Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:48:04 (29799): wrapper (7.7.26015): starting
05:48:04 (29799): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:48:04] Arguments: --nthreads 8
[2025-11-24 05:48:04] Threads: 8
[2025-11-24 05:48:04] Checking for CVMFS
[2025-11-24 05:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:48:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:48:05] 2.11.2.0 2954 69964 81332 153242 2 81 15692593 20275201 1 130560 0 20837951 99.942 2944111 29533 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 05:48:05] CVMFS is ok
[2025-11-24 05:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:48:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:48:05] Further information can be found at the LHC@home message board.
[2025-11-24 05:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:48:05] Checking for apptainer binary...
[2025-11-24 05:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:48:05] Running /usr/bin/apptainer --version
[2025-11-24 05:48:05] apptainer version 1.3.2-1.el7
[2025-11-24 05:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:48:06] c-115-12.aglt2.org
[2025-11-24 05:48:06] apptainer works
[2025-11-24 05:48:06] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:48:06] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:48:06] Starting ATLAS job with PandaID=6895361832
[2025-11-24 05:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:17:38]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:17:38] 2025-11-24 22:16:51,117 | INFO     | monitor loop #3016: job 0:6895361832 is in state 'finished'
[2025-11-24 17:17:38] 2025-11-24 22:16:51,117 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:17:38] 2025-11-24 22:16:51,244 | INFO     | time since job start (41307s) is within the limit (172800.0s)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,666 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:17:38] 2025-11-24 22:16:52,671 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.125
[2025-11-24 17:17:38] 2025-11-24 22:16:52,673 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895361832/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,674 | INFO     | extracted standard info from prmon json
[2025-11-24 17:17:38] 2025-11-24 22:16:52,674 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:17:38] 2025-11-24 22:16:52,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:17:38] 2025-11-24 22:16:52,684 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:17:38] 2025-11-24 22:16:52,685 | INFO     | sum of square deviations: 96215556480.4519
[2025-11-24 17:17:38] 2025-11-24 22:16:52,694 | INFO     | sum of deviations: 776100668781.7219
[2025-11-24 17:17:38] 2025-11-24 22:16:52,694 | INFO     | mean x: 1764001953.6262925
[2025-11-24 17:17:38] 2025-11-24 22:16:52,694 | INFO     | mean y: 2998307.7459379616
[2025-11-24 17:17:38] 2025-11-24 22:16:52,695 | INFO     | intersect: -14225917950.9235
[2025-11-24 17:17:38] 2025-11-24 22:16:52,695 | INFO     | chi2: 5.820997219859625
[2025-11-24 17:17:38] 2025-11-24 22:16:52,696 | INFO     | sum of square deviations: 94099590308.4762
[2025-11-24 17:17:38] 2025-11-24 22:16:52,704 | INFO     | sum of deviations: 998818407092.1545
[2025-11-24 17:17:38] 2025-11-24 22:16:52,704 | INFO     | mean x: 1764001801.1309524
[2025-11-24 17:17:38] 2025-11-24 22:16:52,705 | INFO     | mean y: 3014346.055059524
[2025-11-24 17:17:38] 2025-11-24 22:16:52,705 | INFO     | intersect: -18720951011.683605
[2025-11-24 17:17:38] 2025-11-24 22:16:52,705 | INFO     | chi2: 2.930760097177563
[2025-11-24 17:17:38] 2025-11-24 22:16:52,705 | INFO     | current chi2=2.930760097177563 (change=49.65192412085984 %)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,706 | INFO     | sum of square deviations: 92014880536.47086
