Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:38:20 (22269): wrapper (7.7.26015): starting
02:38:20 (22269): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 02:38:20] Arguments: --nthreads 8
[2025-11-27 02:38:20] Threads: 8
[2025-11-27 02:38:20] Checking for CVMFS
[2025-11-27 02:38:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 02:38:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 02:38:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 02:38:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 02:38:23] 2.11.2.0 18458 285998 144100 153342 3 85 22842433 25165824 1288 130560 12 126983726 99.878 77649223 2892 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 02:38:23] CVMFS is ok
[2025-11-27 02:38:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 02:38:23] Checking for apptainer binary...
[2025-11-27 02:38:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 02:38:23] Running /usr/bin/apptainer --version
[2025-11-27 02:38:23] apptainer version 1.3.2-1.el7
[2025-11-27 02:38:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 02:38:41] cg-vwn434.simple-grid.lan
[2025-11-27 02:38:41] apptainer works
[2025-11-27 02:38:41] Set ATHENA_PROC_NUMBER=8
[2025-11-27 02:38:41] Set ATHENA_CORE_NUMBER=8
[2025-11-27 02:38:41] Starting ATLAS job with PandaID=6895361843
[2025-11-27 02:38:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 02:03:00]  *** The last 200 lines of the pilot log: ***
[2025-11-28 02:03:00] 2025-11-28 01:02:00,943 | INFO     | monitor loop #5658: job 0:6895361843 is in state 'finished'
[2025-11-28 02:03:00] 2025-11-28 01:02:00,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:03:00] 2025-11-28 01:02:01,947 | INFO     | time since job start (83976s) is within the limit (172800.0s)
[2025-11-28 02:03:00] 2025-11-28 01:02:03,450 | INFO     | monitor loop #5659: job 0:6895361843 is in state 'finished'
[2025-11-28 02:03:00] 2025-11-28 01:02:03,450 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:03:00] 2025-11-28 01:02:03,957 | INFO     | time since job start (83978s) is within the limit (172800.0s)
[2025-11-28 02:03:00] 2025-11-28 01:02:05,584 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 02:03:00] 2025-11-28 01:02:05,586 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 02:03:00] 2025-11-28 01:02:05,589 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6895361843/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 02:03:00] 2025-11-28 01:02:05,589 | INFO     | extracted standard info from prmon json
[2025-11-28 02:03:00] 2025-11-28 01:02:05,590 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 02:03:00] 2025-11-28 01:02:05,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 02:03:00] 2025-11-28 01:02:05,628 | INFO     | fitting pss+swap vs Time
[2025-11-28 02:03:00] 2025-11-28 01:02:05,647 | INFO     | sum of square deviations: 792107042346.641
[2025-11-28 02:03:00] 2025-11-28 01:02:05,732 | INFO     | sum of deviations: 3015117342726.096
[2025-11-28 02:03:00] 2025-11-28 01:02:05,733 | INFO     | mean x: 1764249930.0870519
[2025-11-28 02:03:00] 2025-11-28 01:02:05,733 | INFO     | mean y: 2853753.6378931967
[2025-11-28 02:03:00] 2025-11-28 01:02:05,733 | INFO     | intersect: -6712678714.486402
[2025-11-28 02:03:00] 2025-11-28 01:02:05,735 | INFO     | chi2: 16.08663218909271
[2025-11-28 02:03:00] 2025-11-28 01:02:05,737 | INFO     | sum of square deviations: 783447509943.2118
[2025-11-28 02:03:00] 2025-11-28 01:02:05,817 | INFO     | sum of deviations: 3471549459641.674
[2025-11-28 02:03:00] 2025-11-28 01:02:05,817 | INFO     | mean x: 1764249777.5910425
[2025-11-28 02:03:00] 2025-11-28 01:02:05,817 | INFO     | mean y: 2861791.0066079297
[2025-11-28 02:03:00] 2025-11-28 01:02:05,817 | INFO     | intersect: -7814739623.685583
[2025-11-28 02:03:00] 2025-11-28 01:02:05,819 | INFO     | chi2: 12.887485014095171
[2025-11-28 02:03:00] 2025-11-28 01:02:05,819 | INFO     | current chi2=12.887485014095171 (change=19.886991493264023 %)
[2025-11-28 02:03:00] 2025-11-28 01:02:05,819 | INFO     | right removable region: 1361
[2025-11-28 02:03:00] 2025-11-28 01:02:05,828 | INFO     | sum of square deviations: 783446603483.2101
[2025-11-28 02:03:00] 2025-11-28 01:02:05,902 | INFO     | sum of deviations: 2477127330368.5747
[2025-11-28 02:03:00] 2025-11-28 01:02:05,902 | INFO     | mean x: 1764250082.5910425
[2025-11-28 02:03:00] 2025-11-28 01:02:05,902 | INFO     | mean y: 2863225.8502202644
[2025-11-28 02:03:00] 2025-11-28 01:02:05,902 | INFO     | intersect: -5575400918.459066
[2025-11-28 02:03:00] 2025-11-28 01:02:05,904 | INFO     | chi2: 12.006077796963883
[2025-11-28 02:03:00] 2025-11-28 01:02:05,904 | INFO     | current chi2=12.006077796963883 (change=25.36611979538877 %)
[2025-11-28 02:03:00] 2025-11-28 01:02:05,906 | INFO     | sum of square deviations: 774849514644.7354
[2025-11-28 02:03:00] 2025-11-28 01:02:05,969 | INFO     | time since job start (83980s) is within the limit (172800.0s)
[2025-11-28 02:03:00] 2025-11-28 01:02:05,981 | INFO     | sum of deviations: 2057301457238.5374
[2025-11-28 02:03:00] 2025-11-28 01:02:05,982 | INFO     | mean x: 1764250235.0950627
[2025-11-28 02:03:00] 2025-11-28 01:02:05,982 | INFO     | mean y: 2870670.4686809136
[2025-11-28 02:03:00] 2025-11-28 01:02:05,986 | INFO     | intersect: -4681386738.221386
[2025-11-28 02:03:00] 2025-11-28 01:02:05,988 | INFO     | chi2: 9.584258137104237
[2025-11-28 02:03:00] 2025-11-28 01:02:05,988 | INFO     | current chi2=9.584258137104237 (change=20.171613917678254 %)
[2025-11-28 02:03:00] 2025-11-28 01:02:05,988 | INFO     | left removable region: 20
[2025-11-28 02:03:00] 2025-11-28 01:02:05,990 | INFO     | sum of square deviations: 747763910457.8094
[2025-11-28 02:03:00] 2025-11-28 01:02:06,008 | INFO     | monitor loop #5660: job 0:6895361843 is in state 'finished'
[2025-11-28 02:03:00] 2025-11-28 01:02:06,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 02:03:00] 2025-11-28 01:02:06,059 | INFO     | sum of deviations: 2449065822577.552
[2025-11-28 02:03:00] 2025-11-28 01:02:06,059 | INFO     | mean x: 1764250357.0991797
[2025-11-28 02:03:00] 2025-11-28 01:02:06,059 | INFO     | mean y: 2883741.409395973
[2025-11-28 02:03:00] 2025-11-28 01:02:06,059 | INFO     | intersect: -5775364167.608445
[2025-11-28 02:03:00] 2025-11-28 01:02:06,061 | INFO     | chi2: 5.44483879159334
[2025-11-28 02:03:00] 2025-11-28 01:02:06,061 | INFO     | current memory leak: 3.28 B/s (using 1341 data points, chi2=5.44)
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | ..............................
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . Timing measurements:
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . get job = 0 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . initial setup = 10 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . payload setup = 162 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . stage-in = 0 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . payload execution = 83511 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . stage-out = 3 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,063 | INFO     | . log creation = 0 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,064 | INFO     | ..............................
[2025-11-28 02:03:00] 2025-11-28 01:02:06,220 | INFO     | 
[2025-11-28 02:03:00] 2025-11-28 01:02:06,220 | INFO     | job summary report
[2025-11-28 02:03:00] 2025-11-28 01:02:06,220 | INFO     | --------------------------------------------------
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | PanDA job id: 6895361843
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | task id: 47556137
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | errors: (none)
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | pilot state: finished 
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | transexitcode: 0
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | exeerrorcode: 0
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | exeerrordiag: 
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | exitcode: 0
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | exitmsg: OK
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | cpuconsumptiontime: 317314 s
[2025-11-28 02:03:00] 2025-11-28 01:02:06,221 | INFO     | nevents: 1000
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | neventsw: 0
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | pid: 32646
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | pgrp: 32646
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | corecount: 8
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | event service: False
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | sizes: {0: 2283486, 1: 2284171, 2: 2284370, 13: 2284370, 24: 2284426, 34: 2284454, 45: 2284610, 56: 2284638, 67: 2284666, 77: 2284694, 88: 2284750, 92: 2285320, 99
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | --------------------------------------------------
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | 
[2025-11-28 02:03:00] 2025-11-28 01:02:06,222 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,801 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 02:03:00] 2025-11-28 01:02:06,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,802 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 02:03:00] 2025-11-28 01:02:06,802 | INFO     | job 6895361843 has completed (purged errors)
[2025-11-28 02:03:00] 2025-11-28 01:02:06,802 | INFO     | overall cleanup function is called
[2025-11-28 02:03:00] 2025-11-28 01:02:07,817 | INFO     | --- collectZombieJob: --- 10, [32646]
[2025-11-28 02:03:00] 2025-11-28 01:02:07,817 | INFO     | zombie collector waiting for pid 32646
[2025-11-28 02:03:00] 2025-11-28 01:02:07,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 02:03:00] 2025-11-28 01:02:07,818 | INFO     | collected zombie processes
[2025-11-28 02:03:00] 2025-11-28 01:02:07,818 | INFO     | will attempt to kill all subprocesses of pid=32646
[2025-11-28 02:03:00] 2025-11-28 01:02:07,933 | INFO     | process IDs to be killed: [32646] (in reverse order)
[2025-11-28 02:03:00] 2025-11-28 01:02:08,826 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 02:03:00] 2025-11-28 01:02:08,826 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 02:03:00] 2025-11-28 01:02:08,829 | INFO     | did not find any defunct processes belonging to 32646
[2025-11-28 02:03:00] 2025-11-28 01:02:08,831 | INFO     | did not find any defunct processes belonging to 32646
[2025-11-28 02:03:00] 2025-11-28 01:02:08,903 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 02:03:00] 2025-11-28 01:02:08,904 | INFO     | ready for new job
[2025-11-28 02:03:00] 2025-11-28 01:02:08,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 02:03:00] 2025-11-28 01:02:08,909 | INFO     | ***************************************
[2025-11-28 02:03:00] 2025-11-28 01:02:08,909 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 02:03:00] 2025-11-28 01:02:08,909 | INFO     | ***************************************
[2025-11-28 02:03:00] 2025-11-28 01:02:08,910 | INFO     | 
[2025-11-28 02:03:00] 2025-11-28 01:02:08,910 | INFO     | pilot is running in a VM
[2025-11-28 02:03:00] 2025-11-28 01:02:08,910 | INFO     | architecture information:
[2025-11-28 02:03:00] 2025-11-28 01:02:08,925 | INFO     | executing command: cat /etc/os-release
[2025-11-28 02:03:00] 2025-11-28 01:02:09,222 | INFO     | cat /etc/os-release:
[2025-11-28 02:03:00] NAME="CentOS Linux"
[2025-11-28 02:03:00] VERSION="7 (Core)"
[2025-11-28 02:03:00] ID="centos"
[2025-11-28 02:03:00] ID_LIKE="rhel fedora"
[2025-11-28 02:03:00] VERSION_ID="7"
[2025-11-28 02:03:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 02:03:00] ANSI_COLOR="0;31"
[2025-11-28 02:03:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 02:03:00] HOME_URL="https://www.centos.org/"
[2025-11-28 02:03:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 02:03:00] 
[2025-11-28 02:03:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 02:03:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 02:03:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 02:03:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 02:03:00] 
[2025-11-28 02:03:00] 2025-11-28 01:02:09,222 | INFO     | ***************************************
[2025-11-28 02:03:00] 2025-11-28 01:02:09,725 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-28 02:03:00] 2025-11-28 01:02:09,935 | INFO     | sufficient remaining disk space (494772682752 B)
[2025-11-28 02:03:00] 2025-11-28 01:02:09,935 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 02:03:00] 2025-11-28 01:02:09,935 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 02:03:00] 2025-11-28 01:02:09,935 | INFO     | update_server=False
[2025-11-28 02:03:00] 2025-11-28 01:02:09,935 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 02:03:00] 2025-11-28 01:02:09,941 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 02:03:00] 2025-11-28 01:02:09,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:03:00] 2025-11-28 01:02:09,946 | INFO     | aborting loop
[2025-11-28 02:03:00] 2025-11-28 01:02:09,947 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 02:03:00] 2025-11-28 01:02:10,335 | INFO     | all payload control threads have been joined
[2025-11-28 02:03:00] 2025-11-28 01:02:10,508 | INFO     | all data control threads have been joined
[2025-11-28 02:03:00] 2025-11-28 01:02:10,941 | INFO     | [job] retrieve thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:10,952 | INFO     | [job] job monitor thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,176 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,210 | INFO     | [payload] validate_post thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 02:03:00] 2025-11-28 01:02:11,340 | INFO     | [payload] control thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,463 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,514 | INFO     | [data] control thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,553 | INFO     | all job control threads have been joined
[2025-11-28 02:03:00] 2025-11-28 01:02:11,611 | INFO     | [job] validate thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,892 | INFO     | [data] copytool_in thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,896 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:11,953 | INFO     | [data] copytool_out thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:12,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:12,247 | INFO     | [job] queue monitor thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:12,258 | INFO     | [payload] failed_post thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:12,559 | INFO     | [job] control thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:13,950 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 02:03:00] 2025-11-28 01:02:39,143 | INFO     | PID=26070 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 02:03:00] 2025-11-28 01:02:39,144 | INFO     | .. there are 9 such processes running
[2025-11-28 02:03:00] 2025-11-28 01:02:39,144 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 02:03:00] 2025-11-28 01:02:39,144 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 02:03:00] 2025-11-28 01:02:39,144 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 02:03:00] 2025-11-28 01:02:51,046 | INFO     | [monitor] cgroup control has ended
[2025-11-28 02:03:00] 2025-11-28 01:02:52,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139918611605312)>', '<ExcThread(monitor, started 139918315595520)>']
[2025-11-28 02:03:00] 2025-11-28 01:02:52,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 02:03:00] 2025-11-28 01:02:52,219 | INFO     | [monitor] control thread has ended
[2025-11-28 02:03:00] 2025-11-28 01:02:57,108 | INFO     | all workflow threads have been joined
[2025-11-28 02:03:00] 2025-11-28 01:02:57,108 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 02:03:00] 2025-11-28 01:02:57,109 | INFO     | traces error code: 0
[2025-11-28 02:03:00] 2025-11-28 01:02:57,109 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 02:03:00] 2025-11-28 01:02:57,383 [wrapper] ==== pilot stdout END ====
[2025-11-28 02:03:00] 2025-11-28 01:02:57,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 02:03:00] 2025-11-28 01:02:57,575 [wrapper] pilotpid: 26070
[2025-11-28 02:03:00] 2025-11-28 01:02:57,674 [wrapper] Pilot exit status: 0
[2025-11-28 02:03:00] 2025-11-28 01:02:58,061 [wrapper] pandaids: 6895361843
[2025-11-28 02:03:00] 2025-11-28 01:02:58,727 [wrapper] cleanup supervisor_pilot  3506 26071
[2025-11-28 02:03:00] 2025-11-28 01:02:58,771 [wrapper] Test setup, not cleaning
[2025-11-28 02:03:00] 2025-11-28 01:02:58,843 [wrapper] apfmon messages muted
[2025-11-28 02:03:00] 2025-11-28 01:02:58,884 [wrapper] ==== wrapper stdout END ====
[2025-11-28 02:03:00] 2025-11-28 01:02:58,926 [wrapper] ==== wrapper stderr END ====
[2025-11-28 02:03:00]  *** Error codes and diagnostics ***
[2025-11-28 02:03:00]     "exeErrorCode": 0,
[2025-11-28 02:03:00]     "exeErrorDiag": "",
[2025-11-28 02:03:00]     "pilotErrorCode": 0,
[2025-11-28 02:03:00]     "pilotErrorDiag": "",
[2025-11-28 02:03:00]  *** Listing of results directory ***
[2025-11-28 02:03:00] total 1318872
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc    576529 Nov 23 15:16 pilot3.tar.gz
[2025-11-28 02:03:00] -rwx------. 1 boinc boinc     36292 Nov 23 15:37 runpilot2-wrapper.sh
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc      5112 Nov 23 15:38 queuedata.json
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc       100 Nov 27 02:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 02:03:00] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 02:38 run_atlas
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc       105 Nov 27 02:38 job.xml
[2025-11-28 02:03:00] -rw-r--r--. 2 boinc boinc 406625929 Nov 27 02:38 EVNT.47483658._000766.pool.root.1
[2025-11-28 02:03:00] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:38 start_atlas.sh
[2025-11-28 02:03:00] drwxrwx--x. 2 boinc boinc        68 Nov 27 02:38 shared
[2025-11-28 02:03:00] -rw-r--r--. 2 boinc boinc    590099 Nov 27 02:38 input.tar.gz
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc      6392 Nov 27 02:38 init_data.xml
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc         0 Nov 27 02:38 boinc_lockfile
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc      2785 Nov 27 02:38 pandaJob.out
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc    991530 Nov 27 02:42 agis_schedconf.cvmfs.json
[2025-11-28 02:03:00] drwx------. 5 boinc boinc      4096 Nov 27 02:42 pilot3
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc       533 Nov 28 01:44 boinc_task_state.xml
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc 912801422 Nov 28 01:59 HITS.47556137._007617.pool.root.1
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc      1029 Nov 28 02:00 memory_monitor_summary.json
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc   1516240 Nov 28 02:00 agis_ddmendpoints.agis.ALL.json
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc   2442364 Nov 28 02:00 log.47556137._007617.job.log.tgz.1
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc        95 Nov 28 02:02 pilot_heartbeat.json
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc      8624 Nov 28 02:02 heartbeat.json
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc      8192 Nov 28 02:02 boinc_mmap_file
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc        29 Nov 28 02:02 wrapper_checkpoint.txt
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc      4884 Nov 28 02:02 pilotlog.txt
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc  11153308 Nov 28 02:02 log.47556137._007617.job.log.1
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc       353 Nov 28 02:03 output.list
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc       620 Nov 28 02:03 runtime_log
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc  13619200 Nov 28 02:03 result.tar.gz
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc      8817 Nov 28 02:03 runtime_log.err
[2025-11-28 02:03:00] -rw-------. 1 boinc boinc       662 Nov 28 02:03 P1jNDm0OQh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3ZIKDmj5B96n.diag
[2025-11-28 02:03:00] -rw-r--r--. 1 boinc boinc     21226 Nov 28 02:03 stderr.txt
[2025-11-28 02:03:00] HITS file was successfully produced:
[2025-11-28 02:03:01] -rw-------. 1 boinc boinc 912801422 Nov 28 01:59 shared/HITS.pool.root.1
[2025-11-28 02:03:01]  *** Contents of shared directory: ***
[2025-11-28 02:03:01] total 1302400
[2025-11-28 02:03:01] -rw-r--r--. 2 boinc boinc 406625929 Nov 27 02:38 ATLAS.root_0
[2025-11-28 02:03:01] -rw-r--r--. 2 boinc boinc     15847 Nov 27 02:38 start_atlas.sh
[2025-11-28 02:03:01] -rw-r--r--. 2 boinc boinc    590099 Nov 27 02:38 input.tar.gz
[2025-11-28 02:03:01] -rw-------. 1 boinc boinc 912801422 Nov 28 01:59 HITS.pool.root.1
[2025-11-28 02:03:01] -rw-------. 1 boinc boinc  13619200 Nov 28 02:03 result.tar.gz
02:03:02 (22269): run_atlas exited; CPU time 317881.708717
02:03:02 (22269): called boinc_finish(0)

</stderr_txt>
]]>

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