Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:30:55 (11374): wrapper (7.7.26015): starting
05:30:55 (11374): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 05:30:55] Arguments: --nthreads 8
[2025-11-24 05:30:55] Threads: 8
[2025-11-24 05:30:55] Checking for CVMFS
[2025-11-24 05:30:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 05:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 05:30:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 05:30:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 05:30:55] 2.11.2.0 28294 114699 141384 153242 3 53 11876269 18432001 968 130560 0 81238906 99.972 4844719 29838 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 05:30:55] CVMFS is ok
[2025-11-24 05:30:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 05:30:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 05:30:55] Further information can be found at the LHC@home message board.
[2025-11-24 05:30:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 05:30:55] Checking for apptainer binary...
[2025-11-24 05:30:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 05:30:55] Running /usr/bin/apptainer --version
[2025-11-24 05:30:55] apptainer version 1.3.2-1.el7
[2025-11-24 05:30:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 05:30:56] c-206-25.aglt2.org
[2025-11-24 05:30:56] apptainer works
[2025-11-24 05:30:56] Set ATHENA_PROC_NUMBER=8
[2025-11-24 05:30:56] Set ATHENA_CORE_NUMBER=8
[2025-11-24 05:30:56] Starting ATLAS job with PandaID=6895352804
[2025-11-24 05:30:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:00:09]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:00:09] 2025-11-25 05:59:06,768 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:00:09] 2025-11-25 05:59:06,769 | INFO     | sum of square deviations: 470368168905.0358
[2025-11-25 01:00:09] 2025-11-25 05:59:06,795 | INFO     | sum of deviations: 2084127138063.9402
[2025-11-25 01:00:09] 2025-11-25 05:59:06,795 | INFO     | mean x: 1764015306.573542
[2025-11-25 01:00:09] 2025-11-25 05:59:06,795 | INFO     | mean y: 2864449.2610966056
[2025-11-25 01:00:09] 2025-11-25 05:59:06,795 | INFO     | intersect: -7813209034.087958
[2025-11-25 01:00:09] 2025-11-25 05:59:06,796 | INFO     | chi2: 6.307307085975595
[2025-11-25 01:00:09] 2025-11-25 05:59:06,797 | INFO     | sum of square deviations: 464254469218.38434
[2025-11-25 01:00:09] 2025-11-25 05:59:06,823 | INFO     | sum of deviations: 2459914663744.472
[2025-11-25 01:00:09] 2025-11-25 05:59:06,823 | INFO     | mean x: 1764015154.0760489
[2025-11-25 01:00:09] 2025-11-25 05:59:06,823 | INFO     | mean y: 2873819.0865384615
[2025-11-25 01:00:09] 2025-11-25 05:59:06,823 | INFO     | intersect: -9343997417.037043
[2025-11-25 01:00:09] 2025-11-25 05:59:06,824 | INFO     | chi2: 3.153766131616885
[2025-11-25 01:00:09] 2025-11-25 05:59:06,824 | INFO     | current chi2=3.153766131616885 (change=49.998214949303204 %)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,826 | INFO     | sum of square deviations: 458193979831.71765
[2025-11-25 01:00:09] 2025-11-25 05:59:06,851 | INFO     | sum of deviations: 2638955321687.9023
[2025-11-25 01:00:09] 2025-11-25 05:59:06,851 | INFO     | mean x: 1764015001.5785778
[2025-11-25 01:00:09] 2025-11-25 05:59:06,852 | INFO     | mean y: 2878323.3977172957
[2025-11-25 01:00:09] 2025-11-25 05:59:06,852 | INFO     | intersect: -10156916394.251772
[2025-11-25 01:00:09] 2025-11-25 05:59:06,853 | INFO     | chi2: 2.3539961131785865
[2025-11-25 01:00:09] 2025-11-25 05:59:06,853 | INFO     | current chi2=2.3539961131785865 (change=25.359204996860985 %)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,854 | INFO     | sum of square deviations: 452186398947.69836
[2025-11-25 01:00:09] 2025-11-25 05:59:06,880 | INFO     | sum of deviations: 2697770806484.508
[2025-11-25 01:00:09] 2025-11-25 05:59:06,880 | INFO     | mean x: 1764014849.080247
[2025-11-25 01:00:09] 2025-11-25 05:59:06,880 | INFO     | mean y: 2879812.7636684305
[2025-11-25 01:00:09] 2025-11-25 05:59:06,880 | INFO     | intersect: -10521337132.125687
[2025-11-25 01:00:09] 2025-11-25 05:59:06,881 | INFO     | chi2: 2.14146039678245
[2025-11-25 01:00:09] 2025-11-25 05:59:06,881 | INFO     | current chi2=2.14146039678245 (change=9.02871993739832 %)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,881 | INFO     | right removable region: 1133
[2025-11-25 01:00:09] 2025-11-25 05:59:06,883 | INFO     | sum of square deviations: 464254137195.5346
[2025-11-25 01:00:09] 2025-11-25 05:59:06,908 | INFO     | sum of deviations: 1813187256052.7463
[2025-11-25 01:00:09] 2025-11-25 05:59:06,908 | INFO     | mean x: 1764015459.0751748
[2025-11-25 01:00:09] 2025-11-25 05:59:06,908 | INFO     | mean y: 2871198.0262237764
[2025-11-25 01:00:09] 2025-11-25 05:59:06,908 | INFO     | intersect: -6886653511.859132
[2025-11-25 01:00:09] 2025-11-25 05:59:06,909 | INFO     | chi2: 4.479286272953202
[2025-11-25 01:00:09] 2025-11-25 05:59:06,909 | INFO     | current chi2=4.479286272953202 (change=28.982587784365666 %)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,910 | INFO     | sum of square deviations: 458193385692.18066
[2025-11-25 01:00:09] 2025-11-25 05:59:06,934 | INFO     | sum of deviations: 1728130399153.462
[2025-11-25 01:00:09] 2025-11-25 05:59:06,934 | INFO     | mean x: 1764015611.5759437
[2025-11-25 01:00:09] 2025-11-25 05:59:06,934 | INFO     | mean y: 2873337.827041264
[2025-11-25 01:00:09] 2025-11-25 05:59:06,934 | INFO     | intersect: -6650319611.129353
[2025-11-25 01:00:09] 2025-11-25 05:59:06,935 | INFO     | chi2: 4.404091675387392
[2025-11-25 01:00:09] 2025-11-25 05:59:06,935 | INFO     | current chi2=4.404091675387392 (change=1.6787182819693725 %)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,935 | INFO     | left removable region: 20
[2025-11-25 01:00:09] 2025-11-25 05:59:06,936 | INFO     | sum of square deviations: 427527064182.72766
[2025-11-25 01:00:09] 2025-11-25 05:59:06,958 | INFO     | sum of deviations: 2218749167848.1694
[2025-11-25 01:00:09] 2025-11-25 05:59:06,958 | INFO     | mean x: 1764015428.5822103
[2025-11-25 01:00:09] 2025-11-25 05:59:06,959 | INFO     | mean y: 2891945.533692722
[2025-11-25 01:00:09] 2025-11-25 05:59:06,959 | INFO     | intersect: -9151868284.02053
[2025-11-25 01:00:09] 2025-11-25 05:59:06,960 | INFO     | chi2: 0.18876380298891307
[2025-11-25 01:00:09] 2025-11-25 05:59:06,960 | INFO     | current memory leak: 5.19 B/s (using 1113 data points, chi2=0.19)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,960 | INFO     | could have reported an average CPU frequency of 2582 MHz (42 samples)
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | ..............................
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . Timing measurements:
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . get job = 0 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . initial setup = 2 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . payload setup = 5 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . stage-in = 0 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . payload execution = 70043 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . stage-out = 3 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,961 | INFO     | . log creation = 0 s
[2025-11-25 01:00:09] 2025-11-25 05:59:06,962 | INFO     | ..............................
[2025-11-25 01:00:09] 2025-11-25 05:59:07,036 | INFO     | 
[2025-11-25 01:00:09] 2025-11-25 05:59:07,036 | INFO     | job summary report
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | --------------------------------------------------
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | PanDA job id: 6895352804
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | task id: 47556137
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | errors: (none)
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | pilot state: finished 
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | transexitcode: 0
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | exeerrorcode: 0
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | exeerrordiag: 
[2025-11-25 01:00:09] 2025-11-25 05:59:07,037 | INFO     | exitcode: 0
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | exitmsg: OK
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | cpuconsumptiontime: 543083 s
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | nevents: 1000
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | neventsw: 0
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | pid: 1126
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | pgrp: 1126
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | corecount: 8
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | event service: False
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | sizes: {0: 2298756, 4: 2299018, 11: 2299046, 70052: 2355592, 70053: 2355591, 70058: 2365432, 70059: 2365616, 70065: 2365862}
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | --------------------------------------------------
[2025-11-25 01:00:09] 2025-11-25 05:59:07,038 | INFO     | 
[2025-11-25 01:00:09] 2025-11-25 05:59:07,039 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-25 01:00:09] 2025-11-25 05:59:07,051 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,052 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:00:09] 2025-11-25 05:59:07,053 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,054 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:00:09] 2025-11-25 05:59:07,054 | INFO     | job 6895352804 has completed (purged errors)
[2025-11-25 01:00:09] 2025-11-25 05:59:07,054 | INFO     | overall cleanup function is called
[2025-11-25 01:00:09] 2025-11-25 05:59:08,067 | INFO     | --- collectZombieJob: --- 10, [1126]
[2025-11-25 01:00:09] 2025-11-25 05:59:08,067 | INFO     | zombie collector waiting for pid 1126
[2025-11-25 01:00:09] 2025-11-25 05:59:08,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:00:09] 2025-11-25 05:59:08,067 | INFO     | collected zombie processes
[2025-11-25 01:00:09] 2025-11-25 05:59:08,068 | INFO     | will attempt to kill all subprocesses of pid=1126
[2025-11-25 01:00:09] 2025-11-25 05:59:08,212 | INFO     | process IDs to be killed: [1126] (in reverse order)
[2025-11-25 01:00:09] 2025-11-25 05:59:08,290 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:00:09] 2025-11-25 05:59:08,290 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:00:09] 2025-11-25 05:59:08,293 | INFO     | did not find any defunct processes belonging to 1126
[2025-11-25 01:00:09] 2025-11-25 05:59:08,295 | INFO     | did not find any defunct processes belonging to 1126
[2025-11-25 01:00:09] 2025-11-25 05:59:08,296 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:00:09] 2025-11-25 05:59:08,297 | INFO     | ready for new job
[2025-11-25 01:00:09] 2025-11-25 05:59:08,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:00:09] 2025-11-25 05:59:08,300 | INFO     | ***************************************
[2025-11-25 01:00:09] 2025-11-25 05:59:08,301 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:00:09] 2025-11-25 05:59:08,301 | INFO     | ***************************************
[2025-11-25 01:00:09] 2025-11-25 05:59:08,301 | INFO     | 
[2025-11-25 01:00:09] 2025-11-25 05:59:08,302 | INFO     | architecture information:
[2025-11-25 01:00:09] 2025-11-25 05:59:08,302 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:00:09] 2025-11-25 05:59:08,314 | INFO     | cat /etc/os-release:
[2025-11-25 01:00:09] NAME="CentOS Linux"
[2025-11-25 01:00:09] VERSION="7 (Core)"
[2025-11-25 01:00:09] ID="centos"
[2025-11-25 01:00:09] ID_LIKE="rhel fedora"
[2025-11-25 01:00:09] VERSION_ID="7"
[2025-11-25 01:00:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:00:09] ANSI_COLOR="0;31"
[2025-11-25 01:00:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:00:09] HOME_URL="https://www.centos.org/"
[2025-11-25 01:00:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:00:09] 
[2025-11-25 01:00:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:00:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:00:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:00:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:00:09] 
[2025-11-25 01:00:09] 2025-11-25 05:59:08,314 | INFO     | ***************************************
[2025-11-25 01:00:09] 2025-11-25 05:59:08,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-25 01:00:09] 2025-11-25 05:59:08,828 | INFO     | sufficient remaining disk space (25675431936 B)
[2025-11-25 01:00:09] 2025-11-25 05:59:08,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:00:09] 2025-11-25 05:59:08,847 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:00:09] 2025-11-25 05:59:08,847 | INFO     | update_server=False
[2025-11-25 01:00:09] 2025-11-25 05:59:08,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:00:09] 2025-11-25 05:59:08,847 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:00:09] 2025-11-25 05:59:08,891 | INFO     | all payload control threads have been joined
[2025-11-25 01:00:09] 2025-11-25 05:59:09,245 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 01:00:09] 2025-11-25 05:59:09,245 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 01:00:09] 2025-11-25 05:59:09,245 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:00:09] 2025-11-25 05:59:09,245 | INFO     | will abort loop
[2025-11-25 01:00:09] 2025-11-25 05:59:09,853 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:09,853 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:09,892 | INFO     | [payload] control thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:09,898 | INFO     | all data control threads have been joined
[2025-11-25 01:00:09] 2025-11-25 05:59:09,998 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:00:09] 2025-11-25 05:59:10,217 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,251 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,290 | INFO     | all job control threads have been joined
[2025-11-25 01:00:09] 2025-11-25 05:59:10,351 | INFO     | [job] validate thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,354 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,359 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,390 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,511 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:10,904 | INFO     | [data] control thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:11,195 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:11,278 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:00:09] 2025-11-25 05:59:11,295 | INFO     | [job] control thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:11,355 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:12,003 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:15,283 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:00:09] 2025-11-25 05:59:38,886 | INFO     | PID=17469 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 01:00:09] 2025-11-25 05:59:38,886 | INFO     | .. there are 2 such processes running
[2025-11-25 01:00:09] 2025-11-25 05:59:38,887 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:00:09] 2025-11-25 05:59:38,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:00:09] 2025-11-25 05:59:38,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:00:09] 2025-11-25 06:00:02,218 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:00:09] 2025-11-25 06:00:03,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140151645693760)>', '<ExcThread(monitor, started 140151208531712)>']
[2025-11-25 01:00:09] 2025-11-25 06:00:04,012 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:00:09] 2025-11-25 06:00:04,012 | INFO     | [monitor] control thread has ended
[2025-11-25 01:00:09] 2025-11-25 06:00:08,959 | INFO     | all workflow threads have been joined
[2025-11-25 01:00:09] 2025-11-25 06:00:08,959 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:00:09] 2025-11-25 06:00:08,959 | INFO     | traces error code: 0
[2025-11-25 01:00:09] 2025-11-25 06:00:08,959 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:00:09] 2025-11-25 06:00:09,051 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:00:09] 2025-11-25 06:00:09,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:00:09] 2025-11-25 06:00:09,055 [wrapper] pilotpid: 17469
[2025-11-25 01:00:09] 2025-11-25 06:00:09,057 [wrapper] Pilot exit status: 0
[2025-11-25 01:00:09] 2025-11-25 06:00:09,063 [wrapper] pandaids: 6895352804
[2025-11-25 01:00:09] 2025-11-25 06:00:09,091 [wrapper] cleanup supervisor_pilot  1342 17470
[2025-11-25 01:00:09] 2025-11-25 06:00:09,093 [wrapper] Test setup, not cleaning
