Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:17:00 (12820): wrapper (7.7.26015): starting
05:17:00 (12820): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:17:00] Arguments: --nthreads 8
[2025-11-24 05:17:00] Threads: 8
[2025-11-24 05:17:00] Checking for CVMFS
[2025-11-24 05:17:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:17:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:17:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:17:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:17:00] 2.11.2.0 6956 114645 141068 153241 3 9 12692391 18432000 1885 130560 0 83511945 99.973 4903653 30924 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 05:17:00] CVMFS is ok
[2025-11-24 05:17:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:17:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:17:00] Further information can be found at the LHC@home message board.
[2025-11-24 05:17:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:17:00] Checking for apptainer binary...
[2025-11-24 05:17:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:17:00] Running /usr/bin/apptainer --version
[2025-11-24 05:17:00] apptainer version 1.3.2-1.el7
[2025-11-24 05:17:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:17:01] c-206-16.aglt2.org
[2025-11-24 05:17:01] apptainer works
[2025-11-24 05:17:01] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:17:01] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:17:01] Starting ATLAS job with PandaID=6895352829
[2025-11-24 05:17:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 00:59:15]  *** The last 200 lines of the pilot log: ***
[2025-11-25 00:59:15] 2025-11-25 05:58:17,334 | INFO     | time since job start (70864s) is within the limit (172800.0s)
[2025-11-25 00:59:15] 2025-11-25 05:58:17,986 | INFO     | monitor loop #5061: job 0:6895352829 is in state 'finished'
[2025-11-25 00:59:15] 2025-11-25 05:58:17,986 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,314 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-25 00:59:15] 2025-11-25 05:58:18,318 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2111.7916666666665
[2025-11-25 00:59:15] 2025-11-25 05:58:18,320 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6895352829/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,327 | INFO     | extracted standard info from prmon json
[2025-11-25 00:59:15] 2025-11-25 05:58:18,327 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 00:59:15] 2025-11-25 05:58:18,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 00:59:15] 2025-11-25 05:58:18,342 | INFO     | fitting pss+swap vs Time
[2025-11-25 00:59:15] 2025-11-25 05:58:18,343 | INFO     | sum of square deviations: 486515559147.0054
[2025-11-25 00:59:15] 2025-11-25 05:58:18,367 | INFO     | sum of deviations: 2107887114475.7205
[2025-11-25 00:59:15] 2025-11-25 05:58:18,367 | INFO     | mean x: 1764014869.1135972
[2025-11-25 00:59:15] 2025-11-25 05:58:18,367 | INFO     | mean y: 2861984.290017212
[2025-11-25 00:59:15] 2025-11-25 05:58:18,367 | INFO     | intersect: -7639944381.178332
[2025-11-25 00:59:15] 2025-11-25 05:58:18,368 | INFO     | chi2: 6.599897141313686
[2025-11-25 00:59:15] 2025-11-25 05:58:18,369 | INFO     | sum of square deviations: 480262440757.61444
[2025-11-25 00:59:15] 2025-11-25 05:58:18,393 | INFO     | sum of deviations: 2439713573827.127
[2025-11-25 00:59:15] 2025-11-25 05:58:18,393 | INFO     | mean x: 1764014716.6162488
[2025-11-25 00:59:15] 2025-11-25 05:58:18,393 | INFO     | mean y: 2870071.5678478824
[2025-11-25 00:59:15] 2025-11-25 05:58:18,393 | INFO     | intersect: -8958252604.963757
[2025-11-25 00:59:15] 2025-11-25 05:58:18,394 | INFO     | chi2: 4.1347978020609535
