2025-11-27 23:30:19,344 | INFO     | all payload control threads have been joined
[2025-11-28 00:30:49] 2025-11-27 23:30:19,483 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:19,870 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:19,976 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,038 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,101 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:30:49] 2025-11-27 23:30:20,104 | INFO     | [data] control thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,190 | INFO     | [job] control thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,208 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,350 | INFO     | [payload] control thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,454 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,529 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,964 | INFO     | [job] validate thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,982 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:20,989 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:21,048 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:21,107 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:22,487 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:30:49] 2025-11-27 23:30:29,554 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:30:49] 2025-11-27 23:30:30,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356637226816)>', '<ExcThread(monitor, started 140356343543552)>']
[2025-11-28 00:30:49] 2025-11-27 23:30:35,638 | INFO     | all workflow threads have been joined
[2025-11-28 00:30:49] 2025-11-27 23:30:35,639 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:30:49] 2025-11-27 23:30:35,639 | INFO     | traces error code: 0
[2025-11-28 00:30:49] 2025-11-27 23:30:35,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:30:49] 2025-11-27 23:30:46,867 | INFO     | PID=30681 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 00:30:49] 2025-11-27 23:30:46,868 | INFO     | .. there are 9 such processes running
[2025-11-28 00:30:49] 2025-11-27 23:30:46,869 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:30:49] 2025-11-27 23:30:46,869 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:30:49] 2025-11-27 23:30:46,869 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:30:49] 2025-11-27 23:30:46,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:30:49] 2025-11-27 23:30:46,870 | INFO     | [monitor] control thread has ended
[2025-11-28 00:30:49] 2025-11-27 23:30:47,010 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:30:49] 2025-11-27 23:30:47,018 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:30:49] 2025-11-27 23:30:47,024 [wrapper] pilotpid: 30681
[2025-11-28 00:30:49] 2025-11-27 23:30:47,033 [wrapper] Pilot exit status: 0
[2025-11-28 00:30:49] 2025-11-27 23:30:47,067 [wrapper] pandaids: 6894238034
[2025-11-28 00:30:49] 2025-11-27 23:30:47,111 [wrapper] cleanup supervisor_pilot 10627 30682
[2025-11-28 00:30:49] 2025-11-27 23:30:47,113 [wrapper] Test setup, not cleaning
[2025-11-28 00:30:49] 2025-11-27 23:30:47,120 [wrapper] apfmon messages muted
[2025-11-28 00:30:49] 2025-11-27 23:30:47,129 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:30:49] 2025-11-27 23:30:47,140 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:30:49]  *** Error codes and diagnostics ***
[2025-11-28 00:30:49]     "exeErrorCode": 0,
[2025-11-28 00:30:49]     "exeErrorDiag": "",
[2025-11-28 00:30:49]     "pilotErrorCode": 0,
[2025-11-28 00:30:49]     "pilotErrorDiag": "",
[2025-11-28 00:30:49]  *** Listing of results directory ***
[2025-11-28 00:30:49] total 1335800
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc    576529 Nov 21 01:06 pilot3.tar.gz
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc      5112 Nov 21 01:15 queuedata.json
[2025-11-28 00:30:49] -rwx------. 1 boinc boinc     36292 Nov 21 01:16 runpilot2-wrapper.sh
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc       100 Nov 27 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:30:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 00:45 run_atlas
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc       105 Nov 27 00:45 job.xml
[2025-11-28 00:30:49] -rw-r--r--. 2 boinc boinc 409030485 Nov 27 00:45 EVNT.47493127._002040.pool.root.1
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc      6393 Nov 27 00:45 init_data.xml
[2025-11-28 00:30:49] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:45 start_atlas.sh
[2025-11-28 00:30:49] drwxrwx--x. 2 boinc boinc        68 Nov 27 00:45 shared
[2025-11-28 00:30:49] -rw-r--r--. 2 boinc boinc    590100 Nov 27 00:45 input.tar.gz
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc         0 Nov 27 00:45 boinc_lockfile
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc      2785 Nov 27 00:46 pandaJob.out
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc    991538 Nov 27 00:49 agis_schedconf.cvmfs.json
[2025-11-28 00:30:49] drwx------. 5 boinc boinc      4096 Nov 27 00:50 pilot3
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:06 boinc_task_state.xml
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc 927262627 Nov 28 00:27 HITS.47533967._000119.pool.root.1
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc      1028 Nov 28 00:28 memory_monitor_summary.json
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc   1516240 Nov 28 00:28 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc   2468495 Nov 28 00:28 log.47533967._000119.job.log.tgz.1
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc      7945 Nov 28 00:30 heartbeat.json
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc        29 Nov 28 00:30 wrapper_checkpoint.txt
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc      8192 Nov 28 00:30 boinc_mmap_file
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc        95 Nov 28 00:30 pilot_heartbeat.json
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc       820 Nov 28 00:30 pilotlog.txt
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc  11363816 Nov 28 00:30 log.47533967._000119.job.log.1
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc       353 Nov 28 00:30 output.list
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc       620 Nov 28 00:30 runtime_log
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc  13854720 Nov 28 00:30 result.tar.gz
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc      8833 Nov 28 00:30 runtime_log.err
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc       662 Nov 28 00:30 hVfLDmL0Tg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmiIKDmtdMEKn.diag
[2025-11-28 00:30:49] -rw-r--r--. 1 boinc boinc     21433 Nov 28 00:30 stderr.txt
[2025-11-28 00:30:49] HITS file was successfully produced:
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc 927262627 Nov 28 00:27 shared/HITS.pool.root.1
[2025-11-28 00:30:49]  *** Contents of shared directory: ***
[2025-11-28 00:30:49] total 1319104
[2025-11-28 00:30:49] -rw-r--r--. 2 boinc boinc 409030485 Nov 27 00:45 ATLAS.root_0
[2025-11-28 00:30:49] -rw-r--r--. 2 boinc boinc     15847 Nov 27 00:45 start_atlas.sh
[2025-11-28 00:30:49] -rw-r--r--. 2 boinc boinc    590100 Nov 27 00:45 input.tar.gz
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc 927262627 Nov 28 00:27 HITS.pool.root.1
[2025-11-28 00:30:49] -rw-------. 1 boinc boinc  13854720 Nov 28 00:30 result.tar.gz
00:30:51 (26828): run_atlas exited; CPU time 321345.518460
00:30:51 (26828): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN