Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:45:14 (32725): wrapper (7.7.26015): starting
04:45:14 (32725): wrapper: running run_atlas (--nthreads 12)
[2025-11-24 04:45:14] Arguments: --nthreads 12
[2025-11-24 04:45:14] Threads: 12
[2025-11-24 04:45:14] Checking for CVMFS
[2025-11-24 04:45:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:45:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:45:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:45:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:45:14] 2.11.2.0 2998 284592 92180 153240 0 82 14120415 20275201 1 130560 1 128234758 99.967 16794425 14462 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:45:14] CVMFS is ok
[2025-11-24 04:45:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:45:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:45:14] Further information can be found at the LHC@home message board.
[2025-11-24 04:45:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:45:14] Checking for apptainer binary...
[2025-11-24 04:45:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:45:14] Running /usr/bin/apptainer --version
[2025-11-24 04:45:14] apptainer version 1.3.2-1.el7
[2025-11-24 04:45:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:45:15] c-205-25.aglt2.org
[2025-11-24 04:45:15] apptainer works
[2025-11-24 04:45:15] Set ATHENA_PROC_NUMBER=12
[2025-11-24 04:45:15] Set ATHENA_CORE_NUMBER=12
[2025-11-24 04:45:15] Starting ATLAS job with PandaID=6895359082
[2025-11-24 04:45:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 11:58:18]  *** The last 200 lines of the pilot log: ***
[2025-11-24 11:58:18] 2025-11-24 16:57:16,523 | INFO     | monitor loop #1939: job 0:6895359082 is in state 'finished'
[2025-11-24 11:58:18] 2025-11-24 16:57:16,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,289 | INFO     | time since job start (25907s) is within the limit (172800.0s)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,331 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 11:58:18] 2025-11-24 16:57:18,334 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-24 11:58:18] 2025-11-24 16:57:18,336 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895359082/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,337 | INFO     | extracted standard info from prmon json
[2025-11-24 11:58:18] 2025-11-24 16:57:18,337 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 11:58:18] 2025-11-24 16:57:18,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 11:58:18] 2025-11-24 16:57:18,344 | INFO     | fitting pss+swap vs Time
[2025-11-24 11:58:18] 2025-11-24 16:57:18,344 | INFO     | sum of square deviations: 23803844276.48482
[2025-11-24 11:58:18] 2025-11-24 16:57:18,348 | INFO     | sum of deviations: 315867621957.83325
[2025-11-24 11:58:18] 2025-11-24 16:57:18,348 | INFO     | mean x: 1763990492.2635293
[2025-11-24 11:58:18] 2025-11-24 16:57:18,348 | INFO     | mean y: 3420771.7247058824
[2025-11-24 11:58:18] 2025-11-24 16:57:18,348 | INFO     | intersect: -23404037094.143593
[2025-11-24 11:58:18] 2025-11-24 16:57:18,349 | INFO     | chi2: 6.473409201278205
[2025-11-24 11:58:18] 2025-11-24 16:57:18,350 | INFO     | sum of square deviations: 22973593101.133377
[2025-11-24 11:58:18] 2025-11-24 16:57:18,353 | INFO     | sum of deviations: 477735019216.0667
[2025-11-24 11:58:18] 2025-11-24 16:57:18,353 | INFO     | mean x: 1763990339.7666667
[2025-11-24 11:58:18] 2025-11-24 16:57:18,353 | INFO     | mean y: 3450464.8476190474
[2025-11-24 11:58:18] 2025-11-24 16:57:18,354 | INFO     | intersect: -36678663436.77841
[2025-11-24 11:58:18] 2025-11-24 16:57:18,354 | INFO     | chi2: 3.4575945257553236
[2025-11-24 11:58:18] 2025-11-24 16:57:18,354 | INFO     | current chi2=3.4575945257553236 (change=46.58773424870769 %)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,355 | INFO     | sum of square deviations: 22162877175.77357
[2025-11-24 11:58:18] 2025-11-24 16:57:18,358 | INFO     | sum of deviations: 553092977753.2528
[2025-11-24 11:58:18] 2025-11-24 16:57:18,358 | INFO     | mean x: 1763990187.2698796
[2025-11-24 11:58:18] 2025-11-24 16:57:18,359 | INFO     | mean y: 3464610.060240964
[2025-11-24 11:58:18] 2025-11-24 16:57:18,359 | INFO     | intersect: -44018373243.69584
[2025-11-24 11:58:18] 2025-11-24 16:57:18,359 | INFO     | chi2: 2.6438824932032494
[2025-11-24 11:58:18] 2025-11-24 16:57:18,359 | INFO     | current chi2=2.6438824932032494 (change=23.53405023321281 %)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,359 | INFO     | right removable region: 414
[2025-11-24 11:58:18] 2025-11-24 16:57:18,360 | INFO     | sum of square deviations: 22973524781.13336
[2025-11-24 11:58:18] 2025-11-24 16:57:18,364 | INFO     | sum of deviations: 170594191034.73322
[2025-11-24 11:58:18] 2025-11-24 16:57:18,364 | INFO     | mean x: 1763990644.7666667
[2025-11-24 11:58:18] 2025-11-24 16:57:18,364 | INFO     | mean y: 3447379.966666667
[2025-11-24 11:58:18] 2025-11-24 16:57:18,364 | INFO     | intersect: -13095393999.565048
[2025-11-24 11:58:18] 2025-11-24 16:57:18,365 | INFO     | chi2: 4.028986200810078
[2025-11-24 11:58:18] 2025-11-24 16:57:18,365 | INFO     | current chi2=4.028986200810078 (change=37.76098381028446 %)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,365 | INFO     | sum of square deviations: 22162740535.77357
[2025-11-24 11:58:18] 2025-11-24 16:57:18,369 | INFO     | sum of deviations: 139079745937.85788
[2025-11-24 11:58:18] 2025-11-24 16:57:18,369 | INFO     | mean x: 1763990797.2698796
[2025-11-24 11:58:18] 2025-11-24 16:57:18,369 | INFO     | mean y: 3453299.956626506
[2025-11-24 11:58:18] 2025-11-24 16:57:18,369 | INFO     | intersect: -11066269396.341274
[2025-11-24 11:58:18] 2025-11-24 16:57:18,370 | INFO     | chi2: 3.9719558916909876
[2025-11-24 11:58:18] 2025-11-24 16:57:18,370 | INFO     | current chi2=3.9719558916909876 (change=1.4155002344665109 %)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,370 | INFO     | left removable region: 20
[2025-11-24 11:58:18] 2025-11-24 16:57:18,370 | INFO     | sum of square deviations: 18965795893.441654
[2025-11-24 11:58:18] 2025-11-24 16:57:18,374 | INFO     | sum of deviations: 341729842387.335
[2025-11-24 11:58:18] 2025-11-24 16:57:18,374 | INFO     | mean x: 1763990766.7715735
[2025-11-24 11:58:18] 2025-11-24 16:57:18,374 | INFO     | mean y: 3507577.1370558375
[2025-11-24 11:58:18] 2025-11-24 16:57:18,374 | INFO     | intersect: -31780462370.046356
[2025-11-24 11:58:18] 2025-11-24 16:57:18,375 | INFO     | chi2: 0.06516636006685146
[2025-11-24 11:58:18] 2025-11-24 16:57:18,375 | INFO     | current memory leak: 18.02 B/s (using 394 data points, chi2=0.07)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,375 | INFO     | could have reported an average CPU frequency of 2391 MHz (18 samples)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,375 | INFO     | ..............................
[2025-11-24 11:58:18] 2025-11-24 16:57:18,375 | INFO     | . Timing measurements:
[2025-11-24 11:58:18] 2025-11-24 16:57:18,375 | INFO     | . get job = 0 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | . initial setup = 2 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | . payload setup = 7 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | . stage-in = 0 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | . payload execution = 25869 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | . stage-out = 3 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | . log creation = 0 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,376 | INFO     | ..............................
