Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:44:07 (20379): wrapper (7.7.26015): starting
04:44:07 (20379): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 04:44:07] Arguments: --nthreads 8
[2025-11-24 04:44:07] Threads: 8
[2025-11-24 04:44:07] Checking for CVMFS
[2025-11-24 04:44:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 04:44:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 04:44:07] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 04:44:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 04:44:08] 2.11.2.0 2795 44373 84076 153240 1 82 14433056 20275201 1 130560 0 6143153 99.608 2944003 28435 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-24 04:44:08] CVMFS is ok
[2025-11-24 04:44:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 04:44:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 04:44:08] Further information can be found at the LHC@home message board.
[2025-11-24 04:44:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 04:44:08] Checking for apptainer binary...
[2025-11-24 04:44:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 04:44:08] Running /usr/bin/apptainer --version
[2025-11-24 04:44:08] apptainer version 1.3.2-1.el7
[2025-11-24 04:44:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 04:44:09] c-204-18.aglt2.org
[2025-11-24 04:44:09] apptainer works
[2025-11-24 04:44:09] Set ATHENA_PROC_NUMBER=8
[2025-11-24 04:44:09] Set ATHENA_CORE_NUMBER=8
[2025-11-24 04:44:09] Starting ATLAS job with PandaID=6895360357
[2025-11-24 04:44:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 17:19:52]  *** The last 200 lines of the pilot log: ***
[2025-11-24 17:19:52] 2025-11-24 22:19:18,415 | INFO     | monitor loop #3325: job 0:6895360357 is in state 'finished'
[2025-11-24 17:19:52] 2025-11-24 22:19:18,415 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,069 | INFO     | time since job start (45292s) is within the limit (172800.0s)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,300 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-24 17:19:52] 2025-11-24 22:19:19,306 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1645.875
[2025-11-24 17:19:52] 2025-11-24 22:19:19,309 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6895360357/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,310 | INFO     | extracted standard info from prmon json
[2025-11-24 17:19:52] 2025-11-24 22:19:19,310 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 17:19:52] 2025-11-24 22:19:19,310 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 17:19:52] 2025-11-24 22:19:19,323 | INFO     | fitting pss+swap vs Time
[2025-11-24 17:19:52] 2025-11-24 22:19:19,324 | INFO     | sum of square deviations: 126675454813.26831
[2025-11-24 17:19:52] 2025-11-24 22:19:19,335 | INFO     | sum of deviations: 791328578210.1384
[2025-11-24 17:19:52] 2025-11-24 22:19:19,335 | INFO     | mean x: 1764000099.1630728
[2025-11-24 17:19:52] 2025-11-24 22:19:19,335 | INFO     | mean y: 3095747.114555256
[2025-11-24 17:19:52] 2025-11-24 22:19:19,336 | INFO     | intersect: -11016432009.789516
[2025-11-24 17:19:52] 2025-11-24 22:19:19,336 | INFO     | chi2: 5.6382059009829995
[2025-11-24 17:19:52] 2025-11-24 22:19:19,337 | INFO     | sum of square deviations: 124132012993.55486
[2025-11-24 17:19:52] 2025-11-24 22:19:19,349 | INFO     | sum of deviations: 1035809278481.5592
[2025-11-24 17:19:52] 2025-11-24 22:19:19,349 | INFO     | mean x: 1763999946.6675713
[2025-11-24 17:19:52] 2025-11-24 22:19:19,349 | INFO     | mean y: 3110399.659430122
[2025-11-24 17:19:52] 2025-11-24 22:19:19,349 | INFO     | intersect: -14716440729.29967
[2025-11-24 17:19:52] 2025-11-24 22:19:19,350 | INFO     | chi2: 2.9560805586353194
[2025-11-24 17:19:52] 2025-11-24 22:19:19,350 | INFO     | current chi2=2.9560805586353194 (change=47.57054618881623 %)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,351 | INFO     | sum of square deviations: 121622850886.3116
[2025-11-24 17:19:52] 2025-11-24 22:19:19,362 | INFO     | sum of deviations: 1133112327483.3447
[2025-11-24 17:19:52] 2025-11-24 22:19:19,362 | INFO     | mean x: 1763999794.172131
[2025-11-24 17:19:52] 2025-11-24 22:19:19,363 | INFO     | mean y: 3116303.1639344264
[2025-11-24 17:19:52] 2025-11-24 22:19:19,363 | INFO     | intersect: -16431376868.87111
[2025-11-24 17:19:52] 2025-11-24 22:19:19,364 | INFO     | chi2: 2.3702773065578167
[2025-11-24 17:19:52] 2025-11-24 22:19:19,364 | INFO     | current chi2=2.3702773065578167 (change=19.816890658349987 %)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,364 | INFO     | right removable region: 731
[2025-11-24 17:19:52] 2025-11-24 22:19:19,365 | INFO     | sum of square deviations: 124131712873.5549
[2025-11-24 17:19:52] 2025-11-24 22:19:19,376 | INFO     | sum of deviations: 573626258648.6221
[2025-11-24 17:19:52] 2025-11-24 22:19:19,376 | INFO     | mean x: 1764000251.6675713
[2025-11-24 17:19:52] 2025-11-24 22:19:19,377 | INFO     | mean y: 3108778.067842605
[2025-11-24 17:19:52] 2025-11-24 22:19:19,377 | INFO     | intersect: -8148529841.871539
[2025-11-24 17:19:52] 2025-11-24 22:19:19,377 | INFO     | chi2: 3.418445383230719
[2025-11-24 17:19:52] 2025-11-24 22:19:19,378 | INFO     | current chi2=3.418445383230719 (change=39.36997968387912 %)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,378 | INFO     | sum of square deviations: 121622340194.99443
[2025-11-24 17:19:52] 2025-11-24 22:19:19,390 | INFO     | sum of deviations: 530613670402.9281
[2025-11-24 17:19:52] 2025-11-24 22:19:19,390 | INFO     | mean x: 1764000404.169399
[2025-11-24 17:19:52] 2025-11-24 22:19:19,390 | INFO     | mean y: 3111390.7021857924
[2025-11-24 17:19:52] 2025-11-24 22:19:19,390 | INFO     | intersect: -7692865578.232147
[2025-11-24 17:19:52] 2025-11-24 22:19:19,391 | INFO     | chi2: 3.380835058792797
[2025-11-24 17:19:52] 2025-11-24 22:19:19,391 | INFO     | current chi2=3.380835058792797 (change=1.1002172105021861 %)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,391 | INFO     | left removable region: 20
[2025-11-24 17:19:52] 2025-11-24 22:19:19,392 | INFO     | sum of square deviations: 111452608250.52574
[2025-11-24 17:19:52] 2025-11-24 22:19:19,403 | INFO     | sum of deviations: 824191913269.2771
[2025-11-24 17:19:52] 2025-11-24 22:19:19,403 | INFO     | mean x: 1764000373.6807313
[2025-11-24 17:19:52] 2025-11-24 22:19:19,403 | INFO     | mean y: 3135702.005625879
[2025-11-24 17:19:52] 2025-11-24 22:19:19,403 | INFO     | intersect: -13041645087.005505
[2025-11-24 17:19:52] 2025-11-24 22:19:19,404 | INFO     | chi2: 0.08180569732058979
[2025-11-24 17:19:52] 2025-11-24 22:19:19,404 | INFO     | current memory leak: 7.39 B/s (using 711 data points, chi2=0.08)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,405 | INFO     | could have reported an average CPU frequency of 2181 MHz (28 samples)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,405 | INFO     | ..............................
[2025-11-24 17:19:52] 2025-11-24 22:19:19,405 | INFO     | . Timing measurements:
[2025-11-24 17:19:52] 2025-11-24 22:19:19,405 | INFO     | . get job = 0 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | . initial setup = 2 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | . payload setup = 8 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | . stage-in = 0 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | . payload execution = 45248 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | . stage-out = 3 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | . log creation = 0 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,406 | INFO     | ..............................
[2025-11-24 17:19:52] 2025-11-24 22:19:19,502 | INFO     | 
[2025-11-24 17:19:52] 2025-11-24 22:19:19,503 | INFO     | job summary report
[2025-11-24 17:19:52] 2025-11-24 22:19:19,503 | INFO     | --------------------------------------------------
[2025-11-24 17:19:52] 2025-11-24 22:19:19,503 | INFO     | PanDA job id: 6895360357
[2025-11-24 17:19:52] 2025-11-24 22:19:19,503 | INFO     | task id: 47556137
[2025-11-24 17:19:52] 2025-11-24 22:19:19,504 | INFO     | errors: (none)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,504 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 17:19:52] 2025-11-24 22:19:19,504 | INFO     | pilot state: finished 
[2025-11-24 17:19:52] 2025-11-24 22:19:19,504 | INFO     | transexitcode: 0
[2025-11-24 17:19:52] 2025-11-24 22:19:19,505 | INFO     | exeerrorcode: 0
[2025-11-24 17:19:52] 2025-11-24 22:19:19,505 | INFO     | exeerrordiag: 
[2025-11-24 17:19:52] 2025-11-24 22:19:19,505 | INFO     | exitcode: 0
[2025-11-24 17:19:52] 2025-11-24 22:19:19,505 | INFO     | exitmsg: OK
[2025-11-24 17:19:52] 2025-11-24 22:19:19,505 | INFO     | cpuconsumptiontime: 351207 s
[2025-11-24 17:19:52] 2025-11-24 22:19:19,505 | INFO     | nevents: 1000
[2025-11-24 17:19:52] 2025-11-24 22:19:19,506 | INFO     | neventsw: 0
[2025-11-24 17:19:52] 2025-11-24 22:19:19,506 | INFO     | pid: 30586
[2025-11-24 17:19:52] 2025-11-24 22:19:19,506 | INFO     | pgrp: 30586
[2025-11-24 17:19:52] 2025-11-24 22:19:19,506 | INFO     | corecount: 8
[2025-11-24 17:19:52] 2025-11-24 22:19:19,506 | INFO     | event service: False
[2025-11-24 17:19:52] 2025-11-24 22:19:19,507 | INFO     | sizes: {0: 2297978, 1: 2298834, 7: 2299096, 12: 2299124, 45261: 2345134, 45265: 2354919, 45268: 2355103, 45276: 2355349}
[2025-11-24 17:19:52] 2025-11-24 22:19:19,507 | INFO     | --------------------------------------------------
[2025-11-24 17:19:52] 2025-11-24 22:19:19,507 | INFO     | 
[2025-11-24 17:19:52] 2025-11-24 22:19:19,507 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-24 17:19:52] 2025-11-24 22:19:19,537 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,538 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,539 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,539 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,539 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,539 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,540 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,542 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,542 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,542 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 17:19:52] 2025-11-24 22:19:19,542 | INFO     | job 6895360357 has completed (purged errors)
[2025-11-24 17:19:52] 2025-11-24 22:19:19,543 | INFO     | overall cleanup function is called
[2025-11-24 17:19:52] 2025-11-24 22:19:20,562 | INFO     | --- collectZombieJob: --- 10, [30586]
[2025-11-24 17:19:52] 2025-11-24 22:19:20,562 | INFO     | zombie collector waiting for pid 30586
[2025-11-24 17:19:52] 2025-11-24 22:19:20,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 17:19:52] 2025-11-24 22:19:20,562 | INFO     | collected zombie processes
[2025-11-24 17:19:52] 2025-11-24 22:19:20,563 | INFO     | will attempt to kill all subprocesses of pid=30586
[2025-11-24 17:19:52] 2025-11-24 22:19:20,657 | INFO     | process IDs to be killed: [30586] (in reverse order)
[2025-11-24 17:19:52] 2025-11-24 22:19:20,715 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 17:19:52] 2025-11-24 22:19:20,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 17:19:52] 2025-11-24 22:19:20,721 | INFO     | did not find any defunct processes belonging to 30586
[2025-11-24 17:19:52] 2025-11-24 22:19:20,725 | INFO     | did not find any defunct processes belonging to 30586
[2025-11-24 17:19:52] 2025-11-24 22:19:20,727 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 17:19:52] 2025-11-24 22:19:20,727 | INFO     | ready for new job
[2025-11-24 17:19:52] 2025-11-24 22:19:20,728 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 17:19:52] 2025-11-24 22:19:20,731 | INFO     | ***************************************
[2025-11-24 17:19:52] 2025-11-24 22:19:20,731 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 17:19:52] 2025-11-24 22:19:20,732 | INFO     | ***************************************
[2025-11-24 17:19:52] 2025-11-24 22:19:20,732 | INFO     | 
[2025-11-24 17:19:52] 2025-11-24 22:19:20,732 | INFO     | architecture information:
[2025-11-24 17:19:52] 2025-11-24 22:19:20,733 | INFO     | executing command: cat /etc/os-release
[2025-11-24 17:19:52] 2025-11-24 22:19:20,751 | INFO     | cat /etc/os-release:
[2025-11-24 17:19:52] NAME="CentOS Linux"
[2025-11-24 17:19:52] VERSION="7 (Core)"
[2025-11-24 17:19:52] ID="centos"
[2025-11-24 17:19:52] ID_LIKE="rhel fedora"
[2025-11-24 17:19:52] VERSION_ID="7"
[2025-11-24 17:19:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 17:19:52] ANSI_COLOR="0;31"
[2025-11-24 17:19:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 17:19:52] HOME_URL="https://www.centos.org/"
[2025-11-24 17:19:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 17:19:52] 
[2025-11-24 17:19:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 17:19:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 17:19:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 17:19:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 17:19:52] 
[2025-11-24 17:19:52] 2025-11-24 22:19:20,752 | INFO     | ***************************************
[2025-11-24 17:19:52] 2025-11-24 22:19:21,255 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-24 17:19:52] 2025-11-24 22:19:21,276 | INFO     | sufficient remaining disk space (17430478848 B)
[2025-11-24 17:19:52] 2025-11-24 22:19:21,276 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 17:19:52] 2025-11-24 22:19:21,277 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 17:19:52] 2025-11-24 22:19:21,277 | INFO     | update_server=False
[2025-11-24 17:19:52] 2025-11-24 22:19:21,277 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 17:19:52] 2025-11-24 22:19:21,278 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:19:52] 2025-11-24 22:19:21,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 17:19:52] 2025-11-24 22:19:21,929 | INFO     | aborting loop
[2025-11-24 17:19:52] 2025-11-24 22:19:22,182 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 17:19:52] 2025-11-24 22:19:22,195 | INFO     | all data control threads have been joined
[2025-11-24 17:19:52] 2025-11-24 22:19:22,209 | INFO     | all job control threads have been joined
[2025-11-24 17:19:52] 2025-11-24 22:19:22,283 | INFO     | [job] retrieve thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:22,283 | INFO     | [job] queue monitor thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:22,289 | INFO     | [payload] validate_post thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:22,323 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:22,515 | INFO     | all payload control threads have been joined
[2025-11-24 17:19:52] 2025-11-24 22:19:22,605 | INFO     | [data] copytool_in thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:22,677 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 17:19:52] 2025-11-24 22:19:22,801 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:22,934 | INFO     | [job] job monitor thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:23,201 | INFO     | [data] control thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:23,215 | INFO     | [job] control thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:23,443 | INFO     | [payload] failed_post thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:23,520 | INFO     | [payload] control thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:23,546 | INFO     | [job] validate thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:23,559 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:24,188 | INFO     | [data] copytool_out thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:26,683 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:32,244 | INFO     | job.realtimelogging is not enabled
[2025-11-24 17:19:52] 2025-11-24 22:19:33,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 17:19:52] 2025-11-24 22:19:41,813 | INFO     | [monitor] cgroup control has ended
[2025-11-24 17:19:52] 2025-11-24 22:19:43,717 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394921260864)>', '<ExcThread(monitor, started 140393958078208)>']
[2025-11-24 17:19:52] 2025-11-24 22:19:48,743 | INFO     | all workflow threads have been joined
[2025-11-24 17:19:52] 2025-11-24 22:19:48,743 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 17:19:52] 2025-11-24 22:19:48,743 | INFO     | traces error code: 0
[2025-11-24 17:19:52] 2025-11-24 22:19:48,744 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 17:19:52] 2025-11-24 22:19:52,189 | INFO     | PID=24147 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 17:19:52] 2025-11-24 22:19:52,190 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 17:19:52] 2025-11-24 22:19:52,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 17:19:52] 2025-11-24 22:19:52,190 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 17:19:52] 2025-11-24 22:19:52,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 17:19:52] 2025-11-24 22:19:52,190 | INFO     | [monitor] control thread has ended
[2025-11-24 17:19:52] 2025-11-24 22:19:52,295 [wrapper] ==== pilot stdout END ====
[2025-11-24 17:19:52] 2025-11-24 22:19:52,300 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 17:19:52] 2025-11-24 22:19:52,305 [wrapper] pilotpid: 24147
[2025-11-24 17:19:52] 2025-11-24 22:19:52,309 [wrapper] Pilot exit status: 0
[2025-11-24 17:19:52] 2025-11-24 22:19:52,327 [wrapper] pandaids: 6895360357
[2025-11-24 17:19:52] 2025-11-24 22:19:52,371 [wrapper] cleanup supervisor_pilot 12502 24148
[2025-11-24 17:19:52] 2025-11-24 22:19:52,376 [wrapper] Test setup, not cleaning
[2025-11-24 17:19:52] 2025-11-24 22:19:52,381 [wrapper] apfmon messages muted
[2025-11-24 17:19:52] 2025-11-24 22:19:52,386 [wrapper] ==== wrapper stdout END ====
[2025-11-24 17:19:52] 2025-11-24 22:19:52,391 [wrapper] ==== wrapper stderr END ====
[2025-11-24 17:19:52]  *** Error codes and diagnostics ***
[2025-11-24 17:19:52]     "exeErrorCode": 0,
[2025-11-24 17:19:52]     "exeErrorDiag": "",
[2025-11-24 17:19:52]     "pilotErrorCode": 0,
[2025-11-24 17:19:52]     "pilotErrorDiag": "",
[2025-11-24 17:19:52]  *** Listing of results directory ***
[2025-11-24 17:19:52] total 1321260
[2025-11-24 17:19:52] -rwx------ 1 boincer umatlas     36292 Nov 23 08:42 runpilot2-wrapper.sh
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 23 08:42 queuedata.json
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 23 08:42 pilot3.tar.gz
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas       100 Nov 24 04:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 17:19:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 24 04:44 run_atlas
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas       105 Nov 24 04:44 job.xml
[2025-11-24 17:19:52] -rw-r--r-- 2 boincer umatlas 412457679 Nov 24 04:44 EVNT.47483658._000752.pool.root.1
[2025-11-24 17:19:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:44 start_atlas.sh
[2025-11-24 17:19:52] drwxrwx--x 2 boincer umatlas      4096 Nov 24 04:44 shared
[2025-11-24 17:19:52] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 04:44 input.tar.gz
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas         0 Nov 24 04:44 boinc_lockfile
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas      2785 Nov 24 04:44 pandaJob.out
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas        57 Nov 24 04:44 setup.sh.local
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas    989824 Nov 24 04:44 agis_schedconf.cvmfs.json
[2025-11-24 17:19:52] drwx------ 5 boincer umatlas      4096 Nov 24 04:44 pilot3
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas       532 Nov 24 17:08 boinc_task_state.xml
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas 920190772 Nov 24 17:18 HITS.47556137._007476.pool.root.1
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas      1063 Nov 24 17:19 memory_monitor_summary.json
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas   1516227 Nov 24 17:19 agis_ddmendpoints.agis.ALL.json
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas   1977898 Nov 24 17:19 log.47556137._007476.job.log.tgz.1
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas      8669 Nov 24 17:19 heartbeat.json
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas      5911 Nov 24 17:19 init_data.xml
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 24 17:19 boinc_mmap_file
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas        29 Nov 24 17:19 wrapper_checkpoint.txt
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas        95 Nov 24 17:19 pilot_heartbeat.json
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas       745 Nov 24 17:19 pilotlog.txt
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas   6227512 Nov 24 17:19 log.47556137._007476.job.log.1
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas       353 Nov 24 17:19 output.list
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas       620 Nov 24 17:19 runtime_log
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas   8222720 Nov 24 17:19 result.tar.gz
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas      9343 Nov 24 17:19 runtime_log.err
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas       668 Nov 24 17:19 6tkNDmgXPh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTwKKDmw2FJWn.diag
[2025-11-24 17:19:52] -rw-r--r-- 1 boincer umatlas     21287 Nov 24 17:19 stderr.txt
[2025-11-24 17:19:52] HITS file was successfully produced:
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas 920190772 Nov 24 17:18 shared/HITS.pool.root.1
[2025-11-24 17:19:52]  *** Contents of shared directory: ***
[2025-11-24 17:19:52] total 1310052
[2025-11-24 17:19:52] -rw-r--r-- 2 boincer umatlas 412457679 Nov 24 04:44 ATLAS.root_0
[2025-11-24 17:19:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 24 04:44 start_atlas.sh
[2025-11-24 17:19:52] -rw-r--r-- 2 boincer umatlas    590100 Nov 24 04:44 input.tar.gz
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas 920190772 Nov 24 17:18 HITS.pool.root.1
[2025-11-24 17:19:52] -rw------- 1 boincer umatlas   8222720 Nov 24 17:19 result.tar.gz
17:19:54 (20379): run_atlas exited; CPU time 348925.205864
17:19:54 (20379): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN