Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:03:19 (1213962): wrapper (7.7.26015): starting
05:03:19 (1213962): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 05:03:19] Arguments: --nthreads 3
[2025-11-27 05:03:19] Threads: 3
[2025-11-27 05:03:19] Checking for CVMFS
[2025-11-27 05:03:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:03:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:03:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:03:19] 2.9.2.0 3803052 12159 69184 153345 3 81 35163889 36864000 0 130560 1 4361113 99.935 595197 766 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 05:03:19] CVMFS is ok
[2025-11-27 05:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:03:19] Further information can be found at the LHC@home message board.
[2025-11-27 05:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:03:19] Checking for apptainer binary...
[2025-11-27 05:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:03:19] Running /usr/bin/apptainer --version
[2025-11-27 05:03:19] apptainer version 1.4.1-1.1
[2025-11-27 05:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:03:20] thA333
[2025-11-27 05:03:20] apptainer works
[2025-11-27 05:03:20] Set ATHENA_PROC_NUMBER=3
[2025-11-27 05:03:20] Set ATHENA_CORE_NUMBER=3
[2025-11-27 05:03:20] Starting ATLAS job with PandaID=6895362756
[2025-11-27 05:03:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:57:27]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:57:27] 2025-11-27 12:56:55,305 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 13:57:27] 2025-11-27 12:56:55,318 | INFO     | sufficient remaining disk space (221429891072 B)
[2025-11-27 13:57:27] 2025-11-27 12:56:55,318 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:57:27] 2025-11-27 12:56:55,318 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:57:27] 2025-11-27 12:56:55,318 | INFO     | update_server=False
[2025-11-27 13:57:27] 2025-11-27 12:56:55,318 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:57:27] 2025-11-27 12:56:55,318 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:57:27] 2025-11-27 12:56:55,319 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:57:27] 2025-11-27 12:56:55,319 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:57:27] 2025-11-27 12:56:55,319 | INFO     | aborting loop
[2025-11-27 13:57:27] 2025-11-27 12:56:55,363 | INFO     | all job control threads have been joined
[2025-11-27 13:57:27] 2025-11-27 12:56:55,995 | INFO     | all data control threads have been joined
[2025-11-27 13:57:27] 2025-11-27 12:56:56,017 | INFO     | all payload control threads have been joined
[2025-11-27 13:57:27] 2025-11-27 12:56:56,324 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:56,325 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:56,325 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:56,369 | INFO     | [job] control thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:56,386 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:57:27] 2025-11-27 12:56:56,756 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:56,867 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:56,967 | INFO     | [job] validate thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:57,001 | INFO     | [data] control thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:57,023 | INFO     | [payload] control thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:57,470 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:57,510 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:57,695 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:57,714 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:58,392 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:56:59,325 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:57:05,730 | INFO     | job.realtimelogging is not enabled
[2025-11-27 13:57:27] 2025-11-27 12:57:06,736 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:57:27] 2025-11-27 12:57:15,349 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:57:27] 2025-11-27 12:57:15,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269169338176)>', '<ExcThread(monitor, started 140268464502528)>']
[2025-11-27 13:57:27] 2025-11-27 12:57:20,950 | INFO     | all workflow threads have been joined
[2025-11-27 13:57:27] 2025-11-27 12:57:20,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:57:27] 2025-11-27 12:57:20,951 | INFO     | traces error code: 0
[2025-11-27 13:57:27] 2025-11-27 12:57:20,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:57:27] 2025-11-27 12:57:26,278 | INFO     | PID=1217694 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:57:27] 2025-11-27 12:57:26,279 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:57:27] 2025-11-27 12:57:26,279 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:57:27] 2025-11-27 12:57:26,279 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:57:27] 2025-11-27 12:57:26,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:57:27] 2025-11-27 12:57:26,279 | INFO     | [monitor] control thread has ended