[2025-11-24 11:58:18] 2025-11-24 16:57:18,777 | INFO     | 
[2025-11-24 11:58:18] 2025-11-24 16:57:18,778 | INFO     | job summary report
[2025-11-24 11:58:18] 2025-11-24 16:57:18,778 | INFO     | --------------------------------------------------
[2025-11-24 11:58:18] 2025-11-24 16:57:18,778 | INFO     | PanDA job id: 6895359082
[2025-11-24 11:58:18] 2025-11-24 16:57:18,778 | INFO     | task id: 47556137
[2025-11-24 11:58:18] 2025-11-24 16:57:18,779 | INFO     | errors: (none)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,779 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 11:58:18] 2025-11-24 16:57:18,779 | INFO     | pilot state: finished 
[2025-11-24 11:58:18] 2025-11-24 16:57:18,779 | INFO     | transexitcode: 0
[2025-11-24 11:58:18] 2025-11-24 16:57:18,779 | INFO     | exeerrorcode: 0
[2025-11-24 11:58:18] 2025-11-24 16:57:18,779 | INFO     | exeerrordiag: 
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | exitcode: 0
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | exitmsg: OK
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | cpuconsumptiontime: 295881 s
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | nevents: 1000
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | neventsw: 0
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | pid: 10502
[2025-11-24 11:58:18] 2025-11-24 16:57:18,780 | INFO     | pgrp: 10502
[2025-11-24 11:58:18] 2025-11-24 16:57:18,781 | INFO     | corecount: 12
[2025-11-24 11:58:18] 2025-11-24 16:57:18,781 | INFO     | event service: False
[2025-11-24 11:58:18] 2025-11-24 16:57:18,781 | INFO     | sizes: {0: 2298580, 1: 2298835, 6: 2299097, 12: 2299125, 25881: 2336390, 25885: 2346175, 25886: 2346359, 25892: 2346605}
[2025-11-24 11:58:18] 2025-11-24 16:57:18,781 | INFO     | --------------------------------------------------
[2025-11-24 11:58:18] 2025-11-24 16:57:18,781 | INFO     | 
[2025-11-24 11:58:18] 2025-11-24 16:57:18,782 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 11:58:18] 2025-11-24 16:57:18,805 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,805 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,805 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,805 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,808 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 11:58:18] 2025-11-24 16:57:18,808 | INFO     | job 6895359082 has completed (purged errors)
[2025-11-24 11:58:18] 2025-11-24 16:57:18,808 | INFO     | overall cleanup function is called
[2025-11-24 11:58:18] 2025-11-24 16:57:19,825 | INFO     | --- collectZombieJob: --- 10, [10502]
[2025-11-24 11:58:18] 2025-11-24 16:57:19,825 | INFO     | zombie collector waiting for pid 10502
[2025-11-24 11:58:18] 2025-11-24 16:57:19,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 11:58:18] 2025-11-24 16:57:19,826 | INFO     | collected zombie processes
[2025-11-24 11:58:18] 2025-11-24 16:57:19,826 | INFO     | will attempt to kill all subprocesses of pid=10502
[2025-11-24 11:58:18] 2025-11-24 16:57:19,916 | INFO     | process IDs to be killed: [10502] (in reverse order)
[2025-11-24 11:58:18] 2025-11-24 16:57:19,969 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 11:58:18] 2025-11-24 16:57:19,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 11:58:18] 2025-11-24 16:57:19,973 | INFO     | did not find any defunct processes belonging to 10502
[2025-11-24 11:58:18] 2025-11-24 16:57:19,976 | INFO     | did not find any defunct processes belonging to 10502
[2025-11-24 11:58:18] 2025-11-24 16:57:19,978 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 11:58:18] 2025-11-24 16:57:19,978 | INFO     | ready for new job
[2025-11-24 11:58:18] 2025-11-24 16:57:19,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 11:58:18] 2025-11-24 16:57:19,981 | INFO     | ***************************************
[2025-11-24 11:58:18] 2025-11-24 16:57:19,981 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 11:58:18] 2025-11-24 16:57:19,981 | INFO     | ***************************************
[2025-11-24 11:58:18] 2025-11-24 16:57:19,981 | INFO     | 
[2025-11-24 11:58:18] 2025-11-24 16:57:19,982 | INFO     | architecture information:
[2025-11-24 11:58:18] 2025-11-24 16:57:19,982 | INFO     | executing command: cat /etc/os-release
[2025-11-24 11:58:18] 2025-11-24 16:57:19,997 | INFO     | cat /etc/os-release:
[2025-11-24 11:58:18] NAME="CentOS Linux"
[2025-11-24 11:58:18] VERSION="7 (Core)"
[2025-11-24 11:58:18] ID="centos"
[2025-11-24 11:58:18] ID_LIKE="rhel fedora"
[2025-11-24 11:58:18] VERSION_ID="7"
[2025-11-24 11:58:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 11:58:18] ANSI_COLOR="0;31"
[2025-11-24 11:58:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 11:58:18] HOME_URL="https://www.centos.org/"
