Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:04:54 (2701679): wrapper (7.7.26015): starting
03:04:54 (2701679): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 03:04:54] Arguments: --nthreads 12
[2025-11-24 03:04:54] Threads: 12
[2025-11-24 03:04:54] Checking for CVMFS
[2025-11-24 03:04:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:04:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:04:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:04:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:04:54] 2.11.5.0 2229122 25311 307660 153242 1 390 40525444 45568000 14074 130560 0 249529202 99.813 147640293 28638 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-24 03:04:54] CVMFS is ok
[2025-11-24 03:04:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 03:04:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 03:04:55] Further information can be found at the LHC@home message board.
[2025-11-24 03:04:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:04:55] Checking for apptainer binary...
[2025-11-24 03:04:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 03:04:55] Running /usr/bin/apptainer --version
[2025-11-24 03:04:55] apptainer version 1.4.1-1.el9
[2025-11-24 03:04:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:04:55] wns0038.triumf.lcg
[2025-11-24 03:04:55] apptainer works
[2025-11-24 03:04:55] Set ATHENA_PROC_NUMBER=12
[2025-11-24 03:04:55] Set ATHENA_CORE_NUMBER=12
[2025-11-24 03:04:55] Starting ATLAS job with PandaID=6895374400
[2025-11-24 03:04:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 03:11:25]  *** The last 200 lines of the pilot log: ***
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | wrong length of table data, x=[1763982358.0, 1763982419.0], y=[1735.0, 684303.0] (must be same and length>=4)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | could have reported an average CPU frequency of 2460 MHz (4 samples)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | ..............................
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . Timing measurements:
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . get job = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . initial setup = 3 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . payload setup = 12 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . stage-in = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . payload execution = 127 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . stage-out = 1 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . log creation = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | ..............................
[2025-11-24 03:11:25] 2025-11-24 11:10:18,351 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 03:11:25] 2025-11-24 11:10:18,351 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895374400/pilotlog.txt
[2025-11-24 03:11:25] 2025-11-24 11:10:18,455 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-24 03:11:25] - Log from pilotlog.txt -
[2025-11-24 03:11:25] 2025-11-24 11:10:18,348 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895374400/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | INFO     | extracted standard info from prmon json
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | wrong length of table data, x=[1763982358.0, 1763982419.0], y=[1735.0, 684303.0] (must be same and length>=4)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | could have reported an average CPU frequency of 2460 MHz (4 samples)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | ..............................
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . Timing measurements:
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . get job = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . initial setup = 3 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . payload setup = 12 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . stage-in = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . payload execution = 127 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . stage-out = 1 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . log creation = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | ..............................
[2025-11-24 03:11:25] 2025-11-24 11:10:18,351 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 03:11:25] 2025-11-24 11:10:18,351 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895374400/pilotlog.txt
[2025-11-24 03:11:25] 2025-11-24 11:10:18,456 | WARNING  | 
[2025-11-24 03:11:25] [begin log extracts]
[2025-11-24 03:11:25] - Log from pilotlog.txt -
[2025-11-24 03:11:25] 2025-11-24 11:10:18,348 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895374400/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | INFO     | extracted standard info from prmon json
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 03:11:25] 2025-11-24 11:10:18,349 | WARNING  | wrong length of table data, x=[1763982358.0, 1763982419.0], y=[1735.0, 684303.0] (must be same and length>=4)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | could have reported an average CPU frequency of 2460 MHz (4 samples)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | ..............................
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . Timing measurements:
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . get job = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . initial setup = 3 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . payload setup = 12 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . stage-in = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . payload execution = 127 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . stage-out = 1 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | . log creation = 0 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,350 | INFO     | ..............................