[2025-11-25 00:59:15] 2025-11-25 05:58:18,394 | INFO     | current chi2=4.1347978020609535 (change=37.350572084250146 %)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,395 | INFO     | sum of square deviations: 474063137330.70715
[2025-11-25 00:59:15] 2025-11-25 05:58:18,422 | INFO     | sum of deviations: 2632794095865.9756
[2025-11-25 00:59:15] 2025-11-25 05:58:18,422 | INFO     | mean x: 1764014564.1189237
[2025-11-25 00:59:15] 2025-11-25 05:58:18,422 | INFO     | mean y: 2874820.6571180555
[2025-11-25 00:59:15] 2025-11-25 05:58:18,422 | INFO     | intersect: -9793894351.450083
[2025-11-25 00:59:15] 2025-11-25 05:58:18,423 | INFO     | chi2: 3.2387321864004646
[2025-11-25 00:59:15] 2025-11-25 05:58:18,423 | INFO     | current chi2=3.2387321864004646 (change=21.671328528177433 %)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,423 | INFO     | right removable region: 1151
[2025-11-25 00:59:15] 2025-11-25 05:58:18,424 | INFO     | sum of square deviations: 480262076465.8459
[2025-11-25 00:59:15] 2025-11-25 05:58:18,448 | INFO     | sum of deviations: 1802861875333.996
[2025-11-25 00:59:15] 2025-11-25 05:58:18,448 | INFO     | mean x: 1764015021.6153846
[2025-11-25 00:59:15] 2025-11-25 05:58:18,448 | INFO     | mean y: 2869414.9325842694
[2025-11-25 00:59:15] 2025-11-25 05:58:18,448 | INFO     | intersect: -6619088857.0798
[2025-11-25 00:59:15] 2025-11-25 05:58:18,449 | INFO     | chi2: 4.5477708242782455
[2025-11-25 00:59:15] 2025-11-25 05:58:18,449 | INFO     | current chi2=4.5477708242782455 (change=31.093307563683826 %)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,450 | INFO     | sum of square deviations: 474062550023.6451
[2025-11-25 00:59:15] 2025-11-25 05:58:18,474 | INFO     | sum of deviations: 1706290717007.7637
[2025-11-25 00:59:15] 2025-11-25 05:58:18,474 | INFO     | mean x: 1764015174.1154513
[2025-11-25 00:59:15] 2025-11-25 05:58:18,474 | INFO     | mean y: 2871790.092013889
[2025-11-25 00:59:15] 2025-11-25 05:58:18,474 | INFO     | intersect: -6346338279.557868
[2025-11-25 00:59:15] 2025-11-25 05:58:18,475 | INFO     | chi2: 4.441155871369853
[2025-11-25 00:59:15] 2025-11-25 05:58:18,476 | INFO     | current chi2=4.441155871369853 (change=2.34433433494998 %)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,476 | INFO     | left removable region: 20
[2025-11-25 00:59:15] 2025-11-25 05:58:18,477 | INFO     | sum of square deviations: 448607434420.033
[2025-11-25 00:59:15] 2025-11-25 05:58:18,499 | INFO     | sum of deviations: 2121407471178.8303
[2025-11-25 00:59:15] 2025-11-25 05:58:18,499 | INFO     | mean x: 1764015143.621574
[2025-11-25 00:59:15] 2025-11-25 05:58:18,499 | INFO     | mean y: 2889285.3757736515
[2025-11-25 00:59:15] 2025-11-25 05:58:18,500 | INFO     | intersect: -8338913854.354567
[2025-11-25 00:59:15] 2025-11-25 05:58:18,500 | INFO     | chi2: 0.85397886199985
[2025-11-25 00:59:15] 2025-11-25 05:58:18,501 | INFO     | current memory leak: 4.73 B/s (using 1131 data points, chi2=0.85)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,501 | INFO     | could have reported an average CPU frequency of 2627 MHz (42 samples)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | ..............................
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . Timing measurements:
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . get job = 0 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . initial setup = 2 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . payload setup = 5 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . stage-in = 0 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . payload execution = 70833 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . stage-out = 3 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | . log creation = 0 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,502 | INFO     | ..............................
[2025-11-25 00:59:15] 2025-11-25 05:58:18,904 | INFO     | 
[2025-11-25 00:59:15] 2025-11-25 05:58:18,904 | INFO     | job summary report
[2025-11-25 00:59:15] 2025-11-25 05:58:18,904 | INFO     | --------------------------------------------------
[2025-11-25 00:59:15] 2025-11-25 05:58:18,904 | INFO     | PanDA job id: 6895352829
[2025-11-25 00:59:15] 2025-11-25 05:58:18,905 | INFO     | task id: 47556137
[2025-11-25 00:59:15] 2025-11-25 05:58:18,905 | INFO     | errors: (none)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 00:59:15] 2025-11-25 05:58:18,905 | INFO     | pilot state: finished 
[2025-11-25 00:59:15] 2025-11-25 05:58:18,905 | INFO     | transexitcode: 0
[2025-11-25 00:59:15] 2025-11-25 05:58:18,905 | INFO     | exeerrorcode: 0
[2025-11-25 00:59:15] 2025-11-25 05:58:18,906 | INFO     | exeerrordiag: 
[2025-11-25 00:59:15] 2025-11-25 05:58:18,906 | INFO     | exitcode: 0
[2025-11-25 00:59:15] 2025-11-25 05:58:18,906 | INFO     | exitmsg: OK
[2025-11-25 00:59:15] 2025-11-25 05:58:18,906 | INFO     | cpuconsumptiontime: 543130 s
[2025-11-25 00:59:15] 2025-11-25 05:58:18,906 | INFO     | nevents: 1000
[2025-11-25 00:59:15] 2025-11-25 05:58:18,906 | INFO     | neventsw: 0
[2025-11-25 00:59:15] 2025-11-25 05:58:18,907 | INFO     | pid: 23026
[2025-11-25 00:59:15] 2025-11-25 05:58:18,907 | INFO     | pgrp: 23026
[2025-11-25 00:59:15] 2025-11-25 05:58:18,907 | INFO     | corecount: 8
[2025-11-25 00:59:15] 2025-11-25 05:58:18,907 | INFO     | event service: False
[2025-11-25 00:59:15] 2025-11-25 05:58:18,907 | INFO     | sizes: {0: 2298573, 1: 2298828, 2: 2298828, 5: 2299118, 12: 2299174, 70842: 2356125, 70846: 2365966, 70850: 2366156}
[2025-11-25 00:59:15] 2025-11-25 05:58:18,907 | INFO     | --------------------------------------------------
[2025-11-25 00:59:15] 2025-11-25 05:58:18,908 | INFO     | 
[2025-11-25 00:59:15] 2025-11-25 05:58:18,908 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 00:59:15] 2025-11-25 05:58:18,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,930 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,930 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,930 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,930 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,930 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,931 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,931 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 00:59:15] 2025-11-25 05:58:18,931 | INFO     | job 6895352829 has completed (purged errors)
[2025-11-25 00:59:15] 2025-11-25 05:58:18,931 | INFO     | overall cleanup function is called
[2025-11-25 00:59:15] 2025-11-25 05:58:19,947 | INFO     | --- collectZombieJob: --- 10, [23026]
[2025-11-25 00:59:15] 2025-11-25 05:58:19,947 | INFO     | zombie collector waiting for pid 23026
[2025-11-25 00:59:15] 2025-11-25 05:58:19,947 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 00:59:15] 2025-11-25 05:58:19,947 | INFO     | collected zombie processes
[2025-11-25 00:59:15] 2025-11-25 05:58:19,947 | INFO     | will attempt to kill all subprocesses of pid=23026
[2025-11-25 00:59:15] 2025-11-25 05:58:20,086 | INFO     | process IDs to be killed: [23026] (in reverse order)
[2025-11-25 00:59:15] 2025-11-25 05:58:20,129 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 00:59:15] 2025-11-25 05:58:20,130 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 00:59:15] 2025-11-25 05:58:20,132 | INFO     | did not find any defunct processes belonging to 23026
[2025-11-25 00:59:15] 2025-11-25 05:58:20,135 | INFO     | did not find any defunct processes belonging to 23026
[2025-11-25 00:59:15] 2025-11-25 05:58:20,136 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 00:59:15] 2025-11-25 05:58:20,137 | INFO     | ready for new job
[2025-11-25 00:59:15] 2025-11-25 05:58:20,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 00:59:15] 2025-11-25 05:58:20,140 | INFO     | ***************************************
[2025-11-25 00:59:15] 2025-11-25 05:58:20,141 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 00:59:15] 2025-11-25 05:58:20,141 | INFO     | ***************************************
[2025-11-25 00:59:15] 2025-11-25 05:58:20,141 | INFO     | 
[2025-11-25 00:59:15] 2025-11-25 05:58:20,142 | INFO     | architecture information:
[2025-11-25 00:59:15] 2025-11-25 05:58:20,142 | INFO     | executing command: cat /etc/os-release
[2025-11-25 00:59:15] 2025-11-25 05:58:20,153 | INFO     | cat /etc/os-release:
[2025-11-25 00:59:15] NAME="CentOS Linux"
[2025-11-25 00:59:15] VERSION="7 (Core)"
[2025-11-25 00:59:15] ID="centos"
[2025-11-25 00:59:15] ID_LIKE="rhel fedora"
[2025-11-25 00:59:15] VERSION_ID="7"
[2025-11-25 00:59:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 00:59:15] ANSI_COLOR="0;31"
[2025-11-25 00:59:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 00:59:15] HOME_URL="https://www.centos.org/"
[2025-11-25 00:59:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 00:59:15] 
[2025-11-25 00:59:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 00:59:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 00:59:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 00:59:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 00:59:15] 
[2025-11-25 00:59:15] 2025-11-25 05:58:20,154 | INFO     | ***************************************
[2025-11-25 00:59:15] 2025-11-25 05:58:20,657 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 00:59:15] 2025-11-25 05:58:20,672 | INFO     | sufficient remaining disk space (24844959744 B)
[2025-11-25 00:59:15] 2025-11-25 05:58:20,672 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 00:59:15] 2025-11-25 05:58:20,672 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 00:59:15] 2025-11-25 05:58:20,672 | INFO     | update_server=False
[2025-11-25 00:59:15] 2025-11-25 05:58:20,673 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 00:59:15] 2025-11-25 05:58:20,673 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 00:59:15] 2025-11-25 05:58:20,857 | INFO     | all data control threads have been joined
[2025-11-25 00:59:15] 2025-11-25 05:58:21,084 | INFO     | all payload control threads have been joined
[2025-11-25 00:59:15] 2025-11-25 05:58:21,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 00:59:15] 2025-11-25 05:58:21,388 | INFO     | all job control threads have been joined
[2025-11-25 00:59:15] 2025-11-25 05:58:21,494 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:59:15] 2025-11-25 05:58:21,495 | INFO     | aborting loop
[2025-11-25 00:59:15] 2025-11-25 05:58:21,677 | INFO     | [job] retrieve thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:21,862 | INFO     | [data] control thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:21,924 | INFO     | [job] validate thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:21,982 | INFO     | [payload] validate_post thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,089 | INFO     | [payload] control thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,145 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,394 | INFO     | [job] control thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,420 | INFO     | [payload] failed_post thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,427 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,439 | INFO     | [data] copytool_in thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,500 | INFO     | [job] job monitor thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,678 | INFO     | [data] copytool_out thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,750 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:22,924 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:23,587 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 00:59:15] 2025-11-25 05:58:24,593 | INFO     | [job] queue monitor thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:25,258 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 00:59:15] 2025-11-25 05:58:50,557 | INFO     | PID=16587 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 00:59:15] 2025-11-25 05:58:50,557 | INFO     | .. there are 3 such processes running
[2025-11-25 00:59:15] 2025-11-25 05:58:50,557 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 00:59:15] 2025-11-25 05:58:50,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 00:59:15] 2025-11-25 05:58:50,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 00:59:15] 2025-11-25 05:59:10,113 | INFO     | [monitor] cgroup control has ended
[2025-11-25 00:59:15] 2025-11-25 05:59:10,691 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139820270815040)>', '<ExcThread(monitor, started 139819690743552)>']
[2025-11-25 00:59:15] 2025-11-25 05:59:11,662 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 00:59:15] 2025-11-25 05:59:11,662 | INFO     | [monitor] control thread has ended
[2025-11-25 00:59:15] 2025-11-25 05:59:15,716 | INFO     | all workflow threads have been joined
[2025-11-25 00:59:15] 2025-11-25 05:59:15,717 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 00:59:15] 2025-11-25 05:59:15,717 | INFO     | traces error code: 0
[2025-11-25 00:59:15] 2025-11-25 05:59:15,717 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 00:59:15] 2025-11-25 05:59:15,801 [wrapper] ==== pilot stdout END ====
[2025-11-25 00:59:15] 2025-11-25 05:59:15,804 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 00:59:15] 2025-11-25 05:59:15,807 [wrapper] pilotpid: 16587
[2025-11-25 00:59:15] 2025-11-25 05:59:15,809 [wrapper] Pilot exit status: 0
[2025-11-25 00:59:15] 2025-11-25 05:59:15,817 [wrapper] pandaids: 6895352829
[2025-11-25 00:59:15] 2025-11-25 05:59:15,858 [wrapper] cleanup supervisor_pilot 14177 16588
[2025-11-25 00:59:15] 2025-11-25 05:59:15,861 [wrapper] Test setup, not cleaning
[2025-11-25 00:59:15] 2025-11-25 05:59:15,863 [wrapper] apfmon messages muted
[2025-11-25 00:59:15] 2025-11-25 05:59:15,865 [wrapper] ==== wrapper stdout END ====
[2025-11-25 00:59:15] 2025-11-25 05:59:15,868 [wrapper] ==== wrapper stderr END ====
[2025-11-25 00:59:15]  *** Error codes and diagnostics ***
[2025-11-25 00:59:16]     "exeErrorCode": 0,
[2025-11-25 00:59:16]     "exeErrorDiag": "",
[2025-11-25 00:59:16]     "pilotErrorCode": 0,
[2025-11-25 00:59:16]     "pilotErrorDiag": "",
[2025-11-25 00:59:16]  *** Listing of results directory ***
[2025-11-25 00:59:16] total 1322964
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 22:47 pilot3.tar.gz
[2025-11-25 00:59:16] -rwx------ 1 boincer umatlas     36292 Nov 22 23:05 runpilot2-wrapper.sh
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 23:05 queuedata.json
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas       100 Nov 24 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 00:59:16] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 05:16 run_atlas
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas       105 Nov 24 05:16 job.xml
[2025-11-25 00:59:16] -rw-r--r-- 2 boincer umatlas 408779256 Nov 24 05:17 EVNT.47483658._000605.pool.root.1
[2025-11-25 00:59:16] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 05:17 start_atlas.sh
[2025-11-25 00:59:16] drwxrwx--x 2 boincer umatlas      4096 Nov 24 05:17 shared
[2025-11-25 00:59:16] -rw-r--r-- 2 boincer umatlas    590097 Nov 24 05:17 input.tar.gz
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas         0 Nov 24 05:17 boinc_lockfile
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas      2782 Nov 24 05:17 pandaJob.out
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas        57 Nov 24 05:17 setup.sh.local
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas    989824 Nov 24 05:17 agis_schedconf.cvmfs.json
[2025-11-25 00:59:16] drwx------ 5 boincer umatlas      4096 Nov 24 05:17 pilot3
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas       533 Nov 25 00:40 boinc_task_state.xml
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas      5952 Nov 25 00:56 init_data.xml
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas 917710200 Nov 25 00:57 HITS.47556137._006001.pool.root.1
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas      1067 Nov 25 00:58 memory_monitor_summary.json
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas        95 Nov 25 00:58 pilot_heartbeat.json
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas   1516227 Nov 25 00:58 agis_ddmendpoints.agis.ALL.json
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas   2324229 Nov 25 00:58 log.47556137._006001.job.log.tgz.1
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas      8658 Nov 25 00:58 heartbeat.json
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 00:59 boinc_mmap_file
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas        29 Nov 25 00:59 wrapper_checkpoint.txt
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas      4821 Nov 25 00:59 pilotlog.txt
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas   9828852 Nov 25 00:59 log.47556137._006001.job.log.1
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas       353 Nov 25 00:59 output.list
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas       620 Nov 25 00:59 runtime_log
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas  12175360 Nov 25 00:59 result.tar.gz
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 00:59 runtime_log.err
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas       668 Nov 25 00:59 ppZKDmGXGh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIbKKDmM6dUfm.diag
[2025-11-25 00:59:16] -rw-r--r-- 1 boincer umatlas     21302 Nov 25 00:59 stderr.txt
[2025-11-25 00:59:16] HITS file was successfully produced:
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas 917710200 Nov 25 00:57 shared/HITS.pool.root.1
[2025-11-25 00:59:16]  *** Contents of shared directory: ***
[2025-11-25 00:59:16] total 1307896
[2025-11-25 00:59:16] -rw-r--r-- 2 boincer umatlas 408779256 Nov 24 05:17 ATLAS.root_0
[2025-11-25 00:59:16] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 05:17 start_atlas.sh
[2025-11-25 00:59:16] -rw-r--r-- 2 boincer umatlas    590097 Nov 24 05:17 input.tar.gz
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas 917710200 Nov 25 00:57 HITS.pool.root.1
[2025-11-25 00:59:16] -rw------- 1 boincer umatlas  12175360 Nov 25 00:59 result.tar.gz
00:59:17 (12820): run_atlas exited; CPU time 541794.036605
00:59:17 (12820): called boinc_finish(0)

</stderr_txt>
]]>

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