Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:43:16 (20999): wrapper (7.7.26015): starting
01:43:16 (20999): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:43:16] Arguments: --nthreads 8
[2025-11-27 01:43:16] Threads: 8
[2025-11-27 01:43:16] Checking for CVMFS
[2025-11-27 01:43:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:43:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:43:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:43:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:43:19] 2.11.2.0 20854 172910 136212 153341 0 85 20087753 25165824 1288 130560 10 58876580 99.886 28342615 2268 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-27 01:43:19] CVMFS is ok
[2025-11-27 01:43:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:43:19] Checking for apptainer binary...
[2025-11-27 01:43:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:43:19] Running /usr/bin/apptainer --version
[2025-11-27 01:43:20] apptainer version 1.3.2-1.el7
[2025-11-27 01:43:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:43:40] cg-vwn379.simple-grid.lan
[2025-11-27 01:43:40] apptainer works
[2025-11-27 01:43:40] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:43:40] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:43:40] Starting ATLAS job with PandaID=6895359099
[2025-11-27 01:43:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 01:25:23]  *** The last 200 lines of the pilot log: ***
[2025-11-28 01:25:23] 2025-11-28 00:24:08,744 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:25:23] 2025-11-28 00:24:10,092 | INFO     | time since job start (84986s) is within the limit (172800.0s)
[2025-11-28 01:25:23] 2025-11-28 00:24:11,252 | INFO     | monitor loop #5722: job 0:6895359099 is in state 'finished'
[2025-11-28 01:25:23] 2025-11-28 00:24:11,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:25:23] 2025-11-28 00:24:12,099 | INFO     | time since job start (84988s) is within the limit (172800.0s)
[2025-11-28 01:25:23] 2025-11-28 00:24:13,764 | INFO     | monitor loop #5723: job 0:6895359099 is in state 'finished'
[2025-11-28 01:25:23] 2025-11-28 00:24:13,765 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:25:23] 2025-11-28 00:24:14,112 | INFO     | time since job start (84990s) is within the limit (172800.0s)
[2025-11-28 01:25:23] 2025-11-28 00:24:16,121 | INFO     | time since job start (84992s) is within the limit (172800.0s)
[2025-11-28 01:25:23] 2025-11-28 00:24:16,269 | INFO     | monitor loop #5724: job 0:6895359099 is in state 'finished'
[2025-11-28 01:25:23] 2025-11-28 00:24:16,270 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:25:23] 2025-11-28 00:24:18,128 | INFO     | time since job start (84994s) is within the limit (172800.0s)
[2025-11-28 01:25:23] 2025-11-28 00:24:18,778 | INFO     | monitor loop #5725: job 0:6895359099 is in state 'finished'
[2025-11-28 01:25:23] 2025-11-28 00:24:18,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 01:25:23] 2025-11-28 00:24:20,142 | INFO     | time since job start (84996s) is within the limit (172800.0s)
[2025-11-28 01:25:23] 2025-11-28 00:24:20,780 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 01:25:23] 2025-11-28 00:24:20,780 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-28 01:25:23] 2025-11-28 00:24:20,782 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6895359099/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 01:25:23] 2025-11-28 00:24:20,783 | INFO     | extracted standard info from prmon json
[2025-11-28 01:25:23] 2025-11-28 00:24:20,783 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 01:25:23] 2025-11-28 00:24:20,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 01:25:23] 2025-11-28 00:24:20,843 | INFO     | fitting pss+swap vs Time
[2025-11-28 01:25:23] 2025-11-28 00:24:20,845 | INFO     | sum of square deviations: 820247075561.5264
[2025-11-28 01:25:23] 2025-11-28 00:24:20,929 | INFO     | sum of deviations: 3542160681989.769
[2025-11-28 01:25:23] 2025-11-28 00:24:20,929 | INFO     | mean x: 1764247147.0629067
[2025-11-28 01:25:23] 2025-11-28 00:24:20,930 | INFO     | mean y: 2841476.531453362
[2025-11-28 01:25:23] 2025-11-28 00:24:20,930 | INFO     | intersect: -7615895686.732102
[2025-11-28 01:25:23] 2025-11-28 00:24:20,931 | INFO     | chi2: 21.704133341857222
[2025-11-28 01:25:23] 2025-11-28 00:24:20,933 | INFO     | sum of square deviations: 811383255378.3579
[2025-11-28 01:25:23] 2025-11-28 00:24:20,997 | INFO     | sum of deviations: 4004701987508.226
[2025-11-28 01:25:23] 2025-11-28 00:24:20,997 | INFO     | mean x: 1764246994.5667634
[2025-11-28 01:25:23] 2025-11-28 00:24:20,998 | INFO     | mean y: 2849435.568214804
[2025-11-28 01:25:23] 2025-11-28 00:24:20,998 | INFO     | intersect: -8704852379.528158
[2025-11-28 01:25:23] 2025-11-28 00:24:20,999 | INFO     | chi2: 18.46111710182419
[2025-11-28 01:25:23] 2025-11-28 00:24:21,000 | INFO     | current chi2=18.46111710182419 (change=14.941929212067437 %)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,000 | INFO     | right removable region: 1377
[2025-11-28 01:25:23] 2025-11-28 00:24:21,002 | INFO     | sum of square deviations: 811382358678.3584
[2025-11-28 01:25:23] 2025-11-28 00:24:21,069 | INFO     | sum of deviations: 2953095362050.8525
[2025-11-28 01:25:23] 2025-11-28 00:24:21,069 | INFO     | mean x: 1764247299.5667634
[2025-11-28 01:25:23] 2025-11-28 00:24:21,069 | INFO     | mean y: 2851610.0667634252
[2025-11-28 01:25:23] 2025-11-28 00:24:21,069 | INFO     | intersect: -6418277050.34407
[2025-11-28 01:25:23] 2025-11-28 00:24:21,071 | INFO     | chi2: 16.809403067028164
[2025-11-28 01:25:23] 2025-11-28 00:24:21,071 | INFO     | current chi2=16.809403067028164 (change=22.552065073196864 %)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,071 | INFO     | left removable region: 10
[2025-11-28 01:25:23] 2025-11-28 00:24:21,073 | INFO     | sum of square deviations: 792106341799.2393
[2025-11-28 01:25:23] 2025-11-28 00:24:21,135 | INFO     | sum of deviations: 3045220021145.125
[2025-11-28 01:25:23] 2025-11-28 00:24:21,135 | INFO     | mean x: 1764247269.0753474
[2025-11-28 01:25:23] 2025-11-28 00:24:21,136 | INFO     | mean y: 2869846.202633504
[2025-11-28 01:25:23] 2025-11-28 00:24:21,136 | INFO     | intersect: -6779705702.726039
[2025-11-28 01:25:23] 2025-11-28 00:24:21,137 | INFO     | chi2: 9.573923818992318
[2025-11-28 01:25:23] 2025-11-28 00:24:21,138 | INFO     | current memory leak: 3.84 B/s (using 1367 data points, chi2=9.57)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,139 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | ..............................
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . Timing measurements:
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . get job = 0 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . initial setup = 6 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . payload setup = 167 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . stage-in = 0 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . payload execution = 84533 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,140 | INFO     | . stage-out = 4 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,141 | INFO     | . log creation = 1 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,141 | INFO     | ..............................
[2025-11-28 01:25:23] 2025-11-28 00:24:21,260 | INFO     | 
[2025-11-28 01:25:23] 2025-11-28 00:24:21,261 | INFO     | job summary report
[2025-11-28 01:25:23] 2025-11-28 00:24:21,261 | INFO     | --------------------------------------------------
[2025-11-28 01:25:23] 2025-11-28 00:24:21,261 | INFO     | PanDA job id: 6895359099
[2025-11-28 01:25:23] 2025-11-28 00:24:21,261 | INFO     | task id: 47556149
[2025-11-28 01:25:23] 2025-11-28 00:24:21,261 | INFO     | errors: (none)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,261 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | pilot state: finished 
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | transexitcode: 0
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | exeerrorcode: 0
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | exeerrordiag: 
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | exitcode: 0
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | exitmsg: OK
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | cpuconsumptiontime: 319181 s
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | nevents: 1000
[2025-11-28 01:25:23] 2025-11-28 00:24:21,262 | INFO     | neventsw: 0
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | pid: 31395
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | pgrp: 31395
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | corecount: 8
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | event service: False
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | sizes: {0: 2283430, 1: 2284115, 2: 2284314, 12: 2284314, 23: 2284342, 34: 2284370, 45: 2284526, 55: 2284554, 66: 2284582, 77: 2284610, 88: 2284666, 97: 2285236, 98
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | --------------------------------------------------
[2025-11-28 01:25:23] 2025-11-28 00:24:21,263 | INFO     | 
[2025-11-28 01:25:23] 2025-11-28 00:24:21,264 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,791 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,792 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,793 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 01:25:23] 2025-11-28 00:24:21,793 | INFO     | job 6895359099 has completed (purged errors)
[2025-11-28 01:25:23] 2025-11-28 00:24:21,793 | INFO     | overall cleanup function is called
[2025-11-28 01:25:23] 2025-11-28 00:24:22,816 | INFO     | --- collectZombieJob: --- 10, [31395]
[2025-11-28 01:25:23] 2025-11-28 00:24:22,817 | INFO     | zombie collector waiting for pid 31395
[2025-11-28 01:25:23] 2025-11-28 00:24:22,817 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 01:25:23] 2025-11-28 00:24:22,817 | INFO     | collected zombie processes
[2025-11-28 01:25:23] 2025-11-28 00:24:22,817 | INFO     | will attempt to kill all subprocesses of pid=31395
[2025-11-28 01:25:23] 2025-11-28 00:24:22,945 | INFO     | process IDs to be killed: [31395] (in reverse order)
[2025-11-28 01:25:23] 2025-11-28 00:24:23,836 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 01:25:23] 2025-11-28 00:24:23,836 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 01:25:23] 2025-11-28 00:24:23,840 | INFO     | did not find any defunct processes belonging to 31395
[2025-11-28 01:25:23] 2025-11-28 00:24:23,844 | INFO     | did not find any defunct processes belonging to 31395
[2025-11-28 01:25:23] 2025-11-28 00:24:23,902 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 01:25:23] 2025-11-28 00:24:23,903 | INFO     | ready for new job
[2025-11-28 01:25:23] 2025-11-28 00:24:23,903 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 01:25:23] 2025-11-28 00:24:23,910 | INFO     | ***************************************
[2025-11-28 01:25:23] 2025-11-28 00:24:23,911 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 01:25:23] 2025-11-28 00:24:23,911 | INFO     | ***************************************
[2025-11-28 01:25:23] 2025-11-28 00:24:23,911 | INFO     | 
[2025-11-28 01:25:23] 2025-11-28 00:24:23,912 | INFO     | pilot is running in a VM
[2025-11-28 01:25:23] 2025-11-28 00:24:23,912 | INFO     | architecture information:
[2025-11-28 01:25:23] 2025-11-28 00:24:23,929 | INFO     | executing command: cat /etc/os-release
[2025-11-28 01:25:23] 2025-11-28 00:24:24,187 | INFO     | cat /etc/os-release:
[2025-11-28 01:25:23] NAME="CentOS Linux"
[2025-11-28 01:25:23] VERSION="7 (Core)"
[2025-11-28 01:25:23] ID="centos"
[2025-11-28 01:25:23] ID_LIKE="rhel fedora"
[2025-11-28 01:25:23] VERSION_ID="7"
[2025-11-28 01:25:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 01:25:23] ANSI_COLOR="0;31"
[2025-11-28 01:25:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 01:25:23] HOME_URL="https://www.centos.org/"
[2025-11-28 01:25:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 01:25:23] 