[2025-11-25 01:00:09] 2025-11-25 06:00:09,095 [wrapper] apfmon messages muted
[2025-11-25 01:00:09] 2025-11-25 06:00:09,097 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:00:09] 2025-11-25 06:00:09,099 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:00:09]  *** Error codes and diagnostics ***
[2025-11-25 01:00:09]     "exeErrorCode": 0,
[2025-11-25 01:00:09]     "exeErrorDiag": "",
[2025-11-25 01:00:09]     "pilotErrorCode": 0,
[2025-11-25 01:00:09]     "pilotErrorDiag": "",
[2025-11-25 01:00:09]  *** Listing of results directory ***
[2025-11-25 01:00:09] total 1336900
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 22 22:47 pilot3.tar.gz
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 22 22:53 queuedata.json
[2025-11-25 01:00:09] -rwx------ 1 boincer umatlas     36292 Nov 22 22:54 runpilot2-wrapper.sh
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas       100 Nov 24 05:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:00:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 05:30 run_atlas
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas       105 Nov 24 05:30 job.xml
[2025-11-25 01:00:09] -rw-r--r-- 2 boincer umatlas 410422169 Nov 24 05:30 EVNT.47483658._000603.pool.root.1
[2025-11-25 01:00:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 05:30 start_atlas.sh
[2025-11-25 01:00:09] drwxrwx--x 2 boincer umatlas      4096 Nov 24 05:30 shared
[2025-11-25 01:00:09] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 05:30 input.tar.gz
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas         0 Nov 24 05:30 boinc_lockfile
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 05:30 pandaJob.out
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas        57 Nov 24 05:30 setup.sh.local
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas    989824 Nov 24 05:31 agis_schedconf.cvmfs.json
[2025-11-25 01:00:09] drwx------ 5 boincer umatlas      4096 Nov 24 05:31 pilot3
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas       533 Nov 25 00:44 boinc_task_state.xml
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas      5953 Nov 25 00:58 init_data.xml
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas 930605462 Nov 25 00:58 HITS.47556137._005990.pool.root.1
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas      1064 Nov 25 00:58 memory_monitor_summary.json
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas   1516227 Nov 25 00:58 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas   2319175 Nov 25 00:58 log.47556137._005990.job.log.tgz.1
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas      8655 Nov 25 00:59 heartbeat.json
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas        95 Nov 25 00:59 pilot_heartbeat.json
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 25 01:00 boinc_mmap_file
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas        29 Nov 25 01:00 wrapper_checkpoint.txt
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas      5007 Nov 25 01:00 pilotlog.txt
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas   9703055 Nov 25 01:00 log.47556137._005990.job.log.1
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas       353 Nov 25 01:00 output.list
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas       620 Nov 25 01:00 runtime_log
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas  12042240 Nov 25 01:00 result.tar.gz
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 25 01:00 runtime_log.err
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas       668 Nov 25 01:00 g4wMDmWMGh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXQIKDmYZp2Un.diag
[2025-11-25 01:00:09] -rw-r--r-- 1 boincer umatlas     21119 Nov 25 01:00 stderr.txt
[2025-11-25 01:00:09] HITS file was successfully produced:
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas 930605462 Nov 25 00:58 shared/HITS.pool.root.1
[2025-11-25 01:00:09]  *** Contents of shared directory: ***
[2025-11-25 01:00:09] total 1321960
[2025-11-25 01:00:09] -rw-r--r-- 2 boincer umatlas 410422169 Nov 24 05:30 ATLAS.root_0
[2025-11-25 01:00:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 05:30 start_atlas.sh
[2025-11-25 01:00:09] -rw-r--r-- 2 boincer umatlas    590102 Nov 24 05:30 input.tar.gz
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas 930605462 Nov 25 00:58 HITS.pool.root.1
[2025-11-25 01:00:09] -rw------- 1 boincer umatlas  12042240 Nov 25 01:00 result.tar.gz
01:00:10 (11374): run_atlas exited; CPU time 542218.727404
01:00:10 (11374): called boinc_finish(0)

</stderr_txt>
]]>

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