[2025-11-24 17:17:38] 2025-11-24 22:16:52,714 | INFO     | sum of deviations: 1061078088630.8868
[2025-11-24 17:17:38] 2025-11-24 22:16:52,715 | INFO     | mean x: 1764001648.635682
[2025-11-24 17:17:38] 2025-11-24 22:16:52,715 | INFO     | mean y: 3018888.752623688
[2025-11-24 17:17:38] 2025-11-24 22:16:52,715 | INFO     | intersect: -20338728954.24112
[2025-11-24 17:17:38] 2025-11-24 22:16:52,715 | INFO     | chi2: 2.5354007157676985
[2025-11-24 17:17:38] 2025-11-24 22:16:52,716 | INFO     | current chi2=2.5354007157676985 (change=13.489994687405876 %)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,716 | INFO     | right removable region: 666
[2025-11-24 17:17:38] 2025-11-24 22:16:52,716 | INFO     | sum of square deviations: 94099331668.47615
[2025-11-24 17:17:38] 2025-11-24 22:16:52,725 | INFO     | sum of deviations: 580582008765.3583
[2025-11-24 17:17:38] 2025-11-24 22:16:52,725 | INFO     | mean x: 1764002106.1309524
[2025-11-24 17:17:38] 2025-11-24 22:16:52,725 | INFO     | mean y: 3012371.223214286
[2025-11-24 17:17:38] 2025-11-24 22:16:52,726 | INFO     | intersect: -10880676897.17705
[2025-11-24 17:17:38] 2025-11-24 22:16:52,726 | INFO     | chi2: 3.492830348028847
[2025-11-24 17:17:38] 2025-11-24 22:16:52,726 | INFO     | current chi2=3.492830348028847 (change=39.99601415179721 %)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,727 | INFO     | sum of square deviations: 92014404248.74086
[2025-11-24 17:17:38] 2025-11-24 22:16:52,736 | INFO     | sum of deviations: 539566323557.54846
[2025-11-24 17:17:38] 2025-11-24 22:16:52,736 | INFO     | mean x: 1764002258.634183
[2025-11-24 17:17:38] 2025-11-24 22:16:52,736 | INFO     | mean y: 3015369.5022488753
[2025-11-24 17:17:38] 2025-11-24 22:16:52,736 | INFO     | intersect: -10340976108.891552
[2025-11-24 17:17:38] 2025-11-24 22:16:52,737 | INFO     | chi2: 3.4535933381038655
[2025-11-24 17:17:38] 2025-11-24 22:16:52,737 | INFO     | current chi2=3.4535933381038655 (change=1.123358595046702 %)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,737 | INFO     | left removable region: 20
[2025-11-24 17:17:38] 2025-11-24 22:16:52,738 | INFO     | sum of square deviations: 83594418112.32185
[2025-11-24 17:17:38] 2025-11-24 22:16:52,746 | INFO     | sum of deviations: 767235024684.6218
[2025-11-24 17:17:38] 2025-11-24 22:16:52,746 | INFO     | mean x: 1764002228.145511
[2025-11-24 17:17:38] 2025-11-24 22:16:52,746 | INFO     | mean y: 3040504.886996904
[2025-11-24 17:17:38] 2025-11-24 22:16:52,746 | INFO     | intersect: -16187087061.243599
[2025-11-24 17:17:38] 2025-11-24 22:16:52,747 | INFO     | chi2: 0.12974332505545758
[2025-11-24 17:17:38] 2025-11-24 22:16:52,747 | INFO     | current memory leak: 9.18 B/s (using 646 data points, chi2=0.13)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,748 | INFO     | could have reported an average CPU frequency of 2404 MHz (26 samples)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,748 | INFO     | ..............................
[2025-11-24 17:17:38] 2025-11-24 22:16:52,748 | INFO     | . Timing measurements:
[2025-11-24 17:17:38] 2025-11-24 22:16:52,748 | INFO     | . get job = 0 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,748 | INFO     | . initial setup = 2 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,749 | INFO     | . payload setup = 8 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,749 | INFO     | . stage-in = 0 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,749 | INFO     | . payload execution = 41268 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,749 | INFO     | . stage-out = 3 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,749 | INFO     | . log creation = 0 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,749 | INFO     | ..............................
