Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:50:39 (3368644): wrapper (7.7.26015): starting
02:50:39 (3368644): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 02:50:39] Arguments: --nthreads 8
[2025-11-24 02:50:39] Threads: 8
[2025-11-24 02:50:39] Checking for CVMFS
[2025-11-24 02:50:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 02:50:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 02:50:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 02:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 02:50:39] 2.11.3.0 920209 25407 190784 153242 0 96 43193137 45568001 9186 130560 0 180425177 99.808 106306426 21846 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-24 02:50:39] CVMFS is ok
[2025-11-24 02:50:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 02:50:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 02:50:39] Further information can be found at the LHC@home message board.
[2025-11-24 02:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 02:50:39] Checking for apptainer binary...
[2025-11-24 02:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 02:50:39] Running /usr/bin/apptainer --version
[2025-11-24 02:50:39] apptainer version 1.4.1-1.el9
[2025-11-24 02:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 02:50:39] wns0020.triumf.lcg
[2025-11-24 02:50:39] apptainer works
[2025-11-24 02:50:39] Set ATHENA_PROC_NUMBER=8
[2025-11-24 02:50:39] Set ATHENA_CORE_NUMBER=8
[2025-11-24 02:50:39] Starting ATLAS job with PandaID=6894053177
[2025-11-24 02:50:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:54:14]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | found no stored workdir sizes
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | INFO     | will not add max space = 0 B to job metrics
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | WARNING  | wrong length of table data, x=[1763981478.0], y=[1202.0] (must be same and length>=4)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | ..............................
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . Timing measurements:
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . get job = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . initial setup = 2 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . payload setup = 5 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . stage-in = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . payload execution = 26 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . stage-out = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . log creation = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | ..............................
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894053177/pilotlog.txt
[2025-11-24 02:54:14] 2025-11-24 10:53:42,570 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 02:54:14] - Log from pilotlog.txt -
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | found no stored workdir sizes
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | INFO     | will not add max space = 0 B to job metrics
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | WARNING  | wrong length of table data, x=[1763981478.0], y=[1202.0] (must be same and length>=4)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | ..............................
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . Timing measurements:
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . get job = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . initial setup = 2 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . payload setup = 5 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . stage-in = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . payload execution = 26 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . stage-out = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . log creation = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | ..............................
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894053177/pilotlog.txt
[2025-11-24 02:54:14] 2025-11-24 10:53:42,571 | WARNING  | 
[2025-11-24 02:54:14] [begin log extracts]
[2025-11-24 02:54:14] - Log from pilotlog.txt -
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | WARNING  | found no stored workdir sizes
[2025-11-24 02:54:14] 2025-11-24 10:53:42,539 | INFO     | will not add max space = 0 B to job metrics
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | WARNING  | wrong length of table data, x=[1763981478.0], y=[1202.0] (must be same and length>=4)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | ..............................
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . Timing measurements:
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . get job = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . initial setup = 2 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . payload setup = 5 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,540 | INFO     | . stage-in = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . payload execution = 26 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . stage-out = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | . log creation = 0 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | ..............................
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 02:54:14] 2025-11-24 10:53:42,541 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6894053177/pilotlog.txt
[2025-11-24 02:54:14] [end log extracts]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,571 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,571 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | 
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | job summary report
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | --------------------------------------------------
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | PanDA job id: 6894053177
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | task id: 47523618
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 02:51:34,566 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | pilot state: failed 
[2025-11-24 02:54:14] 2025-11-24 10:53:42,648 | INFO     | transexitcode: 65
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | exeerrorcode: 65
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | exitcode: 65
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | cpuconsumptiontime: 18 s
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | nevents: 0
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | neventsw: 0
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | pid: 3378797
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | pgrp: 3378797
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | corecount: 8
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | event service: False
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | sizes: {0: 2298388, 4: 2298650, 11: 2298678, 35: 2321879, 36: 2326199, 157: 2326337}
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | --------------------------------------------------
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | 
[2025-11-24 02:54:14] 2025-11-24 10:53:42,649 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 02:54:14] 2025-11-24 10:53:42,669 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,669 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,670 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | job 6894053177 has completed (purged errors)
[2025-11-24 02:54:14] 2025-11-24 10:53:42,671 | INFO     | overall cleanup function is called
[2025-11-24 02:54:14] 2025-11-24 10:53:43,678 | INFO     | --- collectZombieJob: --- 10, [3378797]
[2025-11-24 02:54:14] 2025-11-24 10:53:43,679 | INFO     | zombie collector waiting for pid 3378797
[2025-11-24 02:54:14] 2025-11-24 10:53:43,679 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:54:14] 2025-11-24 10:53:43,679 | INFO     | collected zombie processes
[2025-11-24 02:54:14] 2025-11-24 10:53:43,679 | INFO     | will attempt to kill all subprocesses of pid=3378797
[2025-11-24 02:54:14] 2025-11-24 10:53:43,833 | INFO     | process IDs to be killed: [3378797] (in reverse order)
[2025-11-24 02:54:14] 2025-11-24 10:53:43,902 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:54:14] 2025-11-24 10:53:43,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:54:14] 2025-11-24 10:53:43,909 | INFO     | did not find any defunct processes belonging to 3378797
[2025-11-24 02:54:14] 2025-11-24 10:53:43,914 | INFO     | did not find any defunct processes belonging to 3378797
[2025-11-24 02:54:14] 2025-11-24 10:53:43,914 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:54:14] 2025-11-24 10:53:43,915 | INFO     | ready for new job
[2025-11-24 02:54:14] 2025-11-24 10:53:43,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:54:14] 2025-11-24 10:53:43,916 | INFO     | ***************************************
[2025-11-24 02:54:14] 2025-11-24 10:53:43,916 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:54:14] 2025-11-24 10:53:43,916 | INFO     | ***************************************
[2025-11-24 02:54:14] 2025-11-24 10:53:43,916 | INFO     | 
[2025-11-24 02:54:14] 2025-11-24 10:53:43,917 | INFO     | architecture information:
[2025-11-24 02:54:14] 2025-11-24 10:53:43,918 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:54:14] 2025-11-24 10:53:43,938 | INFO     | cat /etc/os-release:
[2025-11-24 02:54:14] NAME="CentOS Linux"
[2025-11-24 02:54:14] VERSION="7 (Core)"
[2025-11-24 02:54:14] ID="centos"
[2025-11-24 02:54:14] ID_LIKE="rhel fedora"
[2025-11-24 02:54:14] VERSION_ID="7"
[2025-11-24 02:54:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:54:14] ANSI_COLOR="0;31"
[2025-11-24 02:54:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:54:14] HOME_URL="https://www.centos.org/"
[2025-11-24 02:54:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:54:14] 
[2025-11-24 02:54:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:54:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:54:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:54:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:54:14] 
[2025-11-24 02:54:14] 2025-11-24 10:53:43,939 | INFO     | ***************************************
[2025-11-24 02:54:14] 2025-11-24 10:53:44,441 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 02:54:14] 2025-11-24 10:53:44,459 | INFO     | sufficient remaining disk space (1163965497344 B)
[2025-11-24 02:54:14] 2025-11-24 10:53:44,459 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:54:14] 2025-11-24 10:53:44,460 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:54:14] 2025-11-24 10:53:44,460 | INFO     | update_server=False
[2025-11-24 02:54:14] 2025-11-24 10:53:44,460 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:54:14] 2025-11-24 10:53:44,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:54:14] 2025-11-24 10:53:44,460 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:54:14] 2025-11-24 10:53:44,460 | INFO     | aborting loop
[2025-11-24 02:54:14] 2025-11-24 10:53:44,669 | INFO     | all data control threads have been joined
[2025-11-24 02:54:14] 2025-11-24 10:53:44,772 | INFO     | all payload control threads have been joined
[2025-11-24 02:54:14] 2025-11-24 10:53:45,465 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:45,466 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:45,466 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:45,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:54:14] 2025-11-24 10:53:45,576 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:54:14] 2025-11-24 10:53:45,593 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:45,675 | INFO     | [data] control thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:45,714 | INFO     | all job control threads have been joined
[2025-11-24 02:54:14] 2025-11-24 10:53:45,778 | INFO     | [payload] control thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,064 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,226 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,517 | INFO     | [job] validate thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,537 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,663 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,720 | INFO     | [job] control thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,820 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:46,965 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:47,475 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:49,583 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:54:14] 2025-11-24 10:53:50,529 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:54:14] 2025-11-24 10:53:52,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630182618944)>', '<ExcThread(monitor, started 139629512615680)>']
[2025-11-24 02:54:14] 2025-11-24 10:53:57,095 | INFO     | all workflow threads have been joined
[2025-11-24 02:54:14] 2025-11-24 10:53:57,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:54:14] 2025-11-24 10:53:57,096 | INFO     | traces error code: 0
[2025-11-24 02:54:14] 2025-11-24 10:53:57,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:54:14] 2025-11-24 10:54:14,589 | INFO     | PID=3372283 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 02:54:14] 2025-11-24 10:54:14,589 | INFO     | .. there are 12 such processes running
[2025-11-24 02:54:14] 2025-11-24 10:54:14,590 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:54:14] 2025-11-24 10:54:14,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:54:14] 2025-11-24 10:54:14,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:54:14] 2025-11-24 10:54:14,590 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:54:14] 2025-11-24 10:54:14,590 | INFO     | [monitor] control thread has ended
[2025-11-24 02:54:14] 2025-11-24 10:54:14,715 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:54:14] 2025-11-24 10:54:14,717 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:54:14] 2025-11-24 10:54:14,719 [wrapper] pilotpid: 3372283
[2025-11-24 02:54:14] 2025-11-24 10:54:14,721 [wrapper] Pilot exit status: 0
[2025-11-24 02:54:14] 2025-11-24 10:54:14,731 [wrapper] pandaids: 6894053177
[2025-11-24 02:54:14] 2025-11-24 10:54:14,761 [wrapper] cleanup supervisor_pilot 3372289 3372284
[2025-11-24 02:54:14] 2025-11-24 10:54:14,763 [wrapper] Test setup, not cleaning
[2025-11-24 02:54:14] 2025-11-24 10:54:14,766 [wrapper] apfmon messages muted
[2025-11-24 02:54:14] 2025-11-24 10:54:14,768 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:54:14] 2025-11-24 10:54:14,770 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:54:14]  *** Error codes and diagnostics ***
[2025-11-24 02:54:14]     "exeErrorCode": 65,
[2025-11-24 02:54:14]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-11-24 02:54:14]     "pilotErrorCode": 1305,
[2025-11-24 02:54:14]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-11-24 02:54:14]  *** Listing of results directory ***
[2025-11-24 02:54:14] total 305264
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc    576529 Nov 23 15:11 pilot3.tar.gz
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc      5112 Nov 23 15:52 queuedata.json
[2025-11-24 02:54:14] -rwx------. 1 boinc boinc     36292 Nov 23 15:53 runpilot2-wrapper.sh
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc       100 Nov 24 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:54:14] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 02:50 run_atlas
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc       105 Nov 24 02:50 job.xml
[2025-11-24 02:54:14] -rw-r--r--. 2 boinc boinc 308463861 Nov 24 02:50 EVNT.47523616._000005.pool.root.1
[2025-11-24 02:54:14] drwxrwx--x. 2 boinc boinc      4096 Nov 24 02:50 shared
[2025-11-24 02:54:14] -rw-r--r--. 2 boinc boinc    589948 Nov 24 02:50 input.tar.gz
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc      6445 Nov 24 02:50 init_data.xml
[2025-11-24 02:54:14] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:50 start_atlas.sh
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc         0 Nov 24 02:50 boinc_lockfile
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc      2612 Nov 24 02:50 pandaJob.out
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc    989824 Nov 24 02:50 agis_schedconf.cvmfs.json
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc   1526164 Nov 24 02:50 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:54:14] drwx------. 5 boinc boinc      4096 Nov 24 02:50 pilot3
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc       522 Nov 24 02:51 boinc_task_state.xml
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc       950 Nov 24 02:51 memory_monitor_summary.json
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc     21229 Nov 24 02:51 log.47523618._000123.job.log.tgz.1
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc      8384 Nov 24 02:53 heartbeat.json
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc      8192 Nov 24 02:54 boinc_mmap_file
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc        22 Nov 24 02:54 wrapper_checkpoint.txt
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc        95 Nov 24 02:54 pilot_heartbeat.json
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc       823 Nov 24 02:54 pilotlog.txt
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc     86348 Nov 24 02:54 log.47523618._000123.job.log.1
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc       188 Nov 24 02:54 output.list
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc       620 Nov 24 02:54 runtime_log
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc    122880 Nov 24 02:54 result.tar.gz
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc      8634 Nov 24 02:54 runtime_log.err
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc       647 Nov 24 02:54 DgwLDm54Yh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmEqIKDmHDtpGo.diag
[2025-11-24 02:54:14] -rw-r--r--. 1 boinc boinc     21737 Nov 24 02:54 stderr.txt
[2025-11-24 02:54:14] No HITS result produced
[2025-11-24 02:54:14]  *** Contents of shared directory: ***
[2025-11-24 02:54:14] total 301956
[2025-11-24 02:54:14] -rw-r--r--. 2 boinc boinc 308463861 Nov 24 02:50 ATLAS.root_0
[2025-11-24 02:54:14] -rw-r--r--. 2 boinc boinc    589948 Nov 24 02:50 input.tar.gz
[2025-11-24 02:54:14] -rw-r--r--. 2 boinc boinc     15847 Nov 24 02:50 start_atlas.sh
[2025-11-24 02:54:14] -rw-------. 1 boinc boinc    122880 Nov 24 02:54 result.tar.gz
02:54:16 (3368644): run_atlas exited; CPU time 23.503186
02:54:16 (3368644): called boinc_finish(0)

</stderr_txt>
]]>

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