[2025-11-24 03:11:25] 2025-11-24 11:10:18,351 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-24 03:11:25] 2025-11-24 11:10:18,351 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895374400/pilotlog.txt
[2025-11-24 03:11:25] [end log extracts]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,456 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,456 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-24 03:11:25] 2025-11-24 11:10:18,553 | INFO     | 
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | job summary report
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | --------------------------------------------------
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | PanDA job id: 6895374400
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | task id: 47556137
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-24 03:07:52,986 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-24 03:11:25] 2025-11-24 11:10:18,554 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | pilot state: failed 
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | transexitcode: 65
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | exeerrorcode: 65
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | exitcode: 65
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | cpuconsumptiontime: 45 s
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | nevents: 0
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | neventsw: 0
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | pid: 2711979
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | pgrp: 2711979
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | corecount: 12
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | event service: False
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | sizes: {0: 2298804, 10: 2299066, 11: 2299094, 144: 2324519, 147: 2328837, 281: 2328975}
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | --------------------------------------------------
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | 
[2025-11-24 03:11:25] 2025-11-24 11:10:18,555 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-24 03:11:25] 2025-11-24 11:10:18,704 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 03:11:25] 2025-11-24 11:10:18,706 | INFO     | job 6895374400 has completed (purged errors)
[2025-11-24 03:11:25] 2025-11-24 11:10:18,706 | INFO     | overall cleanup function is called
[2025-11-24 03:11:25] 2025-11-24 11:10:19,734 | INFO     | --- collectZombieJob: --- 10, [2711979]
[2025-11-24 03:11:25] 2025-11-24 11:10:19,734 | INFO     | zombie collector waiting for pid 2711979
[2025-11-24 03:11:25] 2025-11-24 11:10:19,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 03:11:25] 2025-11-24 11:10:19,734 | INFO     | collected zombie processes
[2025-11-24 03:11:25] 2025-11-24 11:10:19,734 | INFO     | will attempt to kill all subprocesses of pid=2711979
[2025-11-24 03:11:25] 2025-11-24 11:10:20,007 | INFO     | process IDs to be killed: [2711979] (in reverse order)
[2025-11-24 03:11:25] 2025-11-24 11:10:20,263 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 03:11:25] 2025-11-24 11:10:20,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 03:11:25] 2025-11-24 11:10:20,285 | INFO     | did not find any defunct processes belonging to 2711979
[2025-11-24 03:11:25] 2025-11-24 11:10:20,294 | INFO     | did not find any defunct processes belonging to 2711979
[2025-11-24 03:11:25] 2025-11-24 11:10:20,295 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 03:11:25] 2025-11-24 11:10:20,295 | INFO     | ready for new job
[2025-11-24 03:11:25] 2025-11-24 11:10:20,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 03:11:25] 2025-11-24 11:10:20,297 | INFO     | ***************************************
[2025-11-24 03:11:25] 2025-11-24 11:10:20,297 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 03:11:25] 2025-11-24 11:10:20,297 | INFO     | ***************************************
[2025-11-24 03:11:25] 2025-11-24 11:10:20,297 | INFO     | 
[2025-11-24 03:11:25] 2025-11-24 11:10:20,299 | INFO     | architecture information:
[2025-11-24 03:11:25] 2025-11-24 11:10:20,315 | INFO     | executing command: cat /etc/os-release
[2025-11-24 03:11:25] 2025-11-24 11:10:20,362 | INFO     | cat /etc/os-release:
[2025-11-24 03:11:25] NAME="CentOS Linux"
[2025-11-24 03:11:25] VERSION="7 (Core)"
[2025-11-24 03:11:25] ID="centos"
[2025-11-24 03:11:25] ID_LIKE="rhel fedora"
[2025-11-24 03:11:25] VERSION_ID="7"
[2025-11-24 03:11:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 03:11:25] ANSI_COLOR="0;31"
[2025-11-24 03:11:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 03:11:25] HOME_URL="https://www.centos.org/"
[2025-11-24 03:11:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 03:11:25] 
[2025-11-24 03:11:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 03:11:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 03:11:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 03:11:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 03:11:25] 
[2025-11-24 03:11:25] 2025-11-24 11:10:20,362 | INFO     | ***************************************
[2025-11-24 03:11:25] 2025-11-24 11:10:20,870 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-24 03:11:25] 2025-11-24 11:10:20,983 | INFO     | sufficient remaining disk space (1534657036288 B)
[2025-11-24 03:11:25] 2025-11-24 11:10:20,984 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 03:11:25] 2025-11-24 11:10:20,984 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 03:11:25] 2025-11-24 11:10:20,984 | INFO     | update_server=False
[2025-11-24 03:11:25] 2025-11-24 11:10:20,984 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 03:11:25] 2025-11-24 11:10:20,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:11:25] 2025-11-24 11:10:20,985 | INFO     | aborting loop
[2025-11-24 03:11:25] 2025-11-24 11:10:20,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 03:11:25] 2025-11-24 11:10:21,329 | INFO     | all payload control threads have been joined
[2025-11-24 03:11:25] 2025-11-24 11:10:21,430 | INFO     | all data control threads have been joined
[2025-11-24 03:11:25] 2025-11-24 11:10:21,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 03:11:25] 2025-11-24 11:10:21,990 | INFO     | [job] retrieve thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:21,992 | INFO     | [job] job monitor thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,033 | INFO     | [payload] failed_post thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,076 | INFO     | all job control threads have been joined
[2025-11-24 03:11:25] 2025-11-24 11:10:22,263 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,335 | INFO     | [payload] control thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,386 | INFO     | [job] validate thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,436 | INFO     | [data] control thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,517 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,779 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,882 | INFO     | [data] copytool_in thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:22,948 | INFO     | [payload] validate_post thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:23,082 | INFO     | [job] control thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:23,360 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:23,565 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 03:11:25] 2025-11-24 11:10:23,990 | INFO     | [data] copytool_out thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:24,571 | INFO     | [job] queue monitor thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:25,001 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 03:11:25] 2025-11-24 11:10:52,026 | INFO     | PID=2705417 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 03:11:25] 2025-11-24 11:10:52,026 | INFO     | .. there are 20 such processes running
[2025-11-24 03:11:25] 2025-11-24 11:10:52,026 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 03:11:25] 2025-11-24 11:10:52,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 03:11:25] 2025-11-24 11:10:52,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 03:11:25] 2025-11-24 11:11:18,603 | INFO     | [monitor] cgroup control has ended
[2025-11-24 03:11:25] 2025-11-24 11:11:19,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140071303526208)>', '<ExcThread(monitor, started 140070984062720)>']
[2025-11-24 03:11:25] 2025-11-24 11:11:20,194 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 03:11:25] 2025-11-24 11:11:20,194 | INFO     | [monitor] control thread has ended
[2025-11-24 03:11:25] 2025-11-24 11:11:24,733 | INFO     | all workflow threads have been joined
[2025-11-24 03:11:25] 2025-11-24 11:11:24,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 03:11:25] 2025-11-24 11:11:24,733 | INFO     | traces error code: 0
[2025-11-24 03:11:25] 2025-11-24 11:11:24,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 03:11:25] 2025-11-24 11:11:25,198 [wrapper] ==== pilot stdout END ====
[2025-11-24 03:11:25] 2025-11-24 11:11:25,221 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 03:11:25] 2025-11-24 11:11:25,235 [wrapper] pilotpid: 2705417
[2025-11-24 03:11:25] 2025-11-24 11:11:25,262 [wrapper] Pilot exit status: 0
[2025-11-24 03:11:25] 2025-11-24 11:11:25,273 [wrapper] pandaids: 6895374400
[2025-11-24 03:11:25] 2025-11-24 11:11:25,326 [wrapper] cleanup supervisor_pilot 2705423 2705418
[2025-11-24 03:11:25] 2025-11-24 11:11:25,330 [wrapper] Test setup, not cleaning
[2025-11-24 03:11:25] 2025-11-24 11:11:25,332 [wrapper] apfmon messages muted
[2025-11-24 03:11:25] 2025-11-24 11:11:25,349 [wrapper] ==== wrapper stdout END ====
[2025-11-24 03:11:25] 2025-11-24 11:11:25,371 [wrapper] ==== wrapper stderr END ====
[2025-11-24 03:11:25]  *** Error codes and diagnostics ***
[2025-11-24 03:11:25]     "exeErrorCode": 65,
[2025-11-24 03:11:25]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-24 03:11:25]     "pilotErrorCode": 1305,
[2025-11-24 03:11:25]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-24 03:11:25]  *** Listing of results directory ***
[2025-11-24 03:11:25] total 402848
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc    576529 Nov 23 15:11 pilot3.tar.gz
[2025-11-24 03:11:25] -rwx------. 1 boinc boinc     36292 Nov 23 15:17 runpilot2-wrapper.sh
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc      5112 Nov 23 15:17 queuedata.json
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc       100 Nov 24 03:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 03:11:25] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 03:04 run_atlas
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc       105 Nov 24 03:04 job.xml
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc      6595 Nov 24 03:04 init_data.xml
[2025-11-24 03:11:25] -rw-r--r--. 2 boinc boinc 408293933 Nov 24 03:04 EVNT.47483658._000941.pool.root.1
[2025-11-24 03:11:25] drwxrwx--x. 2 boinc boinc      4096 Nov 24 03:04 shared
[2025-11-24 03:11:25] -rw-r--r--. 2 boinc boinc    590102 Nov 24 03:04 input.tar.gz
[2025-11-24 03:11:25] -rw-r--r--. 2 boinc boinc     15847 Nov 24 03:04 start_atlas.sh
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc         0 Nov 24 03:04 boinc_lockfile
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc      2786 Nov 24 03:04 pandaJob.out
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc    989824 Nov 24 03:05 agis_schedconf.cvmfs.json
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc   1526164 Nov 24 03:05 agis_ddmendpoints.agis.ALL.json
[2025-11-24 03:11:25] drwx------. 5 boinc boinc      4096 Nov 24 03:05 pilot3
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc       524 Nov 24 03:07 boinc_task_state.xml
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc       987 Nov 24 03:07 memory_monitor_summary.json
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc     48888 Nov 24 03:08 log.47556137._009273.job.log.tgz.1
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc     10339 Nov 24 03:10 heartbeat.json
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc        95 Nov 24 03:10 pilot_heartbeat.json
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc        23 Nov 24 03:11 wrapper_checkpoint.txt
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc      8192 Nov 24 03:11 boinc_mmap_file
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc      4823 Nov 24 03:11 pilotlog.txt
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc    105181 Nov 24 03:11 log.47556137._009273.job.log.1
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc       186 Nov 24 03:11 output.list
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc       620 Nov 24 03:11 runtime_log
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc    174080 Nov 24 03:11 result.tar.gz
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc      8636 Nov 24 03:11 runtime_log.err
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc       644 Nov 24 03:11 RqHMDm6VYh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDpIKDmAw3HSn.diag
[2025-11-24 03:11:25] -rw-r--r--. 1 boinc boinc     22462 Nov 24 03:11 stderr.txt
[2025-11-24 03:11:25] No HITS result produced
[2025-11-24 03:11:25]  *** Contents of shared directory: ***
[2025-11-24 03:11:25] total 399496
[2025-11-24 03:11:25] -rw-r--r--. 2 boinc boinc 408293933 Nov 24 03:04 ATLAS.root_0
[2025-11-24 03:11:25] -rw-r--r--. 2 boinc boinc    590102 Nov 24 03:04 input.tar.gz
[2025-11-24 03:11:25] -rw-r--r--. 2 boinc boinc     15847 Nov 24 03:04 start_atlas.sh
[2025-11-24 03:11:25] -rw-------. 1 boinc boinc    174080 Nov 24 03:11 result.tar.gz
03:11:27 (2701679): run_atlas exited; CPU time 47.080076
03:11:27 (2701679): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN