Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:48:43 (363540): wrapper (7.7.26015): starting
09:48:43 (363540): wrapper: running run_atlas (--nthreads 9)
[2025-11-24 09:48:43] Arguments: --nthreads 9
[2025-11-24 09:48:43] Threads: 9
[2025-11-24 09:48:43] Checking for CVMFS
[2025-11-24 09:48:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 09:48:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 09:48:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 09:48:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 09:48:43] 2.13.3.0 3025293 6213 94380 153248 0 81 14299781 37030913 1932 16776704 0 6856035 99.917 678146 16530 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 09:48:43] CVMFS is ok
[2025-11-24 09:48:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:48:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:48:43] Further information can be found at the LHC@home message board.
[2025-11-24 09:48:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:48:43] Checking for apptainer binary...
[2025-11-24 09:48:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 09:48:43] Running /usr/bin/apptainer --version
[2025-11-24 09:48:43] apptainer version 1.4.4-1.el9
[2025-11-24 09:48:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:48:44] c-205-37.aglt2.org
[2025-11-24 09:48:44] apptainer works
[2025-11-24 09:48:44] Set ATHENA_PROC_NUMBER=9
[2025-11-24 09:48:44] Set ATHENA_CORE_NUMBER=9
[2025-11-24 09:48:44] Starting ATLAS job with PandaID=6894053067
[2025-11-24 09:48:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 12:32:16]  *** The last 200 lines of the pilot log: ***
[2025-11-24 12:32:16] 2025-11-24 17:31:21,442 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 12:32:16] 2025-11-24 17:31:21,442 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-24 12:32:16] 2025-11-24 17:31:21,442 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-24 12:32:16] 2025-11-24 17:31:21,446 | INFO     | fitting pss+swap vs Time
[2025-11-24 12:32:16] 2025-11-24 17:31:21,446 | INFO     | sum of square deviations: 1270051720.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,447 | INFO     | sum of deviations: 3057114155.499998
[2025-11-24 12:32:16] 2025-11-24 17:31:21,447 | INFO     | mean x: 1764000607.5
[2025-11-24 12:32:16] 2025-11-24 17:31:21,447 | INFO     | mean y: 2669442.61875
[2025-11-24 12:32:16] 2025-11-24 17:31:21,447 | INFO     | intersect: -4243418447.013686
[2025-11-24 12:32:16] 2025-11-24 17:31:21,448 | INFO     | chi2: 2.126568134895302
[2025-11-24 12:32:16] 2025-11-24 17:31:21,448 | INFO     | sum of square deviations: 1154663510.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,449 | INFO     | sum of deviations: 13545817380.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,449 | INFO     | mean x: 1764000455.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,449 | INFO     | mean y: 2682947.1806451613
[2025-11-24 12:32:16] 2025-11-24 17:31:21,450 | INFO     | intersect: -20691508749.98913
[2025-11-24 12:32:16] 2025-11-24 17:31:21,450 | INFO     | chi2: 1.448057268197343
[2025-11-24 12:32:16] 2025-11-24 17:31:21,450 | INFO     | current chi2=1.448057268197343 (change=31.90637796006307 %)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,450 | INFO     | sum of square deviations: 1046484737.5
[2025-11-24 12:32:16] 2025-11-24 17:31:21,451 | INFO     | sum of deviations: 13159540797.000002
[2025-11-24 12:32:16] 2025-11-24 17:31:21,451 | INFO     | mean x: 1764000302.5
[2025-11-24 12:32:16] 2025-11-24 17:31:21,452 | INFO     | mean y: 2682402.466666667
[2025-11-24 12:32:16] 2025-11-24 17:31:21,452 | INFO     | intersect: -22179613349.045998
[2025-11-24 12:32:16] 2025-11-24 17:31:21,452 | INFO     | chi2: 1.4496312279864563
[2025-11-24 12:32:16] 2025-11-24 17:31:21,452 | INFO     | current chi2=1.4496312279864563 (change=-0.10869458160813865 %)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,452 | INFO     | right removable region: 149
[2025-11-24 12:32:16] 2025-11-24 17:31:21,453 | INFO     | sum of square deviations: 1154663510.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,454 | INFO     | sum of deviations: -20122836587.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,454 | INFO     | mean x: 1764000760.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,454 | INFO     | mean y: 2699595.5741935484
[2025-11-24 12:32:16] 2025-11-24 17:31:21,454 | INFO     | intersect: 30744728529.028408
[2025-11-24 12:32:16] 2025-11-24 17:31:21,454 | INFO     | chi2: 0.8337914053691801
[2025-11-24 12:32:16] 2025-11-24 17:31:21,455 | INFO     | current chi2=0.8337914053691801 (change=60.79169100263836 %)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,455 | INFO     | sum of square deviations: 1046484737.5
[2025-11-24 12:32:16] 2025-11-24 17:31:21,456 | INFO     | sum of deviations: -15078006718.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,456 | INFO     | mean x: 1764000912.5
[2025-11-24 12:32:16] 2025-11-24 17:31:21,456 | INFO     | mean y: 2692405.986666667
[2025-11-24 12:32:16] 2025-11-24 17:31:21,456 | INFO     | intersect: 25418846752.177628
[2025-11-24 12:32:16] 2025-11-24 17:31:21,457 | INFO     | chi2: 0.800657407822342
[2025-11-24 12:32:16] 2025-11-24 17:31:21,457 | INFO     | current chi2=0.800657407822342 (change=3.973895309243116 %)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,457 | INFO     | left removable region: 20
[2025-11-24 12:32:16] 2025-11-24 17:31:21,457 | INFO     | sum of square deviations: 665612480.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,458 | INFO     | sum of deviations: 3167789353.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,458 | INFO     | mean x: 1764000882.0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,458 | INFO     | mean y: 2694534.519379845
[2025-11-24 12:32:16] 2025-11-24 17:31:21,458 | INFO     | intersect: -8392555525.518872
[2025-11-24 12:32:16] 2025-11-24 17:31:21,459 | INFO     | chi2: 0.0018341221940620998
[2025-11-24 12:32:16] 2025-11-24 17:31:21,459 | INFO     | current memory leak: 4.76 B/s (using 129 data points, chi2=0.00)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,459 | INFO     | could have reported an average CPU frequency of 2631 MHz (9 samples)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | ..............................
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . Timing measurements:
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . get job = 0 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . initial setup = 2 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . payload setup = 5 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . stage-in = 0 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . payload execution = 9718 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,460 | INFO     | . stage-out = 1 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,461 | INFO     | . log creation = 0 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,461 | INFO     | ..............................
[2025-11-24 12:32:16] 2025-11-24 17:31:21,589 | INFO     | 
[2025-11-24 12:32:16] 2025-11-24 17:31:21,589 | INFO     | job summary report
[2025-11-24 12:32:16] 2025-11-24 17:31:21,589 | INFO     | --------------------------------------------------
[2025-11-24 12:32:16] 2025-11-24 17:31:21,589 | INFO     | PanDA job id: 6894053067
[2025-11-24 12:32:16] 2025-11-24 17:31:21,589 | INFO     | task id: 47523618
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | errors: (none)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | pilot state: finished 
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | transexitcode: 0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | exeerrorcode: 0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | exeerrordiag: 
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | exitcode: 0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | exitmsg: OK
[2025-11-24 12:32:16] 2025-11-24 17:31:21,590 | INFO     | cpuconsumptiontime: 83104 s
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | nevents: 400
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | neventsw: 0
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | pid: 373690
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | pgrp: 373690
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | corecount: 9
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | event service: False
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | sizes: {0: 2283938, 4: 2284200, 11: 2284228, 9727: 2312855, 9728: 2321909, 9732: 2322111}
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | --------------------------------------------------
[2025-11-24 12:32:16] 2025-11-24 17:31:21,591 | INFO     | 
[2025-11-24 12:32:16] 2025-11-24 17:31:21,592 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-24 12:32:16] 2025-11-24 17:31:21,609 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,610 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,612 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,612 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,612 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 12:32:16] 2025-11-24 17:31:21,612 | INFO     | job 6894053067 has completed (purged errors)
[2025-11-24 12:32:16] 2025-11-24 17:31:21,612 | INFO     | overall cleanup function is called
[2025-11-24 12:32:16] 2025-11-24 17:31:22,524 | WARNING  | process 373690 can no longer be monitored (due to stat problems) - aborting
[2025-11-24 12:32:16] 2025-11-24 17:31:22,620 | INFO     | --- collectZombieJob: --- 10, [373690]
[2025-11-24 12:32:16] 2025-11-24 17:31:22,620 | INFO     | zombie collector waiting for pid 373690
[2025-11-24 12:32:16] 2025-11-24 17:31:22,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 12:32:16] 2025-11-24 17:31:22,621 | INFO     | collected zombie processes
[2025-11-24 12:32:16] 2025-11-24 17:31:22,621 | INFO     | will attempt to kill all subprocesses of pid=373690
[2025-11-24 12:32:16] 2025-11-24 17:31:22,758 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 12:32:16] 2025-11-24 17:31:23,018 | INFO     | process IDs to be killed: [373690] (in reverse order)
[2025-11-24 12:32:16] 2025-11-24 17:31:23,075 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 12:32:16] 2025-11-24 17:31:23,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 12:32:16] 2025-11-24 17:31:23,092 | INFO     | did not find any defunct processes belonging to 373690
[2025-11-24 12:32:16] 2025-11-24 17:31:23,099 | INFO     | number of running child processes to parent process 373690: 1
[2025-11-24 12:32:16] 2025-11-24 17:31:23,100 | INFO     | maximum number of monitored processes: 6
[2025-11-24 12:32:16] 2025-11-24 17:31:23,100 | INFO     | aborting job monitoring since job object (job id=6894053067) has expired
[2025-11-24 12:32:16] 2025-11-24 17:31:23,103 | INFO     | did not find any defunct processes belonging to 373690
[2025-11-24 12:32:16] 2025-11-24 17:31:23,105 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 12:32:16] 2025-11-24 17:31:23,105 | INFO     | ready for new job
[2025-11-24 12:32:16] 2025-11-24 17:31:23,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 12:32:16] 2025-11-24 17:31:23,107 | INFO     | ***************************************
[2025-11-24 12:32:16] 2025-11-24 17:31:23,107 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 12:32:16] 2025-11-24 17:31:23,107 | INFO     | ***************************************
[2025-11-24 12:32:16] 2025-11-24 17:31:23,107 | INFO     | 
[2025-11-24 12:32:16] 2025-11-24 17:31:23,109 | INFO     | architecture information:
[2025-11-24 12:32:16] 2025-11-24 17:31:23,109 | INFO     | executing command: cat /etc/os-release
[2025-11-24 12:32:16] 2025-11-24 17:31:23,122 | INFO     | cat /etc/os-release:
[2025-11-24 12:32:16] NAME="CentOS Linux"
[2025-11-24 12:32:16] VERSION="7 (Core)"
[2025-11-24 12:32:16] ID="centos"
[2025-11-24 12:32:16] ID_LIKE="rhel fedora"
[2025-11-24 12:32:16] VERSION_ID="7"
[2025-11-24 12:32:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 12:32:16] ANSI_COLOR="0;31"
[2025-11-24 12:32:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 12:32:16] HOME_URL="https://www.centos.org/"
[2025-11-24 12:32:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 12:32:16] 
[2025-11-24 12:32:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 12:32:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 12:32:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 12:32:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 12:32:16] 
[2025-11-24 12:32:16] 2025-11-24 17:31:23,122 | INFO     | ***************************************
[2025-11-24 12:32:16] 2025-11-24 17:31:23,625 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-24 12:32:16] 2025-11-24 17:31:23,639 | INFO     | sufficient remaining disk space (38912655360 B)
[2025-11-24 12:32:16] 2025-11-24 17:31:23,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 12:32:16] 2025-11-24 17:31:23,640 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 12:32:16] 2025-11-24 17:31:23,640 | INFO     | update_server=False
[2025-11-24 12:32:16] 2025-11-24 17:31:23,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 12:32:16] 2025-11-24 17:31:23,640 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 12:32:16] 2025-11-24 17:31:23,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:32:16] 2025-11-24 17:31:23,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 12:32:16] 2025-11-24 17:31:23,641 | INFO     | will abort loop
[2025-11-24 12:32:16] 2025-11-24 17:31:24,128 | INFO     | all data control threads have been joined
[2025-11-24 12:32:16] 2025-11-24 17:31:24,429 | INFO     | all job control threads have been joined
[2025-11-24 12:32:16] 2025-11-24 17:31:24,645 | INFO     | [job] retrieve thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:24,646 | INFO     | [job] job monitor thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:24,705 | INFO     | all payload control threads have been joined
[2025-11-24 12:32:16] 2025-11-24 17:31:24,723 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,060 | INFO     | [payload] validate_post thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,133 | INFO     | [data] control thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,292 | INFO     | [payload] failed_post thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,434 | INFO     | [job] control thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,464 | INFO     | [data] copytool_in thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,516 | INFO     | [job] validate thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,646 | INFO     | [data] copytool_out thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,711 | INFO     | [payload] control thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,855 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:25,924 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:26,570 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 12:32:16] 2025-11-24 17:31:27,575 | INFO     | [job] queue monitor thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:27,647 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:34,519 | INFO     | job.realtimelogging is not enabled
[2025-11-24 12:32:16] 2025-11-24 17:31:35,524 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 12:32:16] 2025-11-24 17:31:52,948 | INFO     | PID=367243 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 12:32:16] 2025-11-24 17:31:52,948 | INFO     | .. there are 3 such processes running
[2025-11-24 12:32:16] 2025-11-24 17:31:52,949 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 12:32:16] 2025-11-24 17:31:52,949 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 12:32:16] 2025-11-24 17:31:52,949 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 12:32:16] 2025-11-24 17:32:09,912 | INFO     | [monitor] cgroup control has ended
[2025-11-24 12:32:16] 2025-11-24 17:32:11,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140499935737664)>', '<ExcThread(monitor, started 140499293816576)>']
[2025-11-24 12:32:16] 2025-11-24 17:32:11,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 12:32:16] 2025-11-24 17:32:11,035 | INFO     | [monitor] control thread has ended
[2025-11-24 12:32:16] 2025-11-24 17:32:16,052 | INFO     | all workflow threads have been joined
[2025-11-24 12:32:16] 2025-11-24 17:32:16,052 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 12:32:16] 2025-11-24 17:32:16,053 | INFO     | traces error code: 0
[2025-11-24 12:32:16] 2025-11-24 17:32:16,053 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 12:32:16] 2025-11-24 17:32:16,155 [wrapper] ==== pilot stdout END ====
[2025-11-24 12:32:16] 2025-11-24 17:32:16,157 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 12:32:16] 2025-11-24 17:32:16,160 [wrapper] pilotpid: 367243
[2025-11-24 12:32:16] 2025-11-24 17:32:16,162 [wrapper] Pilot exit status: 0
[2025-11-24 12:32:16] 2025-11-24 17:32:16,171 [wrapper] pandaids: 6894053067
[2025-11-24 12:32:16] 2025-11-24 17:32:16,208 [wrapper] cleanup supervisor_pilot  494762 367244
[2025-11-24 12:32:16] 2025-11-24 17:32:16,211 [wrapper] Test setup, not cleaning
[2025-11-24 12:32:16] 2025-11-24 17:32:16,213 [wrapper] apfmon messages muted
[2025-11-24 12:32:16] 2025-11-24 17:32:16,216 [wrapper] ==== wrapper stdout END ====
[2025-11-24 12:32:16] 2025-11-24 17:32:16,218 [wrapper] ==== wrapper stderr END ====
[2025-11-24 12:32:16]  *** Error codes and diagnostics ***
[2025-11-24 12:32:16]     "exeErrorCode": 0,
[2025-11-24 12:32:16]     "exeErrorDiag": "",
[2025-11-24 12:32:16]     "pilotErrorCode": 0,
[2025-11-24 12:32:16]     "pilotErrorDiag": "",
[2025-11-24 12:32:16]  *** Listing of results directory ***
[2025-11-24 12:32:16] total 606944
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas    576529 Nov 23 08:59 pilot3.tar.gz
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas      5112 Nov 23 09:03 queuedata.json
[2025-11-24 12:32:16] -rwx------. 1 boincer umatlas     36292 Nov 23 09:06 runpilot2-wrapper.sh
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas       100 Nov 24 09:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 12:32:16] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 24 09:48 run_atlas
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas       105 Nov 24 09:48 job.xml
[2025-11-24 12:32:16] -rw-r--r--. 2 boincer umatlas 309903429 Nov 24 09:48 EVNT.47523616._000001.pool.root.1
[2025-11-24 12:32:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 09:48 start_atlas.sh
[2025-11-24 12:32:16] drwxrwx--x. 2 boincer umatlas      4096 Nov 24 09:48 shared
[2025-11-24 12:32:16] -rw-r--r--. 2 boincer umatlas    589947 Nov 24 09:48 input.tar.gz
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas         0 Nov 24 09:48 boinc_lockfile
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas      2609 Nov 24 09:48 pandaJob.out
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas    988283 Nov 24 09:48 agis_schedconf.cvmfs.json
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas   1516227 Nov 24 09:48 agis_ddmendpoints.agis.ALL.json
[2025-11-24 12:32:16] drwx------. 5 boincer umatlas      4096 Nov 24 09:48 pilot3
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas      6529 Nov 24 12:30 init_data.xml
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas       529 Nov 24 12:30 boinc_task_state.xml
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas 304054094 Nov 24 12:30 HITS.47523618._000013.pool.root.1
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas        95 Nov 24 12:31 pilot_heartbeat.json
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas      1033 Nov 24 12:31 memory_monitor_summary.json
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas    418104 Nov 24 12:31 log.47523618._000013.job.log.tgz.1
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas      7795 Nov 24 12:31 heartbeat.json
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas      8192 Nov 24 12:32 boinc_mmap_file
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas        27 Nov 24 12:32 wrapper_checkpoint.txt
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas      4896 Nov 24 12:32 pilotlog.txt
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas   1404338 Nov 24 12:32 log.47523618._000013.job.log.1
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas       357 Nov 24 12:32 output.list
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas       620 Nov 24 12:32 runtime_log
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas   1843200 Nov 24 12:32 result.tar.gz
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas      8817 Nov 24 12:32 runtime_log.err
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas       653 Nov 24 12:32 qrINDmCuPh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPZIKDmxgAg7m.diag
[2025-11-24 12:32:16] -rw-r--r--. 1 boincer umatlas     21144 Nov 24 12:32 stderr.txt
[2025-11-24 12:32:16] HITS file was successfully produced:
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas 304054094 Nov 24 12:30 shared/HITS.pool.root.1
[2025-11-24 12:32:16]  *** Contents of shared directory: ***
[2025-11-24 12:32:16] total 601972
[2025-11-24 12:32:16] -rw-r--r--. 2 boincer umatlas 309903429 Nov 24 09:48 ATLAS.root_0
[2025-11-24 12:32:16] -rw-r--r--. 2 boincer umatlas     15847 Nov 24 09:48 start_atlas.sh
[2025-11-24 12:32:16] -rw-r--r--. 2 boincer umatlas    589947 Nov 24 09:48 input.tar.gz
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas 304054094 Nov 24 12:30 HITS.pool.root.1
[2025-11-24 12:32:16] -rw-------. 1 boincer umatlas   1843200 Nov 24 12:32 result.tar.gz
12:32:17 (363540): run_atlas exited; CPU time 83330.359450
12:32:17 (363540): called boinc_finish(0)

</stderr_txt>
]]>

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