[2025-11-27 13:57:27] 2025-11-27 12:57:26,322 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:57:27] 2025-11-27 12:57:26,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:57:27] 2025-11-27 12:57:26,329 [wrapper] pilotpid: 1217694
[2025-11-27 13:57:27] 2025-11-27 12:57:26,331 [wrapper] Pilot exit status: 0
[2025-11-27 13:57:27] 2025-11-27 12:57:26,339 [wrapper] pandaids: 6895362756
[2025-11-27 13:57:27] 2025-11-27 12:57:26,355 [wrapper] cleanup supervisor_pilot 1280142 1217695
[2025-11-27 13:57:27] 2025-11-27 12:57:26,358 [wrapper] Test setup, not cleaning
[2025-11-27 13:57:27] 2025-11-27 12:57:26,361 [wrapper] apfmon messages muted
[2025-11-27 13:57:27] 2025-11-27 12:57:26,363 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:57:27] 2025-11-27 12:57:26,366 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:57:27]  *** Error codes and diagnostics ***
[2025-11-27 13:57:27]     "exeErrorCode": 0,
[2025-11-27 13:57:27]     "exeErrorDiag": "",
[2025-11-27 13:57:27]     "pilotErrorCode": 0,
[2025-11-27 13:57:27]     "pilotErrorDiag": "",
[2025-11-27 13:57:27]  *** Listing of results directory ***
[2025-11-27 13:57:27] total 1320020
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc    576529 Nov 23 16:18 pilot3.tar.gz
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc      5112 Nov 23 16:23 queuedata.json
[2025-11-27 13:57:27] -rwx------ 1 boinc boinc     36292 Nov 23 16:25 runpilot2-wrapper.sh
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc       100 Nov 27 05:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:57:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 05:03 run_atlas
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc       105 Nov 27 05:03 job.xml
[2025-11-27 13:57:27] -rw-r--r-- 2 boinc boinc 408241991 Nov 27 05:03 EVNT.47483658._000792.pool.root.1
[2025-11-27 13:57:27] -rw-r--r-- 2 boinc boinc    590104 Nov 27 05:03 input.tar.gz
[2025-11-27 13:57:27] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:03 start_atlas.sh
[2025-11-27 13:57:27] drwxrwx--x 2 boinc boinc      4096 Nov 27 05:03 shared
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:03 boinc_setup_complete
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc      6198 Nov 27 05:03 init_data.xml
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:03 boinc_lockfile
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc      2785 Nov 27 05:03 pandaJob.out
[2025-11-27 13:57:27] -rw------- 1 boinc boinc    991546 Nov 27 05:03 agis_schedconf.cvmfs.json
[2025-11-27 13:57:27] drwx------ 5 boinc boinc      4096 Nov 27 05:03 pilot3
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc       531 Nov 27 13:52 boinc_task_state.xml
[2025-11-27 13:57:27] -rw------- 1 boinc boinc 928146724 Nov 27 13:56 HITS.47556137._007789.pool.root.1
[2025-11-27 13:57:27] -rw------- 1 boinc boinc      1023 Nov 27 13:56 memory_monitor_summary.json
[2025-11-27 13:57:27] -rw------- 1 boinc boinc   1516240 Nov 27 13:56 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:57:27] -rw------- 1 boinc boinc   1205824 Nov 27 13:56 log.47556137._007789.job.log.tgz.1
[2025-11-27 13:57:27] -rw------- 1 boinc boinc      8563 Nov 27 13:56 heartbeat.json
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc        28 Nov 27 13:57 wrapper_checkpoint.txt
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc      8192 Nov 27 13:57 boinc_mmap_file
[2025-11-27 13:57:27] -rw------- 1 boinc boinc       747 Nov 27 13:57 pilotlog.txt
[2025-11-27 13:57:27] -rw------- 1 boinc boinc        95 Nov 27 13:57 pilot_heartbeat.json
[2025-11-27 13:57:27] -rw------- 1 boinc boinc   4500737 Nov 27 13:57 log.47556137._007789.job.log.1
[2025-11-27 13:57:27] -rw------- 1 boinc boinc       353 Nov 27 13:57 output.list
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc       620 Nov 27 13:57 runtime_log
[2025-11-27 13:57:27] -rw------- 1 boinc boinc   5724160 Nov 27 13:57 result.tar.gz
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc      8898 Nov 27 13:57 runtime_log.err
[2025-11-27 13:57:27] -rw------- 1 boinc boinc       665 Nov 27 13:57 PaEODmk8Qh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmY0KKDmNXLsIm.diag
[2025-11-27 13:57:27] -rw-r--r-- 1 boinc boinc      7957 Nov 27 13:57 stderr.txt
[2025-11-27 13:57:27] HITS file was successfully produced:
[2025-11-27 13:57:27] -rw------- 1 boinc boinc 928146724 Nov 27 13:56 shared/HITS.pool.root.1
[2025-11-27 13:57:27]  *** Contents of shared directory: ***
[2025-11-27 13:57:27] total 1311268
[2025-11-27 13:57:27] -rw-r--r-- 2 boinc boinc 408241991 Nov 27 05:03 ATLAS.root_0
[2025-11-27 13:57:27] -rw-r--r-- 2 boinc boinc    590104 Nov 27 05:03 input.tar.gz
[2025-11-27 13:57:27] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:03 start_atlas.sh
[2025-11-27 13:57:27] -rw------- 1 boinc boinc 928146724 Nov 27 13:56 HITS.pool.root.1
[2025-11-27 13:57:27] -rw------- 1 boinc boinc   5724160 Nov 27 13:57 result.tar.gz
13:57:28 (1213962): run_atlas exited; CPU time 94535.744710
13:57:28 (1213962): called boinc_finish(0)

</stderr_txt>
]]>

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