Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:34:02 (9002): wrapper (7.7.26015): starting
23:34:02 (9002): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 23:34:02] Arguments: --nthreads 8
[2025-11-26 23:34:02] Threads: 8
[2025-11-26 23:34:02] Checking for CVMFS
[2025-11-26 23:34:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 23:34:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 23:34:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 23:34:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 23:34:04] 2.11.2.0 17816 190957 136244 153337 0 84 20855056 25165825 1288 130560 13 66812086 99.876 35744199 2308 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-26 23:34:04] CVMFS is ok
[2025-11-26 23:34:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 23:34:05] Checking for apptainer binary...
[2025-11-26 23:34:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 23:34:05] Running /usr/bin/apptainer --version
[2025-11-26 23:34:05] apptainer version 1.3.2-1.el7
[2025-11-26 23:34:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 23:34:39] cg-vwn410.simple-grid.lan
[2025-11-26 23:34:39] apptainer works
[2025-11-26 23:34:39] Set ATHENA_PROC_NUMBER=8
[2025-11-26 23:34:39] Set ATHENA_CORE_NUMBER=8
[2025-11-26 23:34:39] Starting ATLAS job with PandaID=6895361847
[2025-11-26 23:34:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:21:02]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:21:02] 2025-11-27 22:20:07,874 | INFO     | monitor loop #5732: job 0:6895361847 is in state 'finished'
[2025-11-27 23:21:02] 2025-11-27 22:20:07,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:21:02] 2025-11-27 22:20:09,623 | INFO     | time since job start (85305s) is within the limit (172800.0s)
[2025-11-27 23:21:02] 2025-11-27 22:20:10,379 | INFO     | monitor loop #5733: job 0:6895361847 is in state 'finished'
[2025-11-27 23:21:02] 2025-11-27 22:20:10,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:21:02] 2025-11-27 22:20:11,629 | INFO     | time since job start (85307s) is within the limit (172800.0s)
[2025-11-27 23:21:02] 2025-11-27 22:20:12,683 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:21:02] 2025-11-27 22:20:12,684 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-27 23:21:02] 2025-11-27 22:20:12,686 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6895361847/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:21:02] 2025-11-27 22:20:12,687 | INFO     | extracted standard info from prmon json
[2025-11-27 23:21:02] 2025-11-27 22:20:12,687 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:21:02] 2025-11-27 22:20:12,687 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:21:02] 2025-11-27 22:20:12,711 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:21:02] 2025-11-27 22:20:12,713 | INFO     | sum of square deviations: 830968084564.6449
[2025-11-27 23:21:02] 2025-11-27 22:20:12,772 | INFO     | sum of deviations: 3278203942098.8286
[2025-11-27 23:21:02] 2025-11-27 22:20:12,772 | INFO     | mean x: 1764239538.0943124
[2025-11-27 23:21:02] 2025-11-27 22:20:12,772 | INFO     | mean y: 2865581.634989201
[2025-11-27 23:21:02] 2025-11-27 22:20:12,772 | INFO     | intersect: -6957133383.4485655
[2025-11-27 23:21:02] 2025-11-27 22:20:12,774 | INFO     | chi2: 16.208158777039365
[2025-11-27 23:21:02] 2025-11-27 22:20:12,776 | INFO     | sum of square deviations: 822027059578.636
[2025-11-27 23:21:02] 2025-11-27 22:20:12,842 | INFO     | sum of deviations: 3780295115701.173
[2025-11-27 23:21:02] 2025-11-27 22:20:12,842 | INFO     | mean x: 1764239385.598266
[2025-11-27 23:21:02] 2025-11-27 22:20:12,842 | INFO     | mean y: 2874145.575867052
[2025-11-27 23:21:02] 2025-11-27 22:20:12,842 | INFO     | intersect: -8110417813.113926
[2025-11-27 23:21:02] 2025-11-27 22:20:12,844 | INFO     | chi2: 12.553086841862752
[2025-11-27 23:21:02] 2025-11-27 22:20:12,844 | INFO     | current chi2=12.553086841862752 (change=22.550815212610228 %)
[2025-11-27 23:21:02] 2025-11-27 22:20:12,844 | INFO     | right removable region: 1383
[2025-11-27 23:21:02] 2025-11-27 22:20:12,846 | INFO     | sum of square deviations: 822026132378.6357
[2025-11-27 23:21:02] 2025-11-27 22:20:12,892 | INFO     | monitor loop #5734: job 0:6895361847 is in state 'finished'
[2025-11-27 23:21:02] 2025-11-27 22:20:12,892 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:21:02] 2025-11-27 22:20:12,925 | INFO     | sum of deviations: 2705256325453.871
[2025-11-27 23:21:02] 2025-11-27 22:20:12,926 | INFO     | mean x: 1764239690.598266
[2025-11-27 23:21:02] 2025-11-27 22:20:12,926 | INFO     | mean y: 2875351.9458092484
[2025-11-27 23:21:02] 2025-11-27 22:20:12,926 | INFO     | intersect: -5803169486.065938
[2025-11-27 23:21:02] 2025-11-27 22:20:12,928 | INFO     | chi2: 11.753229132806851
[2025-11-27 23:21:02] 2025-11-27 22:20:12,928 | INFO     | current chi2=11.753229132806851 (change=27.485723119540335 %)
[2025-11-27 23:21:02] 2025-11-27 22:20:12,930 | INFO     | sum of square deviations: 813148553492.5822
[2025-11-27 23:21:02] 2025-11-27 22:20:12,990 | INFO     | sum of deviations: 2261822010707.623
[2025-11-27 23:21:02] 2025-11-27 22:20:12,990 | INFO     | mean x: 1764239843.102248
[2025-11-27 23:21:02] 2025-11-27 22:20:12,990 | INFO     | mean y: 2882966.60551124
[2025-11-27 23:21:02] 2025-11-27 22:20:12,991 | INFO     | intersect: -4904457140.139731
[2025-11-27 23:21:02] 2025-11-27 22:20:12,992 | INFO     | chi2: 9.12777636696801
[2025-11-27 23:21:02] 2025-11-27 22:20:12,992 | INFO     | current chi2=9.12777636696801 (change=22.338139894766453 %)
[2025-11-27 23:21:02] 2025-11-27 22:20:12,992 | INFO     | left removable region: 20
[2025-11-27 23:21:02] 2025-11-27 22:20:12,994 | INFO     | sum of square deviations: 785172047721.9297
[2025-11-27 23:21:02] 2025-11-27 22:20:13,055 | INFO     | sum of deviations: 2673702253819.8535
[2025-11-27 23:21:02] 2025-11-27 22:20:13,055 | INFO     | mean x: 1764239965.108584
[2025-11-27 23:21:02] 2025-11-27 22:20:13,055 | INFO     | mean y: 2896351.7307410124
[2025-11-27 23:21:02] 2025-11-27 22:20:13,055 | INFO     | intersect: -6004770865.506257
[2025-11-27 23:21:02] 2025-11-27 22:20:13,057 | INFO     | chi2: 4.728356283397571
[2025-11-27 23:21:02] 2025-11-27 22:20:13,057 | INFO     | current memory leak: 3.41 B/s (using 1363 data points, chi2=4.73)
[2025-11-27 23:21:02] 2025-11-27 22:20:13,058 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-27 23:21:02] 2025-11-27 22:20:13,058 | INFO     | ..............................
[2025-11-27 23:21:02] 2025-11-27 22:20:13,059 | INFO     | . Timing measurements:
[2025-11-27 23:21:02] 2025-11-27 22:20:13,059 | INFO     | . get job = 0 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | . initial setup = 4 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | . payload setup = 135 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | . stage-in = 0 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | . payload execution = 84882 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | . stage-out = 4 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | . log creation = 1 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,061 | INFO     | ..............................
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | 
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | job summary report
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | --------------------------------------------------
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | PanDA job id: 6895361847
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | task id: 47556137
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | errors: (none)
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:21:02] 2025-11-27 22:20:13,200 | INFO     | pilot state: finished 
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | transexitcode: 0
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | exeerrorcode: 0
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | exeerrordiag: 
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | exitcode: 0
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | exitmsg: OK
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | cpuconsumptiontime: 322077 s
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | nevents: 1000
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | neventsw: 0
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | pid: 19397
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | pgrp: 19397
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | corecount: 8
[2025-11-27 23:21:02] 2025-11-27 22:20:13,201 | INFO     | event service: False
[2025-11-27 23:21:02] 2025-11-27 22:20:13,202 | INFO     | sizes: {0: 2283481, 1: 2284337, 2: 2284337, 13: 2284365, 23: 2284421, 34: 2284449, 45: 2284605, 56: 2284633, 66: 2284661, 77: 2284689, 88: 2284745, 96: 2285315, 98
[2025-11-27 23:21:02] 2025-11-27 22:20:13,202 | INFO     | --------------------------------------------------
[2025-11-27 23:21:02] 2025-11-27 22:20:13,202 | INFO     | 
[2025-11-27 23:21:02] 2025-11-27 22:20:13,202 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-27 23:21:02] 2025-11-27 22:20:13,637 | INFO     | time since job start (85309s) is within the limit (172800.0s)
[2025-11-27 23:21:02] 2025-11-27 22:20:13,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,644 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,644 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,645 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,646 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:21:02] 2025-11-27 22:20:13,646 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,646 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:21:02] 2025-11-27 22:20:13,646 | INFO     | job 6895361847 has completed (purged errors)
[2025-11-27 23:21:02] 2025-11-27 22:20:13,647 | INFO     | overall cleanup function is called
[2025-11-27 23:21:02] 2025-11-27 22:20:14,663 | INFO     | --- collectZombieJob: --- 10, [19397]
[2025-11-27 23:21:02] 2025-11-27 22:20:14,663 | INFO     | zombie collector waiting for pid 19397
[2025-11-27 23:21:02] 2025-11-27 22:20:14,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:21:02] 2025-11-27 22:20:14,664 | INFO     | collected zombie processes
[2025-11-27 23:21:02] 2025-11-27 22:20:14,664 | INFO     | will attempt to kill all subprocesses of pid=19397
[2025-11-27 23:21:02] 2025-11-27 22:20:14,785 | INFO     | process IDs to be killed: [19397] (in reverse order)
[2025-11-27 23:21:02] 2025-11-27 22:20:15,473 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:21:02] 2025-11-27 22:20:15,473 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:21:02] 2025-11-27 22:20:15,480 | INFO     | did not find any defunct processes belonging to 19397
[2025-11-27 23:21:02] 2025-11-27 22:20:15,483 | INFO     | did not find any defunct processes belonging to 19397
[2025-11-27 23:21:02] 2025-11-27 22:20:15,543 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:21:02] 2025-11-27 22:20:15,543 | INFO     | ready for new job
[2025-11-27 23:21:02] 2025-11-27 22:20:15,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:21:02] 2025-11-27 22:20:15,548 | INFO     | ***************************************
[2025-11-27 23:21:02] 2025-11-27 22:20:15,548 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:21:02] 2025-11-27 22:20:15,548 | INFO     | ***************************************
[2025-11-27 23:21:02] 2025-11-27 22:20:15,549 | INFO     | 
[2025-11-27 23:21:02] 2025-11-27 22:20:15,549 | INFO     | pilot is running in a VM
[2025-11-27 23:21:02] 2025-11-27 22:20:15,549 | INFO     | architecture information:
[2025-11-27 23:21:02] 2025-11-27 22:20:15,559 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:21:02] 2025-11-27 22:20:15,710 | INFO     | cat /etc/os-release:
[2025-11-27 23:21:02] NAME="CentOS Linux"
[2025-11-27 23:21:02] VERSION="7 (Core)"
[2025-11-27 23:21:02] ID="centos"
[2025-11-27 23:21:02] ID_LIKE="rhel fedora"
[2025-11-27 23:21:02] VERSION_ID="7"
[2025-11-27 23:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:21:02] ANSI_COLOR="0;31"
[2025-11-27 23:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:21:02] HOME_URL="https://www.centos.org/"
[2025-11-27 23:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:21:02] 
[2025-11-27 23:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:21:02] 
[2025-11-27 23:21:02] 2025-11-27 22:20:15,711 | INFO     | ***************************************
[2025-11-27 23:21:02] 2025-11-27 22:20:16,214 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-27 23:21:02] 2025-11-27 22:20:16,472 | INFO     | sufficient remaining disk space (495657680896 B)
[2025-11-27 23:21:02] 2025-11-27 22:20:16,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:21:02] 2025-11-27 22:20:16,472 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:21:02] 2025-11-27 22:20:16,472 | INFO     | update_server=False
[2025-11-27 23:21:02] 2025-11-27 22:20:16,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:21:02] 2025-11-27 22:20:16,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:21:02] 2025-11-27 22:20:16,473 | INFO     | aborting loop
[2025-11-27 23:21:02] 2025-11-27 22:20:16,474 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:21:02] 2025-11-27 22:20:16,541 | INFO     | all data control threads have been joined
[2025-11-27 23:21:02] 2025-11-27 22:20:17,347 | INFO     | all payload control threads have been joined
[2025-11-27 23:21:02] 2025-11-27 22:20:17,478 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:17,479 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:17,481 | INFO     | [job] validate thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:17,547 | INFO     | [data] control thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:17,885 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:17,967 | INFO     | all job control threads have been joined
[2025-11-27 23:21:02] 2025-11-27 22:20:18,115 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:21:02] 2025-11-27 22:20:18,299 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,353 | INFO     | [payload] control thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,481 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,689 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,823 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,844 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,848 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:18,973 | INFO     | [job] control thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:19,219 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:19,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:21:02] 2025-11-27 22:20:23,505 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:21:02] 2025-11-27 22:20:46,794 | INFO     | PID=12784 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:21:02] 2025-11-27 22:20:46,794 | INFO     | .. there are 9 such processes running
[2025-11-27 23:21:02] 2025-11-27 22:20:46,796 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:21:02] 2025-11-27 22:20:46,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:21:02] 2025-11-27 22:20:46,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:21:02] 2025-11-27 22:20:51,993 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:21:02] 2025-11-27 22:20:52,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139928584558400)>', '<ExcThread(monitor, started 139927878625024)>']
[2025-11-27 23:21:02] 2025-11-27 22:20:53,838 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:21:02] 2025-11-27 22:20:53,838 | INFO     | [monitor] control thread has ended
[2025-11-27 23:21:02] 2025-11-27 22:20:57,952 | INFO     | all workflow threads have been joined
[2025-11-27 23:21:02] 2025-11-27 22:20:57,952 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:21:02] 2025-11-27 22:20:57,952 | INFO     | traces error code: 0
[2025-11-27 23:21:02] 2025-11-27 22:20:57,953 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:21:02] 2025-11-27 22:20:58,276 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:21:02] 2025-11-27 22:20:58,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:21:02] 2025-11-27 22:20:58,533 [wrapper] pilotpid: 12784
[2025-11-27 23:21:02] 2025-11-27 22:20:58,663 [wrapper] Pilot exit status: 0
[2025-11-27 23:21:02] 2025-11-27 22:20:59,062 [wrapper] pandaids: 6895361847
[2025-11-27 23:21:02] 2025-11-27 22:20:59,808 [wrapper] cleanup supervisor_pilot 24807 12785
[2025-11-27 23:21:02] 2025-11-27 22:20:59,876 [wrapper] Test setup, not cleaning
[2025-11-27 23:21:02] 2025-11-27 22:20:59,961 [wrapper] apfmon messages muted
[2025-11-27 23:21:02] 2025-11-27 22:21:00,057 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:21:02] 2025-11-27 22:21:00,179 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:21:02]  *** Error codes and diagnostics ***
[2025-11-27 23:21:02]     "exeErrorCode": 0,
[2025-11-27 23:21:02]     "exeErrorDiag": "",
[2025-11-27 23:21:02]     "pilotErrorCode": 0,
[2025-11-27 23:21:02]     "pilotErrorDiag": "",
[2025-11-27 23:21:02]  *** Listing of results directory ***
[2025-11-27 23:21:02] total 1342496
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc      5112 Nov 23 15:38 queuedata.json
[2025-11-27 23:21:02] -rwx------. 1 boinc boinc     36292 Nov 23 15:39 runpilot2-wrapper.sh
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc       100 Nov 26 23:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:21:02] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 23:34 run_atlas
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc       105 Nov 26 23:34 job.xml
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc      6392 Nov 26 23:34 init_data.xml
[2025-11-27 23:21:02] -rw-r--r--. 2 boinc boinc 409978290 Nov 26 23:34 EVNT.47483658._000767.pool.root.1
[2025-11-27 23:21:02] -rw-r--r--. 2 boinc boinc     15847 Nov 26 23:34 start_atlas.sh
[2025-11-27 23:21:02] drwxrwx--x. 2 boinc boinc        68 Nov 26 23:34 shared
[2025-11-27 23:21:02] -rw-r--r--. 2 boinc boinc    590102 Nov 26 23:34 input.tar.gz
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc         0 Nov 26 23:34 boinc_lockfile
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc      2783 Nov 26 23:34 pandaJob.out
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc    991546 Nov 26 23:38 agis_schedconf.cvmfs.json
[2025-11-27 23:21:02] drwx------. 5 boinc boinc      4096 Nov 26 23:38 pilot3
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc       533 Nov 27 23:01 boinc_task_state.xml
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc 933244597 Nov 27 23:17 HITS.47556137._007621.pool.root.1
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc      1027 Nov 27 23:18 memory_monitor_summary.json
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc   1516240 Nov 27 23:18 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc   2465082 Nov 27 23:18 log.47556137._007621.job.log.tgz.1
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc      8625 Nov 27 23:20 heartbeat.json
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc        95 Nov 27 23:20 pilot_heartbeat.json
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc      4884 Nov 27 23:20 pilotlog.txt
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc      8192 Nov 27 23:20 boinc_mmap_file
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc  11332495 Nov 27 23:21 log.47556137._007621.job.log.1
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc        29 Nov 27 23:21 wrapper_checkpoint.txt
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc       353 Nov 27 23:21 output.list
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc       620 Nov 27 23:21 runtime_log
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc  13813760 Nov 27 23:21 result.tar.gz
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc      8817 Nov 27 23:21 runtime_log.err
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc       662 Nov 27 23:21 NtGKDmcQQh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbyKKDmYC89bm.diag
[2025-11-27 23:21:02] -rw-r--r--. 1 boinc boinc     21217 Nov 27 23:21 stderr.txt
[2025-11-27 23:21:02] HITS file was successfully produced:
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc 933244597 Nov 27 23:17 shared/HITS.pool.root.1
[2025-11-27 23:21:02]  *** Contents of shared directory: ***
[2025-11-27 23:21:02] total 1325832
[2025-11-27 23:21:02] -rw-r--r--. 2 boinc boinc 409978290 Nov 26 23:34 ATLAS.root_0
[2025-11-27 23:21:02] -rw-r--r--. 2 boinc boinc     15847 Nov 26 23:34 start_atlas.sh
[2025-11-27 23:21:02] -rw-r--r--. 2 boinc boinc    590102 Nov 26 23:34 input.tar.gz
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc 933244597 Nov 27 23:17 HITS.pool.root.1
[2025-11-27 23:21:02] -rw-------. 1 boinc boinc  13813760 Nov 27 23:21 result.tar.gz
23:21:04 (9002): run_atlas exited; CPU time 322652.141594
23:21:04 (9002): called boinc_finish(0)

</stderr_txt>
]]>

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