[2025-11-24 11:58:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 11:58:18] 
[2025-11-24 11:58:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 11:58:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 11:58:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 11:58:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 11:58:18] 
[2025-11-24 11:58:18] 2025-11-24 16:57:19,998 | INFO     | ***************************************
[2025-11-24 11:58:18] 2025-11-24 16:57:20,501 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 11:58:18] 2025-11-24 16:57:20,518 | INFO     | sufficient remaining disk space (28241297408 B)
[2025-11-24 11:58:18] 2025-11-24 16:57:20,519 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 11:58:18] 2025-11-24 16:57:20,519 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 11:58:18] 2025-11-24 16:57:20,519 | INFO     | update_server=False
[2025-11-24 11:58:18] 2025-11-24 16:57:20,519 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 11:58:18] 2025-11-24 16:57:20,520 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:58:18] 2025-11-24 16:57:20,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 11:58:18] 2025-11-24 16:57:20,520 | INFO     | aborting loop
[2025-11-24 11:58:18] 2025-11-24 16:57:21,135 | INFO     | all payload control threads have been joined
[2025-11-24 11:58:18] 2025-11-24 16:57:21,457 | INFO     | all job control threads have been joined
[2025-11-24 11:58:18] 2025-11-24 16:57:21,525 | INFO     | [job] retrieve thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:21,526 | INFO     | [job] job monitor thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:21,550 | INFO     | all data control threads have been joined
[2025-11-24 11:58:18] 2025-11-24 16:57:21,585 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:21,681 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:21,905 | INFO     | [payload] validate_post thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,141 | INFO     | [payload] control thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,200 | INFO     | [data] copytool_in thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,463 | INFO     | [job] control thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,522 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,522 | INFO     | [data] copytool_out thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,524 | INFO     | [payload] failed_post thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,555 | INFO     | [data] control thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:22,787 | INFO     | [job] validate thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:23,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 11:58:18] 2025-11-24 16:57:23,477 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:58:18] 2025-11-24 16:57:24,479 | INFO     | [job] queue monitor thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:27,230 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:31,075 | INFO     | job.realtimelogging is not enabled
[2025-11-24 11:58:18] 2025-11-24 16:57:32,080 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 11:58:18] 2025-11-24 16:57:51,492 | INFO     | PID=4131 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 11:58:18] 2025-11-24 16:57:51,493 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 11:58:18] 2025-11-24 16:57:51,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 11:58:18] 2025-11-24 16:57:51,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 11:58:18] 2025-11-24 16:58:13,228 | INFO     | [monitor] cgroup control has ended
[2025-11-24 11:58:18] 2025-11-24 16:58:13,316 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655999526720)>', '<ExcThread(monitor, started 140655305139968)>']
[2025-11-24 11:58:18] 2025-11-24 16:58:13,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 11:58:18] 2025-11-24 16:58:13,605 | INFO     | [monitor] control thread has ended
[2025-11-24 11:58:18] 2025-11-24 16:58:18,330 | INFO     | all workflow threads have been joined
[2025-11-24 11:58:18] 2025-11-24 16:58:18,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 11:58:18] 2025-11-24 16:58:18,336 | INFO     | traces error code: 0
[2025-11-24 11:58:18] 2025-11-24 16:58:18,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 11:58:18] 2025-11-24 16:58:18,433 [wrapper] ==== pilot stdout END ====
[2025-11-24 11:58:18] 2025-11-24 16:58:18,437 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 11:58:18] 2025-11-24 16:58:18,441 [wrapper] pilotpid: 4131
[2025-11-24 11:58:18] 2025-11-24 16:58:18,445 [wrapper] Pilot exit status: 0
[2025-11-24 11:58:18] 2025-11-24 16:58:18,460 [wrapper] pandaids: 6895359082
[2025-11-24 11:58:18] 2025-11-24 16:58:18,508 [wrapper] cleanup supervisor_pilot 28553 4132
