Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:28:55 (1268531): wrapper (7.7.26015): starting
05:28:55 (1268531): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 05:28:55] Arguments: --nthreads 3
[2025-11-27 05:28:55] Threads: 3
[2025-11-27 05:28:55] Checking for CVMFS
[2025-11-27 05:28:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:28:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:28:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:28:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:28:55] 2.9.2.0 3836662 12226 96104 153347 1 81 34274935 36864000 0 130560 5 4552271 99.938 605477 514 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 05:28:55] CVMFS is ok
[2025-11-27 05:28:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:28:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:28:55] Further information can be found at the LHC@home message board.
[2025-11-27 05:28:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:28:55] Checking for apptainer binary...
[2025-11-27 05:28:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:28:55] Running /usr/bin/apptainer --version
[2025-11-27 05:28:55] apptainer version 1.4.1-1.1
[2025-11-27 05:28:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:28:55] thA327
[2025-11-27 05:28:55] apptainer works
[2025-11-27 05:28:55] Set ATHENA_PROC_NUMBER=3
[2025-11-27 05:28:55] Set ATHENA_CORE_NUMBER=3
[2025-11-27 05:28:55] Starting ATLAS job with PandaID=6895361901
[2025-11-27 05:28:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:39:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:39:56] 2025-11-27 12:39:27,198 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,519 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,702 | INFO     | [job] validate thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,724 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,753 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,777 | INFO     | [data] control thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,837 | INFO     | [job] control thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:27,848 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:28,151 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:28,624 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:30,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:39:56] 2025-11-27 12:39:34,565 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:39:56] 2025-11-27 12:39:34,951 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139687688513344)>', '<ExcThread(monitor, started 139687335278336)>']
[2025-11-27 13:39:56] 2025-11-27 12:39:39,953 | INFO     | all workflow threads have been joined
[2025-11-27 13:39:56] 2025-11-27 12:39:39,954 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:39:56] 2025-11-27 12:39:39,954 | INFO     | traces error code: 0
[2025-11-27 13:39:56] 2025-11-27 12:39:39,954 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:39:56] 2025-11-27 12:39:56,606 | INFO     | PID=1272255 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:39:56] 2025-11-27 12:39:56,606 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:39:56] 2025-11-27 12:39:56,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:39:56] 2025-11-27 12:39:56,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:39:56] 2025-11-27 12:39:56,606 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:39:56] 2025-11-27 12:39:56,607 | INFO     | [monitor] control thread has ended
[2025-11-27 13:39:56] 2025-11-27 12:39:56,652 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:39:56] 2025-11-27 12:39:56,654 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:39:56] 2025-11-27 12:39:56,656 [wrapper] pilotpid: 1272255
[2025-11-27 13:39:56] 2025-11-27 12:39:56,659 [wrapper] Pilot exit status: 0
[2025-11-27 13:39:56] 2025-11-27 12:39:56,666 [wrapper] pandaids: 6895361901
[2025-11-27 13:39:56] 2025-11-27 12:39:56,682 [wrapper] cleanup supervisor_pilot 1329208 1272256
[2025-11-27 13:39:56] 2025-11-27 12:39:56,684 [wrapper] Test setup, not cleaning
[2025-11-27 13:39:56] 2025-11-27 12:39:56,686 [wrapper] apfmon messages muted
[2025-11-27 13:39:56] 2025-11-27 12:39:56,689 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:39:56] 2025-11-27 12:39:56,691 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:39:56]  *** Error codes and diagnostics ***
[2025-11-27 13:39:56]     "exeErrorCode": 0,
[2025-11-27 13:39:56]     "exeErrorDiag": "",
[2025-11-27 13:39:56]     "pilotErrorCode": 0,
[2025-11-27 13:39:56]     "pilotErrorDiag": "",
[2025-11-27 13:39:56]  *** Listing of results directory ***
[2025-11-27 13:39:56] total 1316336
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-27 13:39:56] -rwx------ 1 boinc boinc     36292 Nov 23 15:45 runpilot2-wrapper.sh
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc      5112 Nov 23 15:45 queuedata.json
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc       100 Nov 27 05:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:39:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 05:28 run_atlas
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc       105 Nov 27 05:28 job.xml
[2025-11-27 13:39:56] -rw-r--r-- 2 boinc boinc 409837341 Nov 27 05:28 EVNT.47483658._000768.pool.root.1
[2025-11-27 13:39:56] -rw-r--r-- 2 boinc boinc    590103 Nov 27 05:28 input.tar.gz
[2025-11-27 13:39:56] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:28 start_atlas.sh
[2025-11-27 13:39:56] drwxrwx--x 2 boinc boinc      4096 Nov 27 05:28 shared
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:28 boinc_setup_complete
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc      6447 Nov 27 05:28 init_data.xml
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc         0 Nov 27 05:28 boinc_lockfile
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc      2785 Nov 27 05:28 pandaJob.out
[2025-11-27 13:39:56] -rw------- 1 boinc boinc    991570 Nov 27 05:29 agis_schedconf.cvmfs.json
[2025-11-27 13:39:56] drwx------ 5 boinc boinc      4096 Nov 27 05:29 pilot3
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc       532 Nov 27 13:36 boinc_task_state.xml
[2025-11-27 13:39:56] -rw------- 1 boinc boinc 923563909 Nov 27 13:38 HITS.47556137._007639.pool.root.1
[2025-11-27 13:39:56] -rw------- 1 boinc boinc      1022 Nov 27 13:39 memory_monitor_summary.json
[2025-11-27 13:39:56] -rw------- 1 boinc boinc   1516240 Nov 27 13:39 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:39:56] -rw------- 1 boinc boinc   1168918 Nov 27 13:39 log.47556137._007639.job.log.tgz.1
[2025-11-27 13:39:56] -rw------- 1 boinc boinc      8557 Nov 27 13:39 heartbeat.json
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc      8192 Nov 27 13:39 boinc_mmap_file
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc        28 Nov 27 13:39 wrapper_checkpoint.txt
[2025-11-27 13:39:56] -rw------- 1 boinc boinc       747 Nov 27 13:39 pilotlog.txt
[2025-11-27 13:39:56] -rw------- 1 boinc boinc        95 Nov 27 13:39 pilot_heartbeat.json
[2025-11-27 13:39:56] -rw------- 1 boinc boinc   4141753 Nov 27 13:39 log.47556137._007639.job.log.1
[2025-11-27 13:39:56] -rw------- 1 boinc boinc       353 Nov 27 13:39 output.list
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc       620 Nov 27 13:39 runtime_log
[2025-11-27 13:39:56] -rw------- 1 boinc boinc   5335040 Nov 27 13:39 result.tar.gz
[2025-11-27 13:39:56] -rw------- 1 boinc boinc       665 Nov 27 13:39 yRWMDmdWQh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4yKKDmYby8Io.diag
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc      8898 Nov 27 13:39 runtime_log.err
[2025-11-27 13:39:56] -rw-r--r-- 1 boinc boinc      5811 Nov 27 13:39 stderr.txt
[2025-11-27 13:39:56] HITS file was successfully produced:
[2025-11-27 13:39:56] -rw------- 1 boinc boinc 923563909 Nov 27 13:38 shared/HITS.pool.root.1
[2025-11-27 13:39:56]  *** Contents of shared directory: ***
[2025-11-27 13:39:56] total 1307968
[2025-11-27 13:39:56] -rw-r--r-- 2 boinc boinc 409837341 Nov 27 05:28 ATLAS.root_0
[2025-11-27 13:39:56] -rw-r--r-- 2 boinc boinc    590103 Nov 27 05:28 input.tar.gz
[2025-11-27 13:39:56] -rw-r--r-- 2 boinc boinc     15847 Nov 27 05:28 start_atlas.sh
[2025-11-27 13:39:56] -rw------- 1 boinc boinc 923563909 Nov 27 13:38 HITS.pool.root.1
[2025-11-27 13:39:56] -rw------- 1 boinc boinc   5335040 Nov 27 13:39 result.tar.gz
13:39:57 (1268531): run_atlas exited; CPU time 86942.295808
13:39:57 (1268531): called boinc_finish(0)

</stderr_txt>
]]>

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