[2025-11-28 01:25:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 01:25:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 01:25:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 01:25:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 01:25:23] 
[2025-11-28 01:25:23] 2025-11-28 00:24:24,187 | INFO     | ***************************************
[2025-11-28 01:25:23] 2025-11-28 00:24:24,690 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-28 01:25:23] 2025-11-28 00:24:24,927 | INFO     | sufficient remaining disk space (494739128320 B)
[2025-11-28 01:25:23] 2025-11-28 00:24:24,928 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 01:25:23] 2025-11-28 00:24:24,928 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 01:25:23] 2025-11-28 00:24:24,928 | INFO     | update_server=False
[2025-11-28 01:25:23] 2025-11-28 00:24:24,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 01:25:23] 2025-11-28 00:24:24,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:25:23] 2025-11-28 00:24:24,929 | INFO     | aborting loop
[2025-11-28 01:25:23] 2025-11-28 00:24:25,080 | INFO     | all data control threads have been joined
[2025-11-28 01:25:23] 2025-11-28 00:24:25,263 | INFO     | all payload control threads have been joined
[2025-11-28 01:25:23] 2025-11-28 00:24:25,934 | INFO     | [job] retrieve thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:25,935 | INFO     | [job] job monitor thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,027 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,086 | INFO     | [data] control thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,095 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 01:25:23] 2025-11-28 00:24:26,134 | INFO     | all job control threads have been joined
[2025-11-28 01:25:23] 2025-11-28 00:24:26,269 | INFO     | [payload] control thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,275 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 01:25:23] 2025-11-28 00:24:26,350 | INFO     | [job] validate thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,469 | INFO     | [data] copytool_in thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,639 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:26,947 | INFO     | [payload] failed_post thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:27,097 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:27,140 | INFO     | [job] control thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:27,243 | INFO     | [payload] validate_post thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:27,281 | INFO     | [job] queue monitor thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:27,476 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 01:25:23] 2025-11-28 00:24:28,102 | INFO     | [data] copytool_out thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:31,485 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:35,351 | INFO     | job.realtimelogging is not enabled
[2025-11-28 01:25:23] 2025-11-28 00:24:36,357 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 01:25:23] 2025-11-28 00:24:53,372 | INFO     | PID=24790 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-28 01:25:23] 2025-11-28 00:24:53,372 | INFO     | .. there are 9 such processes running
[2025-11-28 01:25:23] 2025-11-28 00:24:53,373 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 01:25:23] 2025-11-28 00:24:53,373 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 01:25:23] 2025-11-28 00:24:53,373 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 01:25:23] 2025-11-28 00:25:12,737 | INFO     | [monitor] cgroup control has ended
[2025-11-28 01:25:23] 2025-11-28 00:25:12,798 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912168109888)>', '<ExcThread(monitor, started 139911445346048)>']
[2025-11-28 01:25:23] 2025-11-28 00:25:13,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 01:25:23] 2025-11-28 00:25:13,494 | INFO     | [monitor] control thread has ended
[2025-11-28 01:25:23] 2025-11-28 00:25:17,823 | INFO     | all workflow threads have been joined
[2025-11-28 01:25:23] 2025-11-28 00:25:17,823 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 01:25:23] 2025-11-28 00:25:17,824 | INFO     | traces error code: 0
[2025-11-28 01:25:23] 2025-11-28 00:25:17,824 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 01:25:23] 2025-11-28 00:25:18,172 [wrapper] ==== pilot stdout END ====
[2025-11-28 01:25:23] 2025-11-28 00:25:18,246 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 01:25:23] 2025-11-28 00:25:18,322 [wrapper] pilotpid: 24790
[2025-11-28 01:25:23] 2025-11-28 00:25:18,410 [wrapper] Pilot exit status: 0
[2025-11-28 01:25:23] 2025-11-28 00:25:18,827 [wrapper] pandaids: 6895359099