[2025-11-24 17:17:38] 2025-11-24 22:16:52,833 | INFO     | 
[2025-11-24 17:17:38] 2025-11-24 22:16:52,833 | INFO     | job summary report
[2025-11-24 17:17:38] 2025-11-24 22:16:52,833 | INFO     | --------------------------------------------------
[2025-11-24 17:17:38] 2025-11-24 22:16:52,833 | INFO     | PanDA job id: 6895361832
[2025-11-24 17:17:38] 2025-11-24 22:16:52,834 | INFO     | task id: 47556137
[2025-11-24 17:17:38] 2025-11-24 22:16:52,834 | INFO     | errors: (none)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,834 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:17:38] 2025-11-24 22:16:52,834 | INFO     | pilot state: finished 
[2025-11-24 17:17:38] 2025-11-24 22:16:52,834 | INFO     | transexitcode: 0
[2025-11-24 17:17:38] 2025-11-24 22:16:52,834 | INFO     | exeerrorcode: 0
[2025-11-24 17:17:38] 2025-11-24 22:16:52,835 | INFO     | exeerrordiag: 
[2025-11-24 17:17:38] 2025-11-24 22:16:52,835 | INFO     | exitcode: 0
[2025-11-24 17:17:38] 2025-11-24 22:16:52,835 | INFO     | exitmsg: OK
[2025-11-24 17:17:38] 2025-11-24 22:16:52,835 | INFO     | cpuconsumptiontime: 321826 s
[2025-11-24 17:17:38] 2025-11-24 22:16:52,835 | INFO     | nevents: 1000
[2025-11-24 17:17:38] 2025-11-24 22:16:52,835 | INFO     | neventsw: 0
[2025-11-24 17:17:38] 2025-11-24 22:16:52,836 | INFO     | pid: 7715
[2025-11-24 17:17:38] 2025-11-24 22:16:52,836 | INFO     | pgrp: 7715
[2025-11-24 17:17:38] 2025-11-24 22:16:52,836 | INFO     | corecount: 8
[2025-11-24 17:17:38] 2025-11-24 22:16:52,836 | INFO     | event service: False
[2025-11-24 17:17:38] 2025-11-24 22:16:52,836 | INFO     | sizes: {0: 2297928, 1: 2298784, 7: 2299046, 12: 2299074, 41280: 2343088, 41281: 2343087, 41285: 2353112, 41292: 2353302}
[2025-11-24 17:17:38] 2025-11-24 22:16:52,836 | INFO     | --------------------------------------------------
[2025-11-24 17:17:38] 2025-11-24 22:16:52,837 | INFO     | 
[2025-11-24 17:17:38] 2025-11-24 22:16:52,837 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:17:38] 2025-11-24 22:16:52,866 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,866 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,866 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,867 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,867 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,867 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,867 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,867 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,867 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,868 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,868 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,868 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,868 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,868 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,868 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,869 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,869 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:17:38] 2025-11-24 22:16:52,870 | INFO     | job 6895361832 has completed (purged errors)
[2025-11-24 17:17:38] 2025-11-24 22:16:52,870 | INFO     | overall cleanup function is called
[2025-11-24 17:17:38] 2025-11-24 22:16:53,883 | INFO     | --- collectZombieJob: --- 10, [7715]
[2025-11-24 17:17:38] 2025-11-24 22:16:53,883 | INFO     | zombie collector waiting for pid 7715
[2025-11-24 17:17:38] 2025-11-24 22:16:53,884 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:17:38] 2025-11-24 22:16:53,884 | INFO     | collected zombie processes
[2025-11-24 17:17:38] 2025-11-24 22:16:53,884 | INFO     | will attempt to kill all subprocesses of pid=7715
[2025-11-24 17:17:38] 2025-11-24 22:16:53,967 | INFO     | process IDs to be killed: [7715] (in reverse order)
[2025-11-24 17:17:38] 2025-11-24 22:16:54,023 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:17:38] 2025-11-24 22:16:54,023 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:17:38] 2025-11-24 22:16:54,028 | INFO     | did not find any defunct processes belonging to 7715
[2025-11-24 17:17:38] 2025-11-24 22:16:54,031 | INFO     | did not find any defunct processes belonging to 7715
[2025-11-24 17:17:38] 2025-11-24 22:16:54,033 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:17:38] 2025-11-24 22:16:54,034 | INFO     | ready for new job
[2025-11-24 17:17:38] 2025-11-24 22:16:54,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:17:38] 2025-11-24 22:16:54,036 | INFO     | ***************************************
[2025-11-24 17:17:38] 2025-11-24 22:16:54,037 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:17:38] 2025-11-24 22:16:54,037 | INFO     | ***************************************
[2025-11-24 17:17:38] 2025-11-24 22:16:54,037 | INFO     | 
[2025-11-24 17:17:38] 2025-11-24 22:16:54,037 | INFO     | architecture information:
[2025-11-24 17:17:38] 2025-11-24 22:16:54,038 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:17:38] 2025-11-24 22:16:54,056 | INFO     | cat /etc/os-release:
[2025-11-24 17:17:38] NAME="CentOS Linux"
[2025-11-24 17:17:38] VERSION="7 (Core)"
[2025-11-24 17:17:38] ID="centos"
[2025-11-24 17:17:38] ID_LIKE="rhel fedora"
[2025-11-24 17:17:38] VERSION_ID="7"
[2025-11-24 17:17:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:17:38] ANSI_COLOR="0;31"
[2025-11-24 17:17:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:17:38] HOME_URL="https://www.centos.org/"
[2025-11-24 17:17:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:17:38] 
[2025-11-24 17:17:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:17:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:17:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:17:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:17:38] 
[2025-11-24 17:17:38] 2025-11-24 22:16:54,057 | INFO     | ***************************************
[2025-11-24 17:17:38] 2025-11-24 22:16:54,560 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:17:38] 2025-11-24 22:16:54,580 | INFO     | sufficient remaining disk space (17608736768 B)
[2025-11-24 17:17:38] 2025-11-24 22:16:54,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:17:38] 2025-11-24 22:16:54,580 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:17:38] 2025-11-24 22:16:54,580 | INFO     | update_server=False
[2025-11-24 17:17:38] 2025-11-24 22:16:54,581 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:17:38] 2025-11-24 22:16:54,581 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:17:38] 2025-11-24 22:16:54,581 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:17:38] 2025-11-24 22:16:54,626 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:17:38] 2025-11-24 22:16:54,626 | INFO     | aborting loop
[2025-11-24 17:17:38] 2025-11-24 22:16:54,838 | INFO     | all payload control threads have been joined
[2025-11-24 17:17:38] 2025-11-24 22:16:55,322 | INFO     | all data control threads have been joined
[2025-11-24 17:17:38] 2025-11-24 22:16:55,586 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:55,587 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:55,632 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:55,646 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:55,843 | INFO     | [payload] control thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:55,911 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,047 | INFO     | all job control threads have been joined
[2025-11-24 17:17:38] 2025-11-24 22:16:56,328 | INFO     | [data] control thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:17:38] 2025-11-24 22:16:56,479 | INFO     | [job] validate thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,485 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,497 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,587 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,598 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:56,607 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:16:57,050 | INFO     | [job] control thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:17:00,486 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:17:05,410 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:17:38] 2025-11-24 22:17:06,415 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:17:38] 2025-11-24 22:17:24,365 | INFO     | PID=1018 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 17:17:38] 2025-11-24 22:17:24,365 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:17:38] 2025-11-24 22:17:24,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:17:38] 2025-11-24 22:17:24,366 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:17:38] 2025-11-24 22:17:32,470 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:17:38] 2025-11-24 22:17:33,237 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140677139773248)>', '<ExcThread(monitor, started 140676486395648)>']
[2025-11-24 17:17:38] 2025-11-24 22:17:33,408 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:17:38] 2025-11-24 22:17:33,408 | INFO     | [monitor] control thread has ended
[2025-11-24 17:17:38] 2025-11-24 22:17:38,247 | INFO     | all workflow threads have been joined
[2025-11-24 17:17:38] 2025-11-24 22:17:38,248 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:17:38] 2025-11-24 22:17:38,248 | INFO     | traces error code: 0
[2025-11-24 17:17:38] 2025-11-24 22:17:38,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:17:38] 2025-11-24 22:17:38,349 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:17:38] 2025-11-24 22:17:38,354 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:17:38] 2025-11-24 22:17:38,359 [wrapper] pilotpid: 1018
[2025-11-24 17:17:38] 2025-11-24 22:17:38,364 [wrapper] Pilot exit status: 0
[2025-11-24 17:17:38] 2025-11-24 22:17:38,379 [wrapper] pandaids: 6895361832
[2025-11-24 17:17:38] 2025-11-24 22:17:38,425 [wrapper] cleanup supervisor_pilot 30670 1019
[2025-11-24 17:17:38] 2025-11-24 22:17:38,429 [wrapper] Test setup, not cleaning
[2025-11-24 17:17:38] 2025-11-24 22:17:38,434 [wrapper] apfmon messages muted
[2025-11-24 17:17:38] 2025-11-24 22:17:38,439 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:17:38] 2025-11-24 22:17:38,443 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:17:38]  *** Error codes and diagnostics ***
[2025-11-24 17:17:38]     "exeErrorCode": 0,
[2025-11-24 17:17:38]     "exeErrorDiag": "",
[2025-11-24 17:17:38]     "pilotErrorCode": 0,
[2025-11-24 17:17:38]     "pilotErrorDiag": "",
[2025-11-24 17:17:38]  *** Listing of results directory ***
[2025-11-24 17:17:38] total 1318372
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 09:16 pilot3.tar.gz
[2025-11-24 17:17:38] -rwx------ 1 boincer umatlas     36292 Nov 23 09:36 runpilot2-wrapper.sh
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 09:36 queuedata.json
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas       100 Nov 24 05:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:17:38] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 05:48 run_atlas
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas       105 Nov 24 05:48 job.xml
[2025-11-24 17:17:38] -rw-r--r-- 2 boincer umatlas 406703499 Nov 24 05:48 EVNT.47483658._000765.pool.root.1
[2025-11-24 17:17:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 05:48 start_atlas.sh
[2025-11-24 17:17:38] drwxrwx--x 2 boincer umatlas      4096 Nov 24 05:48 shared
[2025-11-24 17:17:38] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 05:48 input.tar.gz
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas         0 Nov 24 05:48 boinc_lockfile
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 05:48 pandaJob.out
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas        57 Nov 24 05:48 setup.sh.local
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas    989824 Nov 24 05:48 agis_schedconf.cvmfs.json
[2025-11-24 17:17:38] drwx------ 5 boincer umatlas      4096 Nov 24 05:48 pilot3
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas       533 Nov 24 17:06 boinc_task_state.xml
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas      5913 Nov 24 17:12 init_data.xml
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas 924201640 Nov 24 17:16 HITS.47556137._007606.pool.root.1
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas      1061 Nov 24 17:16 memory_monitor_summary.json
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas   1516227 Nov 24 17:16 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas   1933310 Nov 24 17:16 log.47556137._007606.job.log.tgz.1
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas      8657 Nov 24 17:16 heartbeat.json
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas        95 Nov 24 17:17 pilot_heartbeat.json
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:17 boinc_mmap_file
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:17 wrapper_checkpoint.txt
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas      4817 Nov 24 17:17 pilotlog.txt
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas   5663484 Nov 24 17:17 log.47556137._007606.job.log.1
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas       353 Nov 24 17:17 output.list
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:17 runtime_log
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas   7618560 Nov 24 17:17 result.tar.gz
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas       668 Nov 24 17:17 TwkKDmVNQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuZIKDmXo5gmm.diag
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 17:17 runtime_log.err
[2025-11-24 17:17:38] -rw-r--r-- 1 boincer umatlas     21269 Nov 24 17:17 stderr.txt
[2025-11-24 17:17:38] HITS file was successfully produced:
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas 924201640 Nov 24 17:16 shared/HITS.pool.root.1
[2025-11-24 17:17:38]  *** Contents of shared directory: ***
[2025-11-24 17:17:38] total 1307756
[2025-11-24 17:17:38] -rw-r--r-- 2 boincer umatlas 406703499 Nov 24 05:48 ATLAS.root_0
[2025-11-24 17:17:38] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 05:48 start_atlas.sh
[2025-11-24 17:17:38] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 05:48 input.tar.gz
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas 924201640 Nov 24 17:16 HITS.pool.root.1
[2025-11-24 17:17:38] -rw------- 1 boincer umatlas   7618560 Nov 24 17:17 result.tar.gz
17:17:39 (29799): run_atlas exited; CPU time 319606.230654
17:17:39 (29799): called boinc_finish(0)

</stderr_txt>
]]>

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