Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:18:26 (5190): wrapper (7.7.26015): starting
06:18:26 (5190): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 06:18:26] Arguments: --nthreads 12
[2025-11-24 06:18:26] Threads: 12
[2025-11-24 06:18:26] Checking for CVMFS
[2025-11-24 06:18:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 06:18:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 06:18:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 06:18:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 06:18:27] 2.11.2.0 3035 284686 95652 153243 0 56 14933059 20275200 1 130560 3 127798620 99.968 16998478 14219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 06:18:27] CVMFS is ok
[2025-11-24 06:18:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 06:18:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 06:18:27] Further information can be found at the LHC@home message board.
[2025-11-24 06:18:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 06:18:27] Checking for apptainer binary...
[2025-11-24 06:18:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 06:18:27] Running /usr/bin/apptainer --version
[2025-11-24 06:18:27] apptainer version 1.3.2-1.el7
[2025-11-24 06:18:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 06:18:28] c-205-31.aglt2.org
[2025-11-24 06:18:28] apptainer works
[2025-11-24 06:18:28] Set ATHENA_PROC_NUMBER=12
[2025-11-24 06:18:28] Set ATHENA_CORE_NUMBER=12
[2025-11-24 06:18:28] Starting ATLAS job with PandaID=6895362268
[2025-11-24 06:18:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 13:37:45]  *** The last 200 lines of the pilot log: ***
[2025-11-24 13:37:45] 2025-11-24 18:37:10,035 | INFO     | time since job start (26306s) is within the limit (172800.0s)
[2025-11-24 13:37:45] 2025-11-24 18:37:11,153 | INFO     | monitor loop #1973: job 0:6895362268 is in state 'finished'
[2025-11-24 13:37:45] 2025-11-24 18:37:11,153 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,041 | INFO     | time since job start (26308s) is within the limit (172800.0s)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,422 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 13:37:45] 2025-11-24 18:37:12,426 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-24 13:37:45] 2025-11-24 18:37:12,428 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895362268/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,428 | INFO     | extracted standard info from prmon json
[2025-11-24 13:37:45] 2025-11-24 18:37:12,428 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 13:37:45] 2025-11-24 18:37:12,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 13:37:45] 2025-11-24 18:37:12,435 | INFO     | fitting pss+swap vs Time
[2025-11-24 13:37:45] 2025-11-24 18:37:12,436 | INFO     | sum of square deviations: 24825986739.786522
[2025-11-24 13:37:45] 2025-11-24 18:37:12,440 | INFO     | sum of deviations: 373171266732.9352
[2025-11-24 13:37:45] 2025-11-24 18:37:12,440 | INFO     | mean x: 1763996269.2111368
[2025-11-24 13:37:45] 2025-11-24 18:37:12,440 | INFO     | mean y: 3450863.8468677495
[2025-11-24 13:37:45] 2025-11-24 18:37:12,440 | INFO     | intersect: -26512019767.527206
[2025-11-24 13:37:45] 2025-11-24 18:37:12,441 | INFO     | chi2: 5.352147226423477
[2025-11-24 13:37:45] 2025-11-24 18:37:12,442 | INFO     | sum of square deviations: 23971979877.061043
[2025-11-24 13:37:45] 2025-11-24 18:37:12,445 | INFO     | sum of deviations: 531641558506.0659
[2025-11-24 13:37:45] 2025-11-24 18:37:12,446 | INFO     | mean x: 1763996116.713615
[2025-11-24 13:37:45] 2025-11-24 18:37:12,446 | INFO     | mean y: 3479131.2300469484
[2025-11-24 13:37:45] 2025-11-24 18:37:12,446 | INFO     | intersect: -39117763648.79059
[2025-11-24 13:37:45] 2025-11-24 18:37:12,446 | INFO     | chi2: 2.552157580243483
[2025-11-24 13:37:45] 2025-11-24 18:37:12,446 | INFO     | current chi2=2.552157580243483 (change=52.3152583014997 %)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,447 | INFO     | sum of square deviations: 23137761596.760017
[2025-11-24 13:37:45] 2025-11-24 18:37:12,451 | INFO     | sum of deviations: 557928789721.8741
[2025-11-24 13:37:45] 2025-11-24 18:37:12,451 | INFO     | mean x: 1763995964.2137768
[2025-11-24 13:37:45] 2025-11-24 18:37:12,451 | INFO     | mean y: 3483905.7458432303
[2025-11-24 13:37:45] 2025-11-24 18:37:12,451 | INFO     | intersect: -42532356446.49802
[2025-11-24 13:37:45] 2025-11-24 18:37:12,452 | INFO     | chi2: 2.333083606358118
[2025-11-24 13:37:45] 2025-11-24 18:37:12,452 | INFO     | current chi2=2.333083606358118 (change=8.583873330598356 %)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,452 | INFO     | right removable region: 420
[2025-11-24 13:37:45] 2025-11-24 18:37:12,452 | INFO     | sum of square deviations: 23971924367.061035
[2025-11-24 13:37:45] 2025-11-24 18:37:12,456 | INFO     | sum of deviations: 239532027406.76053
[2025-11-24 13:37:45] 2025-11-24 18:37:12,456 | INFO     | mean x: 1763996421.713615
[2025-11-24 13:37:45] 2025-11-24 18:37:12,456 | INFO     | mean y: 3474642.1619718308
[2025-11-24 13:37:45] 2025-11-24 18:37:12,456 | INFO     | intersect: -17622713091.515408
[2025-11-24 13:37:45] 2025-11-24 18:37:12,457 | INFO     | chi2: 3.1626064418168305
[2025-11-24 13:37:45] 2025-11-24 18:37:12,457 | INFO     | current chi2=3.1626064418168305 (change=40.90957688527165 %)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,458 | INFO     | sum of square deviations: 23137702304.760006
[2025-11-24 13:37:45] 2025-11-24 18:37:12,461 | INFO     | sum of deviations: 205966635171.56744
[2025-11-24 13:37:45] 2025-11-24 18:37:12,461 | INFO     | mean x: 1763996574.2137768
[2025-11-24 13:37:45] 2025-11-24 18:37:12,462 | INFO     | mean y: 3480771.3159144893
[2025-11-24 13:37:45] 2025-11-24 18:37:12,462 | INFO     | intersect: -15699220994.807114
[2025-11-24 13:37:45] 2025-11-24 18:37:12,462 | INFO     | chi2: 3.105155296882382
[2025-11-24 13:37:45] 2025-11-24 18:37:12,462 | INFO     | current chi2=3.105155296882382 (change=1.8165758525883562 %)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,462 | INFO     | left removable region: 20
[2025-11-24 13:37:45] 2025-11-24 18:37:12,463 | INFO     | sum of square deviations: 19845107010.63996
[2025-11-24 13:37:45] 2025-11-24 18:37:12,467 | INFO     | sum of deviations: 347046679392.2
[2025-11-24 13:37:45] 2025-11-24 18:37:12,467 | INFO     | mean x: 1763996543.72
[2025-11-24 13:37:45] 2025-11-24 18:37:12,467 | INFO     | mean y: 3523156.975
[2025-11-24 13:37:45] 2025-11-24 18:37:12,467 | INFO     | intersect: -30844843779.4753
[2025-11-24 13:37:45] 2025-11-24 18:37:12,467 | INFO     | chi2: 0.03830659621842505
[2025-11-24 13:37:45] 2025-11-24 18:37:12,468 | INFO     | current memory leak: 17.49 B/s (using 400 data points, chi2=0.04)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,468 | INFO     | could have reported an average CPU frequency of 2407 MHz (18 samples)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,468 | INFO     | ..............................
[2025-11-24 13:37:45] 2025-11-24 18:37:12,468 | INFO     | . Timing measurements:
[2025-11-24 13:37:45] 2025-11-24 18:37:12,468 | INFO     | . get job = 0 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | . initial setup = 2 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | . payload setup = 8 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | . stage-in = 0 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | . payload execution = 26267 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | . stage-out = 3 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | . log creation = 0 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,469 | INFO     | ..............................
[2025-11-24 13:37:45] 2025-11-24 18:37:12,568 | INFO     | 
[2025-11-24 13:37:45] 2025-11-24 18:37:12,569 | INFO     | job summary report
[2025-11-24 13:37:45] 2025-11-24 18:37:12,569 | INFO     | --------------------------------------------------
[2025-11-24 13:37:45] 2025-11-24 18:37:12,569 | INFO     | PanDA job id: 6895362268
[2025-11-24 13:37:45] 2025-11-24 18:37:12,569 | INFO     | task id: 47556149
[2025-11-24 13:37:45] 2025-11-24 18:37:12,569 | INFO     | errors: (none)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,570 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 13:37:45] 2025-11-24 18:37:12,570 | INFO     | pilot state: finished 
[2025-11-24 13:37:45] 2025-11-24 18:37:12,570 | INFO     | transexitcode: 0
[2025-11-24 13:37:45] 2025-11-24 18:37:12,570 | INFO     | exeerrorcode: 0
[2025-11-24 13:37:45] 2025-11-24 18:37:12,570 | INFO     | exeerrordiag: 
[2025-11-24 13:37:45] 2025-11-24 18:37:12,570 | INFO     | exitcode: 0
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | exitmsg: OK
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | cpuconsumptiontime: 302276 s
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | nevents: 1000
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | neventsw: 0
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | pid: 15300
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | pgrp: 15300
[2025-11-24 13:37:45] 2025-11-24 18:37:12,571 | INFO     | corecount: 12
[2025-11-24 13:37:45] 2025-11-24 18:37:12,572 | INFO     | event service: False
[2025-11-24 13:37:45] 2025-11-24 18:37:12,572 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 26280: 2336558, 26283: 2346343, 26286: 2346527, 26293: 2346773}
[2025-11-24 13:37:45] 2025-11-24 18:37:12,572 | INFO     | --------------------------------------------------
[2025-11-24 13:37:45] 2025-11-24 18:37:12,572 | INFO     | 
[2025-11-24 13:37:45] 2025-11-24 18:37:12,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 13:37:45] 2025-11-24 18:37:12,596 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,596 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,596 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,597 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 13:37:45] 2025-11-24 18:37:12,612 | INFO     | job 6895362268 has completed (purged errors)
[2025-11-24 13:37:45] 2025-11-24 18:37:12,612 | INFO     | overall cleanup function is called
[2025-11-24 13:37:45] 2025-11-24 18:37:13,627 | INFO     | --- collectZombieJob: --- 10, [15300]
[2025-11-24 13:37:45] 2025-11-24 18:37:13,627 | INFO     | zombie collector waiting for pid 15300
[2025-11-24 13:37:45] 2025-11-24 18:37:13,628 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 13:37:45] 2025-11-24 18:37:13,628 | INFO     | collected zombie processes
[2025-11-24 13:37:45] 2025-11-24 18:37:13,628 | INFO     | will attempt to kill all subprocesses of pid=15300
[2025-11-24 13:37:45] 2025-11-24 18:37:13,720 | INFO     | process IDs to be killed: [15300] (in reverse order)
[2025-11-24 13:37:45] 2025-11-24 18:37:13,775 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 13:37:45] 2025-11-24 18:37:13,775 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 13:37:45] 2025-11-24 18:37:13,779 | INFO     | did not find any defunct processes belonging to 15300
[2025-11-24 13:37:45] 2025-11-24 18:37:13,783 | INFO     | did not find any defunct processes belonging to 15300
[2025-11-24 13:37:45] 2025-11-24 18:37:13,785 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 13:37:45] 2025-11-24 18:37:13,785 | INFO     | ready for new job
[2025-11-24 13:37:45] 2025-11-24 18:37:13,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 13:37:45] 2025-11-24 18:37:13,788 | INFO     | ***************************************
[2025-11-24 13:37:45] 2025-11-24 18:37:13,788 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 13:37:45] 2025-11-24 18:37:13,788 | INFO     | ***************************************
[2025-11-24 13:37:45] 2025-11-24 18:37:13,788 | INFO     | 
[2025-11-24 13:37:45] 2025-11-24 18:37:13,789 | INFO     | architecture information:
[2025-11-24 13:37:45] 2025-11-24 18:37:13,790 | INFO     | executing command: cat /etc/os-release
[2025-11-24 13:37:45] 2025-11-24 18:37:13,807 | INFO     | cat /etc/os-release:
[2025-11-24 13:37:45] NAME="CentOS Linux"
[2025-11-24 13:37:45] VERSION="7 (Core)"
[2025-11-24 13:37:45] ID="centos"
[2025-11-24 13:37:45] ID_LIKE="rhel fedora"
[2025-11-24 13:37:45] VERSION_ID="7"
[2025-11-24 13:37:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 13:37:45] ANSI_COLOR="0;31"
[2025-11-24 13:37:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 13:37:45] HOME_URL="https://www.centos.org/"
[2025-11-24 13:37:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 13:37:45] 
[2025-11-24 13:37:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 13:37:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 13:37:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 13:37:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 13:37:45] 
[2025-11-24 13:37:45] 2025-11-24 18:37:13,807 | INFO     | ***************************************
[2025-11-24 13:37:45] 2025-11-24 18:37:14,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 13:37:45] 2025-11-24 18:37:14,327 | INFO     | sufficient remaining disk space (28233957376 B)
[2025-11-24 13:37:45] 2025-11-24 18:37:14,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 13:37:45] 2025-11-24 18:37:14,328 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 13:37:45] 2025-11-24 18:37:14,328 | INFO     | update_server=False
[2025-11-24 13:37:45] 2025-11-24 18:37:14,328 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 13:37:45] 2025-11-24 18:37:14,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:37:45] 2025-11-24 18:37:14,329 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 13:37:45] 2025-11-24 18:37:14,473 | INFO     | all job control threads have been joined
[2025-11-24 13:37:45] 2025-11-24 18:37:14,661 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 13:37:45] 2025-11-24 18:37:14,661 | INFO     | aborting loop
[2025-11-24 13:37:45] 2025-11-24 18:37:14,672 | INFO     | all payload control threads have been joined
[2025-11-24 13:37:45] 2025-11-24 18:37:14,883 | INFO     | all data control threads have been joined
[2025-11-24 13:37:45] 2025-11-24 18:37:15,333 | INFO     | [job] retrieve thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,334 | INFO     | [job] queue monitor thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,479 | INFO     | [job] control thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,571 | INFO     | [payload] failed_post thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,628 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,662 | INFO     | [job] job monitor thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,678 | INFO     | [payload] control thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:15,888 | INFO     | [data] control thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,076 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,143 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,314 | INFO     | [job] validate thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,334 | INFO     | [data] copytool_out thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,479 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,573 | INFO     | [data] copytool_in thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,741 | INFO     | [payload] validate_post thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:16,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 13:37:45] 2025-11-24 18:37:20,896 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 13:37:45] 2025-11-24 18:37:26,028 | INFO     | [monitor] cgroup control has ended
[2025-11-24 13:37:45] 2025-11-24 18:37:27,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800692025152)>', '<ExcThread(monitor, started 139799868450560)>']
[2025-11-24 13:37:45] 2025-11-24 18:37:32,720 | INFO     | all workflow threads have been joined
[2025-11-24 13:37:45] 2025-11-24 18:37:32,720 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 13:37:45] 2025-11-24 18:37:32,720 | INFO     | traces error code: 0
[2025-11-24 13:37:45] 2025-11-24 18:37:32,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 13:37:45] 2025-11-24 18:37:45,242 | INFO     | PID=8880 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 13:37:45] 2025-11-24 18:37:45,243 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 13:37:45] 2025-11-24 18:37:45,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 13:37:45] 2025-11-24 18:37:45,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 13:37:45] 2025-11-24 18:37:45,243 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 13:37:45] 2025-11-24 18:37:45,243 | INFO     | [monitor] control thread has ended
[2025-11-24 13:37:45] 2025-11-24 18:37:45,342 [wrapper] ==== pilot stdout END ====
[2025-11-24 13:37:45] 2025-11-24 18:37:45,346 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 13:37:45] 2025-11-24 18:37:45,349 [wrapper] pilotpid: 8880
[2025-11-24 13:37:45] 2025-11-24 18:37:45,353 [wrapper] Pilot exit status: 0
[2025-11-24 13:37:45] 2025-11-24 18:37:45,366 [wrapper] pandaids: 6895362268
[2025-11-24 13:37:45] 2025-11-24 18:37:45,405 [wrapper] cleanup supervisor_pilot 12419 8881
[2025-11-24 13:37:45] 2025-11-24 18:37:45,409 [wrapper] Test setup, not cleaning
[2025-11-24 13:37:45] 2025-11-24 18:37:45,413 [wrapper] apfmon messages muted
[2025-11-24 13:37:45] 2025-11-24 18:37:45,417 [wrapper] ==== wrapper stdout END ====
[2025-11-24 13:37:45] 2025-11-24 18:37:45,421 [wrapper] ==== wrapper stderr END ====
[2025-11-24 13:37:45]  *** Error codes and diagnostics ***
[2025-11-24 13:37:45]     "exeErrorCode": 0,
[2025-11-24 13:37:45]     "exeErrorDiag": "",
[2025-11-24 13:37:45]     "pilotErrorCode": 0,
[2025-11-24 13:37:45]     "pilotErrorDiag": "",
[2025-11-24 13:37:45]  *** Listing of results directory ***
[2025-11-24 13:37:45] total 1327660
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 09:56 pilot3.tar.gz
[2025-11-24 13:37:45] -rwx------ 1 boincer umatlas     36292 Nov 23 09:57 runpilot2-wrapper.sh
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 09:57 queuedata.json
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas       100 Nov 24 06:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 13:37:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 06:18 run_atlas
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas       105 Nov 24 06:18 job.xml
[2025-11-24 13:37:45] -rw-r--r-- 2 boincer umatlas 409406051 Nov 24 06:18 EVNT.47483658._001170.pool.root.1
[2025-11-24 13:37:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 06:18 start_atlas.sh
[2025-11-24 13:37:45] drwxrwx--x 2 boincer umatlas      4096 Nov 24 06:18 shared
[2025-11-24 13:37:45] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 06:18 input.tar.gz
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas         0 Nov 24 06:18 boinc_lockfile
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 06:18 pandaJob.out
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas        57 Nov 24 06:18 setup.sh.local
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas    989824 Nov 24 06:18 agis_schedconf.cvmfs.json
[2025-11-24 13:37:45] drwx------ 5 boincer umatlas      4096 Nov 24 06:18 pilot3
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas       532 Nov 24 13:28 boinc_task_state.xml
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 13:30 init_data.xml
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas 934487045 Nov 24 13:36 HITS.47556149._001563.pool.root.1
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas        95 Nov 24 13:36 pilot_heartbeat.json
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas      1060 Nov 24 13:36 memory_monitor_summary.json
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas   1516227 Nov 24 13:37 agis_ddmendpoints.agis.ALL.json
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas   2179305 Nov 24 13:37 log.47556149._001563.job.log.tgz.1
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas      8680 Nov 24 13:37 heartbeat.json
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 13:37 boinc_mmap_file
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas        29 Nov 24 13:37 wrapper_checkpoint.txt
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas       744 Nov 24 13:37 pilotlog.txt
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas   3679631 Nov 24 13:37 log.47556149._001563.job.log.1
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas       353 Nov 24 13:37 output.list
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas       620 Nov 24 13:37 runtime_log
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas   5877760 Nov 24 13:37 result.tar.gz
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 13:37 runtime_log.err
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas       670 Nov 24 13:37 7N1KDmwhQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvaIKDmOaUy4m.diag
[2025-11-24 13:37:45] -rw-r--r-- 1 boincer umatlas     21317 Nov 24 13:37 stderr.txt
[2025-11-24 13:37:45] HITS file was successfully produced:
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas 934487045 Nov 24 13:36 shared/HITS.pool.root.1
[2025-11-24 13:37:45]  *** Contents of shared directory: ***
[2025-11-24 13:37:45] total 1318740
[2025-11-24 13:37:45] -rw-r--r-- 2 boincer umatlas 409406051 Nov 24 06:18 ATLAS.root_0
[2025-11-24 13:37:45] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 06:18 start_atlas.sh
[2025-11-24 13:37:45] -rw-r--r-- 2 boincer umatlas    590103 Nov 24 06:18 input.tar.gz
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas 934487045 Nov 24 13:36 HITS.pool.root.1
[2025-11-24 13:37:45] -rw------- 1 boincer umatlas   5877760 Nov 24 13:37 result.tar.gz
13:37:46 (5190): run_atlas exited; CPU time 295297.923454
13:37:46 (5190): called boinc_finish(0)

</stderr_txt>
]]>

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