[2025-11-28 01:25:23] 2025-11-28 00:25:19,725 [wrapper] cleanup supervisor_pilot  4696 24791
[2025-11-28 01:25:23] 2025-11-28 00:25:19,837 [wrapper] Test setup, not cleaning
[2025-11-28 01:25:23] 2025-11-28 00:25:19,926 [wrapper] apfmon messages muted
[2025-11-28 01:25:23] 2025-11-28 00:25:19,999 [wrapper] ==== wrapper stdout END ====
[2025-11-28 01:25:23] 2025-11-28 00:25:20,123 [wrapper] ==== wrapper stderr END ====
[2025-11-28 01:25:23]  *** Error codes and diagnostics ***
[2025-11-28 01:25:23]     "exeErrorCode": 0,
[2025-11-28 01:25:23]     "exeErrorDiag": "",
[2025-11-28 01:25:23]     "pilotErrorCode": 0,
[2025-11-28 01:25:23]     "pilotErrorDiag": "",
[2025-11-28 01:25:23]  *** Listing of results directory ***
[2025-11-28 01:25:23] total 1329372
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc    576529 Nov 23 14:09 pilot3.tar.gz
[2025-11-28 01:25:23] -rwx------. 1 boinc boinc     36292 Nov 23 14:18 runpilot2-wrapper.sh
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc      5112 Nov 23 14:18 queuedata.json
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc       100 Nov 27 01:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 01:25:23] -rwxr-xr-x. 1 boinc boinc      7986 Nov 27 01:43 run_atlas
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc       105 Nov 27 01:43 job.xml
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc      6392 Nov 27 01:43 init_data.xml
[2025-11-28 01:25:23] -rw-r--r--. 2 boinc boinc 410087965 Nov 27 01:43 EVNT.47483658._001164.pool.root.1
[2025-11-28 01:25:23] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:43 start_atlas.sh
[2025-11-28 01:25:23] drwxrwx--x. 2 boinc boinc        68 Nov 27 01:43 shared
[2025-11-28 01:25:23] -rw-r--r--. 2 boinc boinc    590090 Nov 27 01:43 input.tar.gz
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc         0 Nov 27 01:43 boinc_lockfile
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc      2782 Nov 27 01:43 pandaJob.out
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc    991546 Nov 27 01:47 agis_schedconf.cvmfs.json
[2025-11-28 01:25:23] drwx------. 5 boinc boinc      4096 Nov 27 01:47 pilot3
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc       533 Nov 28 00:59 boinc_task_state.xml
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc 919607467 Nov 28 01:21 HITS.47556149._001501.pool.root.1
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc      1029 Nov 28 01:22 memory_monitor_summary.json
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc   1516240 Nov 28 01:22 agis_ddmendpoints.agis.ALL.json
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc   2474034 Nov 28 01:22 log.47556149._001501.job.log.tgz.1
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc      7944 Nov 28 01:24 heartbeat.json
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc        95 Nov 28 01:24 pilot_heartbeat.json
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc      8192 Nov 28 01:25 boinc_mmap_file
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc        29 Nov 28 01:25 wrapper_checkpoint.txt
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc      4956 Nov 28 01:25 pilotlog.txt
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc  11363341 Nov 28 01:25 log.47556149._001501.job.log.1
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc       353 Nov 28 01:25 output.list
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc       620 Nov 28 01:25 runtime_log
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc  13854720 Nov 28 01:25 result.tar.gz
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc      8817 Nov 28 01:25 runtime_log.err
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc       662 Nov 28 01:25 kuPKDmk9Oh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdvKKDmkYOcen.diag
[2025-11-28 01:25:23] -rw-r--r--. 1 boinc boinc     21413 Nov 28 01:25 stderr.txt
[2025-11-28 01:25:23] HITS file was successfully produced:
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc 919607467 Nov 28 01:21 shared/HITS.pool.root.1
[2025-11-28 01:25:23]  *** Contents of shared directory: ***
[2025-11-28 01:25:23] total 1312664
[2025-11-28 01:25:23] -rw-r--r--. 2 boinc boinc 410087965 Nov 27 01:43 ATLAS.root_0
[2025-11-28 01:25:23] -rw-r--r--. 2 boinc boinc     15847 Nov 27 01:43 start_atlas.sh
[2025-11-28 01:25:23] -rw-r--r--. 2 boinc boinc    590090 Nov 27 01:43 input.tar.gz
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc 919607467 Nov 28 01:21 HITS.pool.root.1
[2025-11-28 01:25:23] -rw-------. 1 boinc boinc  13854720 Nov 28 01:25 result.tar.gz
01:25:25 (20999): run_atlas exited; CPU time 319763.302813
01:25:25 (20999): called boinc_finish(0)

</stderr_txt>
]]>

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