[2025-11-24 11:58:18] 2025-11-24 16:58:18,512 [wrapper] Test setup, not cleaning
[2025-11-24 11:58:18] 2025-11-24 16:58:18,516 [wrapper] apfmon messages muted
[2025-11-24 11:58:18] 2025-11-24 16:58:18,520 [wrapper] ==== wrapper stdout END ====
[2025-11-24 11:58:18] 2025-11-24 16:58:18,524 [wrapper] ==== wrapper stderr END ====
[2025-11-24 11:58:18]  *** Error codes and diagnostics ***
[2025-11-24 11:58:18]     "exeErrorCode": 0,
[2025-11-24 11:58:18]     "exeErrorDiag": "",
[2025-11-24 11:58:18]     "pilotErrorCode": 0,
[2025-11-24 11:58:18]     "pilotErrorDiag": "",
[2025-11-24 11:58:18]  *** Listing of results directory ***
[2025-11-24 11:58:18] total 1315780
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 08:09 pilot3.tar.gz
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 08:18 queuedata.json
[2025-11-24 11:58:18] -rwx------ 1 boincer umatlas     36292 Nov 23 08:19 runpilot2-wrapper.sh
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas       100 Nov 24 04:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 11:58:18] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 04:45 run_atlas
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas       105 Nov 24 04:45 job.xml
[2025-11-24 11:58:18] -rw-r--r-- 2 boincer umatlas 413144593 Nov 24 04:45 EVNT.47483658._000746.pool.root.1
[2025-11-24 11:58:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:45 start_atlas.sh
[2025-11-24 11:58:18] drwxrwx--x 2 boincer umatlas      4096 Nov 24 04:45 shared
[2025-11-24 11:58:18] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 04:45 input.tar.gz
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas         0 Nov 24 04:45 boinc_lockfile
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas      2786 Nov 24 04:45 pandaJob.out
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas        57 Nov 24 04:45 setup.sh.local
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas    989824 Nov 24 04:45 agis_schedconf.cvmfs.json
[2025-11-24 11:58:18] drwx------ 5 boincer umatlas      4096 Nov 24 04:45 pilot3
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas       532 Nov 24 11:44 boinc_task_state.xml
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas      5956 Nov 24 11:54 init_data.xml
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas 918713934 Nov 24 11:56 HITS.47556137._007415.pool.root.1
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas      1062 Nov 24 11:57 memory_monitor_summary.json
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas   1516227 Nov 24 11:57 agis_ddmendpoints.agis.ALL.json
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas   2169691 Nov 24 11:57 log.47556137._007415.job.log.tgz.1
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas      8665 Nov 24 11:57 heartbeat.json
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas        95 Nov 24 11:57 pilot_heartbeat.json
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 11:58 boinc_mmap_file
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas        29 Nov 24 11:58 wrapper_checkpoint.txt
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas      4817 Nov 24 11:58 pilotlog.txt
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas   3621250 Nov 24 11:58 log.47556137._007415.job.log.1
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas       353 Nov 24 11:58 output.list
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas       620 Nov 24 11:58 runtime_log
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas   5806080 Nov 24 11:58 result.tar.gz
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas      9345 Nov 24 11:58 runtime_log.err
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas       670 Nov 24 11:58 J1OKDm4APh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpvKKDmCwkWHm.diag
[2025-11-24 11:58:18] -rw-r--r-- 1 boincer umatlas     21299 Nov 24 11:58 stderr.txt
[2025-11-24 11:58:18] HITS file was successfully produced:
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas 918713934 Nov 24 11:56 shared/HITS.pool.root.1
[2025-11-24 11:58:18]  *** Contents of shared directory: ***
[2025-11-24 11:58:18] total 1306924
[2025-11-24 11:58:18] -rw-r--r-- 2 boincer umatlas 413144593 Nov 24 04:45 ATLAS.root_0
[2025-11-24 11:58:18] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:45 start_atlas.sh
[2025-11-24 11:58:18] -rw-r--r-- 2 boincer umatlas    590099 Nov 24 04:45 input.tar.gz
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas 918713934 Nov 24 11:56 HITS.pool.root.1
[2025-11-24 11:58:18] -rw------- 1 boincer umatlas   5806080 Nov 24 11:58 result.tar.gz
11:58:20 (32725): run_atlas exited; CPU time 289275.800891
11:58:20 (32725): called boinc_finish(0)

</stderr_txt>
]]>

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